RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 DDX4Q9NQI0 724 aaKnown RBP10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 KCNQ5Q9NR82 932 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 IL17RBQ9NRM6 502 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 RTEL1Q9NZ71 1219 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 SWAP70Q9UH65 585 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 SERPINA10Q9UK55 444 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 RCOR1Q9UKL0 485 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 TAOK2Q9UL54 1235 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 COL4A5P29400 1685 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 BAZ2BQ9UIF8 2168 aaKnown RBP10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 COL2A1P02458 1487 aaPredicted RBP10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 YDJCA8MPS7 323 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 UBE2Q2LH0YL09 131 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 MMP1P03956 469 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 GUCY1A2P33402 732 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 GNAQP50148 359 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 RBM5P52756 815 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 CEBPZQ03701 1054 aaKnown RBP10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 GABPAQ06546 454 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 FUT2Q10981 343 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 STK38Q15208 465 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 KLHL34Q8N239 644 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 LARGE2Q8N3Y3 721 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 CCDC82Q8N4S0 544 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 PGBD1Q96JS3 809 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 FTOQ9C0B1 505 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 VPS33BQ9H267 617 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 DDX19AQ9NUU7 478 aaKnown RBP10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 POLR3EQ9NVU0 708 aa10.58□□□□□ -0.72
SMARCC1-208ENST00000492896 LIG1P18858 919 aa10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 U2AF2P26368 475 aaKnown RBP eCLIP10.57□□□□□ -0.729e-9■■□□□ 14.4
SMARCC1-208ENST00000492896 NASPP49321 788 aaPredicted RBP10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 ANO1Q5XXA6 986 aa10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 DIS3L2Q8IYB7 885 aaKnown RBP10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 KCNG4Q8TDN1 519 aa10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 TMEM47Q9BQJ4 181 aa10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 NUP62CLQ9H1M0 184 aa10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 EHD4Q9H223 541 aa10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 TSPY26PQ9H489 355 aa10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 ZNF277Q9NRM2 450 aaPredicted RBP10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 PIM2Q9P1W9 311 aa10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 SERPINB13Q9UIV8 391 aa10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 STX8Q9UNK0 236 aa10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 ATF5Q9Y2D1 282 aaPredicted RBP10.57□□□□□ -0.72
SMARCC1-208ENST00000492896 NPM3O75607 178 aaKnown RBP10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 TOP1P11387 765 aaKnown RBP10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 XRCC6P12956 609 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 ME1P48163 572 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 NFIAQ12857 509 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 SF3A1Q15459 793 aaKnown RBP10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 PKN1Q16512 942 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 CFAP100Q494V2 611 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 DALRD3Q5D0E6 543 aaKnown RBP10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 RSBN1LQ6PCB5 846 aaPredicted RBP10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 CCDC73Q6ZRK6 1079 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 NOSTRINQ8IVI9 506 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 NIM1KQ8IY84 436 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 SRBD1Q8N5C6 995 aaKnown RBP10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 LINC00301Q8NCQ3 95 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 CEP95Q96GE4 821 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 IDI2Q9BXS1 227 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 FOXP1Q9H334 677 aaPredicted RBP10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 BRMS1Q9HCU9 246 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 VPS54Q9P1Q0 977 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 KCNJ14Q9UNX9 436 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 CLIC4Q9Y696 253 aa10.56□□□□□ -0.72
SMARCC1-208ENST00000492896 SPTLC2O15270 562 aa10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 SCG2P13521 617 aa10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 AKR1B1P15121 316 aa10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 KRT2P35908 639 aa10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 NOVP48745 357 aa10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 R3HDM1Q15032 1099 aaKnown RBP10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 CCAR1Q8IX12 1150 aaKnown RBP10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 LZTS2Q9BRK4 669 aa10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 PHF20Q9BVI0 1012 aa10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 DHX36Q9H2U1 1008 aaKnown RBP10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 CLSTN2Q9H4D0 955 aa10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 DACT1Q9NYF0 836 aa10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 TMOD2Q9NZR1 351 aa10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 HDAC9Q9UKV0 1011 aa10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 PCDHAC2Q9Y5I4 1007 aa10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 V9GY48 417 aaPredicted RBP10.55□□□□□ -0.72
SMARCC1-208ENST00000492896 IGKV6D-41A0A0C4DH26 115 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 A0A1W2PQ27 194 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 A0A1W2PQ64 194 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 A0A1W2PQD8 194 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 hCG_1642624A0A1W2PR95 340 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 BTBD18B2RXH4 712 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 PSMD14O00487 310 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 ENTPD3O75355 529 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 RAD17O75943 681 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 VIL1P09327 827 aaKnown RBP10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 SHMT1P34896 483 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 CACNB3P54284 484 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 MAP3K11Q16584 847 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 PFKFB3Q16875 520 aaPredicted RBP10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 PPP4R3BQ5MIZ7 849 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 JMYQ8N9B5 988 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 FSIP1Q8NA03 581 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms