RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 KRBA2Q6ZNG9 492 aa12.39□□□□□ -0.43
HDAC6-228ENST00000486227 ISCA1Q9BUE6 129 aa12.39□□□□□ -0.43
HDAC6-228ENST00000486227 XDHP47989 1333 aa12.38□□□□□ -0.43
HDAC6-228ENST00000486227 UIMC1Q96RL1 719 aa12.38□□□□□ -0.43
HDAC6-228ENST00000486227 TUBBP07437 444 aa12.38□□□□□ -0.43
HDAC6-228ENST00000486227 NOP2P46087 812 aaKnown RBP12.38□□□□□ -0.43
HDAC6-228ENST00000486227 SV2BQ7L1I2 683 aa12.38□□□□□ -0.43
HDAC6-228ENST00000486227 GPHNQ9NQX3 736 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-228ENST00000486227 DIP2AQ14689 1571 aa12.38□□□□□ -0.43
HDAC6-228ENST00000486227 KCNQ2O43526 872 aa12.38□□□□□ -0.43
HDAC6-228ENST00000486227 ZFP91Q96JP5 570 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-228ENST00000486227 IMPACTQ9P2X3 320 aa12.38□□□□□ -0.43
HDAC6-228ENST00000486227 LEMD3Q9Y2U8 911 aa12.38□□□□□ -0.43
HDAC6-228ENST00000486227 CTAGE15A4D2H0 777 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 NEBLO76041 1014 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 CTAGE8P0CG41 777 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 PFKFB1P16118 471 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 CCT6AP40227 531 aaKnown RBP12.37□□□□□ -0.43
HDAC6-228ENST00000486227 CTAGE6Q86UF2 777 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 CTAGE4Q8IX94 777 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 BICD1Q96G01 975 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 PCDHA7Q9UN72 937 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 JCADQ9P266 1359 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 BICDL2A1A5D9 508 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 GOLGA8HP0CJ92 632 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 CYLC1P35663 651 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-228ENST00000486227 MNAT1P51948 309 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 KRT25Q7Z3Z0 450 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 TMC4Q7Z404 712 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 LZTS2Q9BRK4 669 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 ATP8A2Q9NTI2 1148 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 ZNF215Q9UL58 517 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-228ENST00000486227 NLRP12P59046 1061 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 CLEC4GQ6UXB4 293 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 SEMA3EO15041 775 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 FANCCQ00597 558 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 POSTNQ15063 836 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 JADE2Q9NQC1 790 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 CTNND2Q9UQB3 1225 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-228ENST00000486227 CSADQ9Y600 493 aa12.37□□□□□ -0.43
HDAC6-228ENST00000486227 POLR1AO95602 1720 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-228ENST00000486227 VGLL3A8MV65 326 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 ADCY7P51828 1080 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 PDE4DQ08499 809 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 FERMT2Q96AC1 680 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 ALS2CR12Q96Q35 445 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 PKD2L1Q9P0L9 805 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 VPS18Q9P253 973 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 SERTAD1Q9UHV2 236 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 CLIC4Q9Y696 253 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 GOLGA6L7A0A1B0GV03 622 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 TMCO5BA8MYB1 307 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 RPS6KA4O75676 772 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 FOXO4P98177 505 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 LRMPQ12912 555 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 MLKLQ8NB16 471 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 VPS16Q9H269 839 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 ZBTB21Q9ULJ3 1066 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 NFE2L3Q9Y4A8 694 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 MROH2AA6NES4 1674 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 CYP2D7A0A087X1C5 515 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 CCDC175P0C221 793 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 CETN2P41208 172 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 ARID5AQ03989 594 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 PNOCQ13519 176 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 REXO1Q8N1G1 1221 aaKnown RBP12.36□□□□□ -0.43
HDAC6-228ENST00000486227 ZSWIM5Q9P217 1185 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 KIAA1468Q9P260 1216 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 LRWD1Q9UFC0 647 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 SPATA31D1Q6ZQQ2 1576 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 SMCO2A6NFE2 343 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 KLRF2D3W0D1 207 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 FAM13AO94988 1023 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 NBPF11Q86T75 865 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 CLIC6Q96NY7 704 aa12.36□□□□□ -0.43
HDAC6-228ENST00000486227 BBOX1O75936 387 aa12.35□□□□□ -0.43
HDAC6-228ENST00000486227 CYP2E1P05181 493 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-228ENST00000486227 KARSQ15046 597 aaKnown RBP12.35□□□□□ -0.43
HDAC6-228ENST00000486227 CCDC174Q6PII3 467 aa12.35□□□□□ -0.43
HDAC6-228ENST00000486227 FTOQ9C0B1 505 aaKnown RBP eCLIP12.35□□□□□ -0.43
HDAC6-228ENST00000486227 CARMIL3Q8ND23 1372 aa12.35□□□□□ -0.43
HDAC6-228ENST00000486227 BRDTQ58F21 947 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-228ENST00000486227 SULF1Q8IWU6 871 aa12.35□□□□□ -0.43
HDAC6-228ENST00000486227 GPKOWQ92917 476 aaPredicted RBP eCLIP12.35□□□□□ -0.434e-7■□□□□ 8.7
HDAC6-228ENST00000486227 BSDC1Q9NW68 430 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-228ENST00000486227 ATP10DQ9P241 1426 aa12.35□□□□□ -0.43
HDAC6-228ENST00000486227 SCG2P13521 617 aa12.35□□□□□ -0.43
HDAC6-228ENST00000486227 NCBP1Q09161 790 aaKnown RBP12.35□□□□□ -0.43
HDAC6-228ENST00000486227 USH1GQ495M9 461 aa12.35□□□□□ -0.43
HDAC6-228ENST00000486227 LRRC47Q8N1G4 583 aaKnown RBP12.35□□□□□ -0.43
HDAC6-228ENST00000486227 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.35□□□□□ -0.43
HDAC6-228ENST00000486227 DRC1Q96MC2 740 aa12.35□□□□□ -0.43
HDAC6-228ENST00000486227 STRBPQ96SI9 672 aaKnown RBP12.35□□□□□ -0.43
HDAC6-228ENST00000486227 LUC7L2Q9Y383 392 aaKnown RBP12.35□□□□□ -0.43
HDAC6-228ENST00000486227 TMEM131LA2VDJ0 1609 aa12.35□□□□□ -0.43
HDAC6-228ENST00000486227 BACH1O14867 736 aa12.35□□□□□ -0.43
HDAC6-228ENST00000486227 SP4Q02446 784 aa12.35□□□□□ -0.43
HDAC6-228ENST00000486227 TRIM28Q13263 835 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms