RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 A0A1W2PRU2 124 aa12.36□□□□□ -0.43
RAB11FIP3-211ENST00000495663 IL1R1P14778 569 aa12.36□□□□□ -0.43
RAB11FIP3-211ENST00000495663 EIF6P56537 245 aaKnown RBP12.36□□□□□ -0.43
RAB11FIP3-211ENST00000495663 CCDC158Q5M9N0 1113 aa12.36□□□□□ -0.43
RAB11FIP3-211ENST00000495663 RNF20Q5VTR2 975 aa12.36□□□□□ -0.43
RAB11FIP3-211ENST00000495663 CENPQQ7L2Z9 268 aaPredicted RBP12.36□□□□□ -0.43
RAB11FIP3-211ENST00000495663 WHAMMQ8TF30 809 aa12.36□□□□□ -0.43
RAB11FIP3-211ENST00000495663 DBNDD2Q9BQY9 259 aa12.36□□□□□ -0.43
RAB11FIP3-211ENST00000495663 GNL3LQ9NVN8 582 aaKnown RBP12.36□□□□□ -0.43
RAB11FIP3-211ENST00000495663 DBNLQ9UJU6 430 aaKnown RBP12.36□□□□□ -0.43
RAB11FIP3-211ENST00000495663 YDJCA8MPS7 323 aa12.35□□□□□ -0.43
RAB11FIP3-211ENST00000495663 FZD9O00144 591 aa12.35□□□□□ -0.43
RAB11FIP3-211ENST00000495663 FRAT2O75474 233 aaPredicted RBP12.35□□□□□ -0.43
RAB11FIP3-211ENST00000495663 PHKA1P46020 1223 aa12.35□□□□□ -0.43
RAB11FIP3-211ENST00000495663 ZNF385CQ66K41 422 aaPredicted RBP12.35□□□□□ -0.43
RAB11FIP3-211ENST00000495663 CCDC102BQ68D86 513 aa12.35□□□□□ -0.43
RAB11FIP3-211ENST00000495663 SVOPQ8N4V2 548 aa12.35□□□□□ -0.43
RAB11FIP3-211ENST00000495663 TDRD7Q8NHU6 1098 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP3-211ENST00000495663 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP3-211ENST00000495663 KDM2BQ8NHM5 1336 aa12.35□□□□□ -0.43
RAB11FIP3-211ENST00000495663 UQCRFS1P1P0C7P4 283 aa12.34□□□□□ -0.43
RAB11FIP3-211ENST00000495663 NUCB1Q02818 461 aa12.34□□□□□ -0.43
RAB11FIP3-211ENST00000495663 TTC39AQ5SRH9 613 aa12.34□□□□□ -0.43
RAB11FIP3-211ENST00000495663 CHD1LQ86WJ1 897 aa12.34□□□□□ -0.43
RAB11FIP3-211ENST00000495663 GPATCH3Q96I76 525 aa12.34□□□□□ -0.43
RAB11FIP3-211ENST00000495663 LNPKQ9C0E8 428 aa12.34□□□□□ -0.43
RAB11FIP3-211ENST00000495663 AKAP11Q9UKA4 1901 aa12.34□□□□□ -0.43
RAB11FIP3-211ENST00000495663 USP17L3A6NCW0 530 aa12.33□□□□□ -0.44
RAB11FIP3-211ENST00000495663 USP17L4A6NCW7 530 aa12.33□□□□□ -0.44
RAB11FIP3-211ENST00000495663 RAD17O75943 681 aa12.33□□□□□ -0.44
RAB11FIP3-211ENST00000495663 ARID4AP29374 1257 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP3-211ENST00000495663 CXCL9Q07325 125 aa12.33□□□□□ -0.44
RAB11FIP3-211ENST00000495663 TNIP1Q15025 636 aa12.33□□□□□ -0.44
RAB11FIP3-211ENST00000495663 TTLL5Q6EMB2 1281 aa12.33□□□□□ -0.44
RAB11FIP3-211ENST00000495663 CIAPIN1Q6FI81 312 aa12.33□□□□□ -0.44
RAB11FIP3-211ENST00000495663 USP17L1Q7RTZ2 530 aa12.33□□□□□ -0.44
RAB11FIP3-211ENST00000495663 DENND2AQ9ULE3 1009 aa12.33□□□□□ -0.44
RAB11FIP3-211ENST00000495663 IQSEC3Q9UPP2 1182 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP3-211ENST00000495663 GTF2IP78347 998 aa12.32□□□□□ -0.44
RAB11FIP3-211ENST00000495663 STRIP1Q5VSL9 837 aa12.32□□□□□ -0.44
RAB11FIP3-211ENST00000495663 C16orf71Q8IYS4 520 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP3-211ENST00000495663 GPC2Q8N158 579 aa12.32□□□□□ -0.44
RAB11FIP3-211ENST00000495663 ZNF512BQ96KM6 892 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP3-211ENST00000495663 ARHGEF10LQ9HCE6 1279 aa12.32□□□□□ -0.44
RAB11FIP3-211ENST00000495663 KCNQ5Q9NR82 932 aa12.32□□□□□ -0.44
RAB11FIP3-211ENST00000495663 RAB6BQ9NRW1 208 aa12.32□□□□□ -0.44
RAB11FIP3-211ENST00000495663 FAM205AQ6ZU69 1335 aa12.32□□□□□ -0.44
RAB11FIP3-211ENST00000495663 ZNF541Q9H0D2 1346 aa12.32□□□□□ -0.44
RAB11FIP3-211ENST00000495663 PSMD14O00487 310 aa12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 MX1P20591 662 aa12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 POU4F2Q12837 409 aa12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 CHAF1AQ13111 956 aaPredicted RBP12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 RASGRF1Q13972 1273 aa12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 RIPOR1Q6ZS17 1223 aa12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 CYP2U1Q7Z449 544 aa12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 OSBPL3Q9H4L5 887 aa12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 ECHDC1Q9NTX5 307 aa12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 GJA3Q9Y6H8 435 aa12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 COL1A1P02452 1464 aaPredicted RBP12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 PDS5AQ29RF7 1337 aaKnown RBP12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 TTC41PQ6P2S7 1318 aa12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 MYO3BQ8WXR4 1341 aa12.31□□□□□ -0.44
RAB11FIP3-211ENST00000495663 MYO5AQ9Y4I1 1855 aaKnown RBP12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 GLTPD2A6NH11 291 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 VIL1P09327 827 aaKnown RBP12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 SLURP2P0DP57 97 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 ATP5JP18859 108 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 MCAMP43121 646 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 FKBP1AP62942 108 aaKnown RBP12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 GAS6Q14393 721 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 DACT2Q5SW24 774 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 SPATA5Q8NB90 893 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 WDR66Q8TBY9 1149 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 TBC1D22AQ8WUA7 517 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 HMG20BQ9P0W2 317 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 JAG2Q9Y219 1238 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 WDR90Q96KV7 1748 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 SALL3Q9BXA9 1300 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 SCN4AP35499 1836 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 DOCK2Q92608 1830 aa12.3□□□□□ -0.44
RAB11FIP3-211ENST00000495663 GPR25O00155 361 aa12.29□□□□□ -0.44
RAB11FIP3-211ENST00000495663 ERC2O15083 957 aa12.29□□□□□ -0.44
RAB11FIP3-211ENST00000495663 DDNO94850 711 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP3-211ENST00000495663 RPS12P25398 132 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP3-211ENST00000495663 GPC1P35052 558 aa12.29□□□□□ -0.44
RAB11FIP3-211ENST00000495663 MCCD1P59942 119 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP3-211ENST00000495663 MFSD14BQ5SR56 506 aa12.29□□□□□ -0.44
RAB11FIP3-211ENST00000495663 ZGPATQ8N5A5 531 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP3-211ENST00000495663 OTUD7AQ8TE49 926 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP3-211ENST00000495663 MAST2Q6P0Q8 1798 aa12.28□□□□□ -0.44
RAB11FIP3-211ENST00000495663 GSK3AP49840 483 aa12.28□□□□□ -0.44
RAB11FIP3-211ENST00000495663 PDE1AP54750 535 aa12.28□□□□□ -0.44
RAB11FIP3-211ENST00000495663 PI16Q6UXB8 463 aa12.28□□□□□ -0.44
RAB11FIP3-211ENST00000495663 AGBL3Q8NEM8 1001 aa12.28□□□□□ -0.44
RAB11FIP3-211ENST00000495663 ZNF837Q96EG3 531 aaPredicted RBP12.28□□□□□ -0.44
RAB11FIP3-211ENST00000495663 GAS2L1Q99501 681 aaPredicted RBP12.28□□□□□ -0.44
RAB11FIP3-211ENST00000495663 BOLA2Q9H3K6 86 aa12.28□□□□□ -0.44
RAB11FIP3-211ENST00000495663 STAP2Q9UGK3 403 aa12.28□□□□□ -0.44
RAB11FIP3-211ENST00000495663 MYH7P12883 1935 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms