RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 MAP2K1Q02750 393 aaPredicted RBP22.47■■□□□ 1.19
LMNB1-204ENST00000463908 SREBF2Q12772 1141 aa22.47■■□□□ 1.19
LMNB1-204ENST00000463908 IMMTQ16891 758 aaKnown RBP22.47■■□□□ 1.19
LMNB1-204ENST00000463908 PRRT2Q7Z6L0 340 aaPredicted RBP22.47■■□□□ 1.19
LMNB1-204ENST00000463908 IFNL1Q8IU54 200 aa22.47■■□□□ 1.19
LMNB1-204ENST00000463908 CLEC10AQ8IUN9 316 aa22.47■■□□□ 1.19
LMNB1-204ENST00000463908 STAG1Q8WVM7 1258 aa22.47■■□□□ 1.19
LMNB1-204ENST00000463908 ANO2Q9NQ90 1003 aa22.47■■□□□ 1.19
LMNB1-204ENST00000463908 RBM8AQ9Y5S9 174 aaKnown RBP22.47■■□□□ 1.19
LMNB1-204ENST00000463908 TAF6LQ9Y6J9 622 aa22.47■■□□□ 1.19
LMNB1-204ENST00000463908 IGKV6D-41A0A0C4DH26 115 aa22.46■■□□□ 1.19
LMNB1-204ENST00000463908 CYP21A2P08686 494 aa22.46■■□□□ 1.19
LMNB1-204ENST00000463908 LBX1P52954 281 aa22.46■■□□□ 1.19
LMNB1-204ENST00000463908 BACE1P56817 501 aa22.46■■□□□ 1.19
LMNB1-204ENST00000463908 DGKZQ13574 1117 aa22.46■■□□□ 1.19
LMNB1-204ENST00000463908 GPAT2Q6NUI2 795 aa22.46■■□□□ 1.19
LMNB1-204ENST00000463908 MFSD6Q6ZSS7 791 aa22.46■■□□□ 1.19
LMNB1-204ENST00000463908 NEDD1Q8NHV4 660 aa22.46■■□□□ 1.19
LMNB1-204ENST00000463908 RNF186Q9NXI6 227 aa22.46■■□□□ 1.19
LMNB1-204ENST00000463908 NECTIN1Q15223 517 aa22.45■■□□□ 1.18
LMNB1-204ENST00000463908 SH3D19Q5HYK7 790 aa22.45■■□□□ 1.18
LMNB1-204ENST00000463908 FAM43AQ8N2R8 423 aa22.45■■□□□ 1.18
LMNB1-204ENST00000463908 KANSL2Q9H9L4 492 aa22.45■■□□□ 1.18
LMNB1-204ENST00000463908 BTBD19C9JJ37 291 aa22.44■■□□□ 1.18
LMNB1-204ENST00000463908 USP17L10C9JJH3 530 aa22.44■■□□□ 1.18
LMNB1-204ENST00000463908 MTMR2Q13614 643 aa22.44■■□□□ 1.18
LMNB1-204ENST00000463908 IL17RBQ9NRM6 502 aa22.44■■□□□ 1.18
LMNB1-204ENST00000463908 EMILIN3Q9NT22 766 aa22.44■■□□□ 1.18
LMNB1-204ENST00000463908 NEDD4P46934 1319 aa22.43■■□□□ 1.18
LMNB1-204ENST00000463908 C19orf81C9J6K1 198 aa22.43■■□□□ 1.18
LMNB1-204ENST00000463908 RANBP6O60518 1105 aaKnown RBP22.43■■□□□ 1.18
LMNB1-204ENST00000463908 HSPA8P11142 646 aaKnown RBP22.43■■□□□ 1.18
LMNB1-204ENST00000463908 EEF2P13639 858 aaKnown RBP22.43■■□□□ 1.18
LMNB1-204ENST00000463908 HMGCS2P54868 508 aa22.43■■□□□ 1.18
LMNB1-204ENST00000463908 RRP12Q5JTH9 1297 aaKnown RBP22.43■■□□□ 1.18
LMNB1-204ENST00000463908 RNF41Q9H4P4 317 aaPredicted RBP22.43■■□□□ 1.18
LMNB1-204ENST00000463908 TRPA1O75762 1119 aa22.42■■□□□ 1.18
LMNB1-204ENST00000463908 TSPY3P0CV98 308 aa22.42■■□□□ 1.18
LMNB1-204ENST00000463908 TSPY8P0CW00 308 aa22.42■■□□□ 1.18
LMNB1-204ENST00000463908 PCP11498 1178 aaKnown RBP22.42■■□□□ 1.18
LMNB1-204ENST00000463908 ICA1Q05084 483 aa22.42■■□□□ 1.18
LMNB1-204ENST00000463908 FASTKD5Q7L8L6 764 aaKnown RBP22.42■■□□□ 1.18
LMNB1-204ENST00000463908 CEP95Q96GE4 821 aa22.42■■□□□ 1.18
LMNB1-204ENST00000463908 KIAA1683Q9H0B3 1180 aa22.42■■□□□ 1.18
LMNB1-204ENST00000463908 TOMM22Q9NS69 142 aa22.42■■□□□ 1.18
LMNB1-204ENST00000463908 MTMR4Q9NYA4 1195 aa22.42■■□□□ 1.18
LMNB1-204ENST00000463908 PLIN4Q96Q06 1357 aa22.41■■□□□ 1.18
LMNB1-204ENST00000463908 TSPY2A6NKD2 308 aa22.41■■□□□ 1.18
LMNB1-204ENST00000463908 NMT2O60551 498 aa22.41■■□□□ 1.18
LMNB1-204ENST00000463908 KIAA1755Q5JYT7 1200 aa22.41■■□□□ 1.18
LMNB1-204ENST00000463908 TREML2Q5T2D2 321 aa22.41■■□□□ 1.18
LMNB1-204ENST00000463908 GADL1Q6ZQY3 521 aa22.41■■□□□ 1.18
LMNB1-204ENST00000463908 STOX1Q6ZVD7 989 aa22.41■■□□□ 1.18
LMNB1-204ENST00000463908 ANKRD23Q86SG2 305 aa22.41■■□□□ 1.18
LMNB1-204ENST00000463908 R3HDMLQ9H3Y0 253 aa22.41■■□□□ 1.18
LMNB1-204ENST00000463908 NYAP2Q9P242 653 aa22.41■■□□□ 1.18
LMNB1-204ENST00000463908 TMX2Q9Y320 296 aa22.41■■□□□ 1.18
LMNB1-204ENST00000463908 GREB1LQ9C091 1923 aaPredicted RBP22.41■■□□□ 1.18
LMNB1-204ENST00000463908 MYH8P13535 1937 aa22.4■■□□□ 1.18
LMNB1-204ENST00000463908 SLC27A2O14975 620 aa22.4■■□□□ 1.18
LMNB1-204ENST00000463908 ZYXQ15942 572 aaKnown RBP22.4■■□□□ 1.18
LMNB1-204ENST00000463908 CREB3L3Q68CJ9 461 aa22.4■■□□□ 1.18
LMNB1-204ENST00000463908 USP17L2Q6R6M4 530 aa22.4■■□□□ 1.18
LMNB1-204ENST00000463908 PROCA1Q8NCQ7 364 aaPredicted RBP22.4■■□□□ 1.18
LMNB1-204ENST00000463908 MKL1Q969V6 931 aa22.4■■□□□ 1.18
LMNB1-204ENST00000463908 B4E1Z4 1266 aa22.39■■□□□ 1.17
LMNB1-204ENST00000463908 E7EWF7 191 aa22.39■■□□□ 1.17
LMNB1-204ENST00000463908 PDHXO00330 501 aa22.39■■□□□ 1.17
LMNB1-204ENST00000463908 NOVP48745 357 aa22.39■■□□□ 1.17
LMNB1-204ENST00000463908 OTUD7BQ6GQQ9 843 aa22.39■■□□□ 1.17
LMNB1-204ENST00000463908 C12orf42Q96LP6 360 aa22.39■■□□□ 1.17
LMNB1-204ENST00000463908 TCP11L1Q9NUJ3 509 aa22.39■■□□□ 1.17
LMNB1-204ENST00000463908 ZSWIM5Q9P217 1185 aa22.39■■□□□ 1.17
LMNB1-204ENST00000463908 CLIP2Q9UDT6 1046 aa22.39■■□□□ 1.17
LMNB1-204ENST00000463908 KDM4AO75164 1064 aa22.38■■□□□ 1.17
LMNB1-204ENST00000463908 TBC1D8O95759 1140 aa22.38■■□□□ 1.17
LMNB1-204ENST00000463908 ALDH1A1P00352 501 aa22.38■■□□□ 1.17
LMNB1-204ENST00000463908 ATP2B2Q01814 1243 aa22.38■■□□□ 1.17
LMNB1-204ENST00000463908 ESR2Q92731 530 aa22.38■■□□□ 1.17
LMNB1-204ENST00000463908 FEZ1Q99689 392 aa22.38■■□□□ 1.17
LMNB1-204ENST00000463908 BEGAINQ9BUH8 593 aa22.38■■□□□ 1.17
LMNB1-204ENST00000463908 ARHGEF10LQ9HCE6 1279 aa22.38■■□□□ 1.17
LMNB1-204ENST00000463908 SAGE1Q9NXZ1 904 aa22.38■■□□□ 1.17
LMNB1-204ENST00000463908 TMOD4Q9NZQ9 345 aa22.38■■□□□ 1.17
LMNB1-204ENST00000463908 TSKSQ9UJT2 592 aa22.38■■□□□ 1.17
LMNB1-204ENST00000463908 AGTPBP1Q9UPW5 1226 aa22.38■■□□□ 1.17
LMNB1-204ENST00000463908 LAMA4Q16363 1823 aa22.38■■□□□ 1.17
LMNB1-204ENST00000463908 USP14P54578 494 aa22.37■■□□□ 1.17
LMNB1-204ENST00000463908 RASEFQ8IZ41 740 aa22.37■■□□□ 1.17
LMNB1-204ENST00000463908 ABHD8Q96I13 439 aa22.37■■□□□ 1.17
LMNB1-204ENST00000463908 CFHR5Q9BXR6 569 aa22.37■■□□□ 1.17
LMNB1-204ENST00000463908 USP26Q9BXU7 913 aa22.37■■□□□ 1.17
LMNB1-204ENST00000463908 KRT23Q9C075 422 aa22.37■■□□□ 1.17
LMNB1-204ENST00000463908 ZCCHC17Q9NP64 241 aaKnown RBP22.37■■□□□ 1.17
LMNB1-204ENST00000463908 PTPRFP10586 1907 aa22.37■■□□□ 1.17
LMNB1-204ENST00000463908 CA12O43570 354 aa22.36■■□□□ 1.17
LMNB1-204ENST00000463908 REC8O95072 547 aa22.36■■□□□ 1.17
LMNB1-204ENST00000463908 TTLL1O95922 423 aa22.36■■□□□ 1.17
LMNB1-204ENST00000463908 COL9A3Q14050 684 aaPredicted RBP22.36■■□□□ 1.17
LMNB1-204ENST00000463908 RCSD1Q6JBY9 416 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms