RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 IFIT3O14879 490 aaKnown RBP16.07■□□□□ 0.16
COL16A1-214ENST00000488128 N4BP3O15049 544 aa16.07■□□□□ 0.16
COL16A1-214ENST00000488128 SYF2O95926 243 aaKnown RBP16.07■□□□□ 0.16
COL16A1-214ENST00000488128 SARSP49591 514 aaKnown RBP16.07■□□□□ 0.16
COL16A1-214ENST00000488128 SSRP1Q08945 709 aaKnown RBP16.07■□□□□ 0.16
COL16A1-214ENST00000488128 DPYDQ12882 1025 aa16.07■□□□□ 0.16
COL16A1-214ENST00000488128 FBXL16Q8N461 479 aa16.07■□□□□ 0.16
COL16A1-214ENST00000488128 FAM71BQ8TC56 605 aa16.07■□□□□ 0.16
COL16A1-214ENST00000488128 TAB2Q9NYJ8 693 aa16.07■□□□□ 0.16
COL16A1-214ENST00000488128 ADD3Q9UEY8 706 aaKnown RBP16.07■□□□□ 0.16
COL16A1-214ENST00000488128 DACH1Q9UI36 760 aa16.07■□□□□ 0.16
COL16A1-214ENST00000488128 SLC12A7Q9Y666 1083 aa16.07■□□□□ 0.16
COL16A1-214ENST00000488128 DCCP43146 1447 aa16.07■□□□□ 0.16
COL16A1-214ENST00000488128 CCDC57Q2TAC2 916 aa16.06■□□□□ 0.16
COL16A1-214ENST00000488128 CTNND2Q9UQB3 1225 aa16.06■□□□□ 0.16
COL16A1-214ENST00000488128 FAM237AA0A1B0GTK4 181 aa16.06■□□□□ 0.16
COL16A1-214ENST00000488128 ACTN4O43707 911 aaKnown RBP16.06■□□□□ 0.16
COL16A1-214ENST00000488128 PTPREP23469 700 aa16.06■□□□□ 0.16
COL16A1-214ENST00000488128 MMS19Q96T76 1030 aa16.06■□□□□ 0.16
COL16A1-214ENST00000488128 ZSWIM5Q9P217 1185 aa16.06■□□□□ 0.16
COL16A1-214ENST00000488128 SLAIN2Q9P270 581 aa16.06■□□□□ 0.16
COL16A1-214ENST00000488128 BAZ2BQ9UIF8 2168 aaKnown RBP16.06■□□□□ 0.16
COL16A1-214ENST00000488128 ASAP1Q9ULH1 1129 aa16.06■□□□□ 0.16
COL16A1-214ENST00000488128 NWD2Q9ULI1 1742 aa16.06■□□□□ 0.16
COL16A1-214ENST00000488128 MYBL2P10244 700 aa16.05■□□□□ 0.16
COL16A1-214ENST00000488128 SAFBQ15424 915 aaKnown RBP eCLIP16.05■□□□□ 0.16
COL16A1-214ENST00000488128 AFAP1L1Q8TED9 768 aa16.05■□□□□ 0.16
COL16A1-214ENST00000488128 GGCXP38435 758 aa16.05■□□□□ 0.16
COL16A1-214ENST00000488128 ARHGAP25P42331 645 aa16.05■□□□□ 0.16
COL16A1-214ENST00000488128 CCT5P48643 541 aa16.05■□□□□ 0.16
COL16A1-214ENST00000488128 CORO7P57737 925 aa16.05■□□□□ 0.16
COL16A1-214ENST00000488128 DNAJC10Q8IXB1 793 aa16.05■□□□□ 0.16
COL16A1-214ENST00000488128 AFDNP55196 1824 aaKnown RBP16.05■□□□□ 0.16
COL16A1-214ENST00000488128 POTEB2H3BUK9 544 aa16.05■□□□□ 0.16
COL16A1-214ENST00000488128 ZNF185O15231 689 aa16.05■□□□□ 0.16
COL16A1-214ENST00000488128 KRT9P35527 623 aa16.05■□□□□ 0.16
COL16A1-214ENST00000488128 MCAMP43121 646 aa16.05■□□□□ 0.16
COL16A1-214ENST00000488128 IGDCC4Q8TDY8 1250 aa16.05■□□□□ 0.16
COL16A1-214ENST00000488128 SMARCC1Q92922 1105 aaPredicted RBP16.05■□□□□ 0.16
COL16A1-214ENST00000488128 LY9Q9HBG7 655 aa16.05■□□□□ 0.16
COL16A1-214ENST00000488128 ARFGEF2Q9Y6D5 1785 aa16.04■□□□□ 0.16
COL16A1-214ENST00000488128 GPTP24298 496 aa16.04■□□□□ 0.16
COL16A1-214ENST00000488128 SPATA1Q5VX52 437 aa16.04■□□□□ 0.16
COL16A1-214ENST00000488128 CCDC148Q8NFR7 591 aa16.04■□□□□ 0.16
COL16A1-214ENST00000488128 TMOD3Q9NYL9 352 aa16.04■□□□□ 0.16
COL16A1-214ENST00000488128 WWC3Q9ULE0 1092 aa16.04■□□□□ 0.16
COL16A1-214ENST00000488128 WNT7AO00755 349 aa16.04■□□□□ 0.16
COL16A1-214ENST00000488128 MYO1BO43795 1136 aa16.04■□□□□ 0.16
COL16A1-214ENST00000488128 MMP1P03956 469 aa16.04■□□□□ 0.16
COL16A1-214ENST00000488128 ATP1A1P05023 1023 aaKnown RBP16.04■□□□□ 0.16
COL16A1-214ENST00000488128 FILIP1LQ4L180 1135 aa16.04■□□□□ 0.16
COL16A1-214ENST00000488128 CTR9Q6PD62 1173 aa16.04■□□□□ 0.16
COL16A1-214ENST00000488128 PRDM1O75626 825 aa16.03■□□□□ 0.16
COL16A1-214ENST00000488128 PIP4K2BP78356 416 aa16.03■□□□□ 0.16
COL16A1-214ENST00000488128 EARS2Q5JPH6 523 aaKnown RBP16.03■□□□□ 0.16
COL16A1-214ENST00000488128 PPM1EQ8WY54 764 aa16.03■□□□□ 0.16
COL16A1-214ENST00000488128 ABHD10Q9NUJ1 306 aa16.03■□□□□ 0.16
COL16A1-214ENST00000488128 GLI3P10071 1580 aa16.03■□□□□ 0.16
COL16A1-214ENST00000488128 KRT31Q15323 416 aa16.03■□□□□ 0.16
COL16A1-214ENST00000488128 NT5DC1Q5TFE4 455 aa16.03■□□□□ 0.16
COL16A1-214ENST00000488128 CARD10Q9BWT7 1032 aa16.03■□□□□ 0.16
COL16A1-214ENST00000488128 MKRN1Q9UHC7 482 aaKnown RBP16.03■□□□□ 0.16
COL16A1-214ENST00000488128 TACC3Q9Y6A5 838 aa16.03■□□□□ 0.16
COL16A1-214ENST00000488128 ZNF532Q9HCE3 1301 aa16.02■□□□□ 0.16
COL16A1-214ENST00000488128 SNAP23O00161 211 aa16.02■□□□□ 0.16
COL16A1-214ENST00000488128 CNGA4Q8IV77 575 aa16.02■□□□□ 0.16
COL16A1-214ENST00000488128 TTF2Q9UNY4 1162 aaKnown RBP16.02■□□□□ 0.16
COL16A1-214ENST00000488128 COL5A2P05997 1499 aaPredicted RBP16.02■□□□□ 0.16
COL16A1-214ENST00000488128 PPFIA4O75335 1185 aa16.02■□□□□ 0.15
COL16A1-214ENST00000488128 ZFYP08048 801 aaPredicted RBP16.02■□□□□ 0.15
COL16A1-214ENST00000488128 TCIRG1Q13488 830 aa16.02■□□□□ 0.15
COL16A1-214ENST00000488128 NKX1-1Q15270 411 aaPredicted RBP16.02■□□□□ 0.15
COL16A1-214ENST00000488128 FBXW10Q5XX13 1052 aa16.02■□□□□ 0.15
COL16A1-214ENST00000488128 SYMPKQ92797 1274 aaKnown RBP16.02■□□□□ 0.15
COL16A1-214ENST00000488128 GBP3Q9H0R5 595 aa16.02■□□□□ 0.15
COL16A1-214ENST00000488128 KAT14Q9H8E8 782 aa16.02■□□□□ 0.15
COL16A1-214ENST00000488128 GPR108Q9NPR9 543 aa16.02■□□□□ 0.15
COL16A1-214ENST00000488128 PIH1D3Q9NQM4 214 aaKnown RBP16.02■□□□□ 0.15
COL16A1-214ENST00000488128 VPS54Q9P1Q0 977 aa16.02■□□□□ 0.15
COL16A1-214ENST00000488128 SAMM50Q9Y512 469 aa16.02■□□□□ 0.15
COL16A1-214ENST00000488128 ZNF335Q9H4Z2 1342 aaPredicted RBP16.02■□□□□ 0.15
COL16A1-214ENST00000488128 PBX1P40424 430 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 MATR3P43243 847 aaKnown RBP eCLIP16.01■□□□□ 0.15
COL16A1-214ENST00000488128 CUL4BQ13620 913 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 WHAMMP3Q1A5X7 153 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 HELBQ8NG08 1087 aaPredicted RBP16.01■□□□□ 0.15
COL16A1-214ENST00000488128 PIGBQ92521 554 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 PAGE5Q96GU1 130 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 PSMB7Q99436 277 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 HPCAL4Q9UM19 191 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 DUSP10Q9Y6W6 482 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 PKD1L3Q7Z443 1732 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 ERCC5P28715 1186 aaPredicted RBP16.01■□□□□ 0.15
COL16A1-214ENST00000488128 STIM1Q13586 685 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 ZNF174Q15697 407 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 RRAGBQ5VZM2 374 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 CAGE1Q8TC20 777 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 NAA15Q9BXJ9 866 aaKnown RBP16.01■□□□□ 0.15
COL16A1-214ENST00000488128 DEF6Q9H4E7 631 aa16.01■□□□□ 0.15
COL16A1-214ENST00000488128 REXO2Q9Y3B8 237 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms