RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 FECHP22830 423 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 GPTP24298 496 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 NKX1-1Q15270 411 aaPredicted RBP14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 RRP12Q5JTH9 1297 aaKnown RBP14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 SLC35F6Q8N357 371 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 ACRBPQ8NEB7 543 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 PAGE5Q96GU1 130 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 AK7Q96M32 723 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 CDC5LQ99459 802 aaKnown RBP14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 ABCB6Q9NP58 842 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 L1RE1Q9UN81 338 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 ANKRD18BA2A2Z9 1011 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 PPP1R3GB7ZBB8 358 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 CTSWP56202 376 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 DPYDQ12882 1025 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 KIF4BQ2VIQ3 1234 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 MFSD6Q6ZSS7 791 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 MAGEB6Q8N7X4 407 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 KRT23Q9C075 422 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 CNNM2Q9H8M5 875 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 AATFQ9NY61 560 aaKnown RBP eCLIP14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 LCMT1Q9UIC8 334 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 CEP131Q9UPN4 1083 aa14.76□□□□□ -0.05
PDZRN3-205ENST00000466780 N4BP1O75113 896 aaKnown RBP14.75□□□□□ -0.05
PDZRN3-205ENST00000466780 WTAPQ15007 396 aa14.75□□□□□ -0.05
PDZRN3-205ENST00000466780 HLFQ16534 295 aa14.75□□□□□ -0.05
PDZRN3-205ENST00000466780 EARS2Q5JPH6 523 aaKnown RBP14.75□□□□□ -0.05
PDZRN3-205ENST00000466780 CT47A1Q5JQC4 288 aaPredicted RBP14.75□□□□□ -0.05
PDZRN3-205ENST00000466780 KIF6Q6ZMV9 814 aa14.75□□□□□ -0.05
PDZRN3-205ENST00000466780 HDXQ7Z353 690 aa14.75□□□□□ -0.05
PDZRN3-205ENST00000466780 GOLGA5Q8TBA6 731 aa14.75□□□□□ -0.05
PDZRN3-205ENST00000466780 ERVK-24P63145 666 aa14.75□□□□□ -0.05
PDZRN3-205ENST00000466780 WWC2Q6AWC2 1192 aa14.75□□□□□ -0.05
PDZRN3-205ENST00000466780 NLRP10Q86W26 655 aa14.75□□□□□ -0.05
PDZRN3-205ENST00000466780 TSPYL1Q9H0U9 437 aa14.75□□□□□ -0.05
PDZRN3-205ENST00000466780 VPS18Q9P253 973 aa14.75□□□□□ -0.05
PDZRN3-205ENST00000466780 CTAGE9A4FU28 777 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 POTEB2H3BUK9 544 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 RNF225M0QZC1 329 aaPredicted RBP14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 WNT7AO00755 349 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 COBLO75128 1261 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 UQCRFS1P1P0C7P4 283 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 VSNL1P62760 191 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 DNAJC10Q8IXB1 793 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 FANCBQ8NB91 859 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 HELBQ8NG08 1087 aaPredicted RBP14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 STAG1Q8WVM7 1258 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 RHOXF2BP0C7M4 288 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 ARHGAP25P42331 645 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 GIGYF2Q6Y7W6 1299 aaKnown RBP14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 NUP133Q8WUM0 1156 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 SYMPKQ92797 1274 aaKnown RBP14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 RHOXF2Q9BQY4 288 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 TOMM22Q9NS69 142 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 MYH8P13535 1937 aa14.74□□□□□ -0.05
PDZRN3-205ENST00000466780 BCL9LQ86UU0 1499 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 TRIM75PA6NK02 468 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 ACTN2P35609 894 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 TUBB2AQ13885 445 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 CNGA4Q8IV77 575 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 ZNF654Q8IZM8 581 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 MSL3Q8N5Y2 521 aaKnown RBP14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 SPATA5Q8NB90 893 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 CTAGE1Q96RT6 745 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 TUBB2BQ9BVA1 445 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 ITIH6Q6UXX5 1313 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 SEMA3EO15041 775 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 FGFR2P21802 821 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 CDC25AP30304 524 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 RASGRF1Q13972 1273 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 LCORLQ8N3X6 602 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 IQUBQ8NA54 791 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 TMOD3Q9NYL9 352 aa14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 TTF2Q9UNY4 1162 aaKnown RBP14.73□□□□□ -0.05
PDZRN3-205ENST00000466780 SNAP23O00161 211 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 IRS4O14654 1257 aaPredicted RBP14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 CCT6AP40227 531 aaKnown RBP14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 SART3Q15020 963 aaKnown RBP14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 FILIP1LQ4L180 1135 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 CCDC51Q96ER9 411 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 GSDMAQ96QA5 445 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 NAPGQ99747 312 aaPredicted RBP14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 TRIM34Q9BYJ4 488 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 VPS54Q9P1Q0 977 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 CCDC196A0A1B0GTZ2 297 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 ERLIN1O75477 346 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 MAP3K12Q12852 859 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 NOA1Q8NC60 698 aaKnown RBP14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 STAMQ92783 540 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 CARD10Q9BWT7 1032 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 CTNND2Q9UQB3 1225 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 FAN1Q9Y2M0 1017 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 MYO1CO00159 1063 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 TRIM66O15016 1216 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 TDO2P48775 406 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 AMPD2Q01433 879 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 KRT31Q15323 416 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 PUM3Q15397 648 aaKnown RBP14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 PKN1Q16512 942 aa14.72□□□□□ -0.05
PDZRN3-205ENST00000466780 NOM1Q5C9Z4 860 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms