RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 TNS2Q63HR2 1409 aa22.28■■□□□ 1.16
CNEP1R1-203ENST00000458059 WWC2Q6AWC2 1192 aa22.27■■□□□ 1.16
CNEP1R1-203ENST00000458059 CDC5LQ99459 802 aaKnown RBP22.27■■□□□ 1.16
CNEP1R1-203ENST00000458059 STK36Q9NRP7 1315 aa22.27■■□□□ 1.16
CNEP1R1-203ENST00000458059 CCDC175P0C221 793 aa22.27■■□□□ 1.16
CNEP1R1-203ENST00000458059 SUGCTQ9HAC7 445 aa22.27■■□□□ 1.16
CNEP1R1-203ENST00000458059 ADAMTS3O15072 1205 aa22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 VEGFAP15692 232 aaPredicted RBP22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 MCM6Q14566 821 aa22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 PAGE5Q96GU1 130 aa22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 SRRTQ9BXP5 876 aaKnown RBP22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 UBR2Q8IWV8 1755 aa22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 STAG1Q8WVM7 1258 aa22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 ZNF512BQ96KM6 892 aaPredicted RBP22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 ATRNO75882 1429 aa22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 RHOXF2BP0C7M4 288 aa22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 FXR1P51114 621 aaKnown RBP eCLIP22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 ALX1Q15699 326 aa22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 ACSBG1Q96GR2 724 aa22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 RHOXF2Q9BQY4 288 aa22.26■■□□□ 1.15
CNEP1R1-203ENST00000458059 SOS2Q07890 1332 aaPredicted RBP22.25■■□□□ 1.15
CNEP1R1-203ENST00000458059 KIF4BQ2VIQ3 1234 aa22.25■■□□□ 1.15
CNEP1R1-203ENST00000458059 MROH5Q6ZUA9 1318 aa22.25■■□□□ 1.15
CNEP1R1-203ENST00000458059 SMC1AQ14683 1233 aaKnown RBP22.25■■□□□ 1.15
CNEP1R1-203ENST00000458059 ENAHQ8N8S7 591 aaPredicted RBP22.25■■□□□ 1.15
CNEP1R1-203ENST00000458059 PLIN2Q99541 437 aa22.25■■□□□ 1.15
CNEP1R1-203ENST00000458059 ARFGAP3Q9NP61 516 aa22.25■■□□□ 1.15
CNEP1R1-203ENST00000458059 CCDC196A0A1B0GTZ2 297 aa22.24■■□□□ 1.15
CNEP1R1-203ENST00000458059 MCM7P33993 719 aa22.24■■□□□ 1.15
CNEP1R1-203ENST00000458059 TAB2Q9NYJ8 693 aa22.24■■□□□ 1.15
CNEP1R1-203ENST00000458059 RNF225M0QZC1 329 aaPredicted RBP22.24■■□□□ 1.15
CNEP1R1-203ENST00000458059 TUBB4AP04350 444 aa22.24■■□□□ 1.15
CNEP1R1-203ENST00000458059 FAM47AQ5JRC9 791 aa22.24■■□□□ 1.15
CNEP1R1-203ENST00000458059 SMIM5Q71RC9 77 aa22.24■■□□□ 1.15
CNEP1R1-203ENST00000458059 FCHSD1Q86WN1 690 aa22.24■■□□□ 1.15
CNEP1R1-203ENST00000458059 TFR2Q9UP52 801 aa22.24■■□□□ 1.15
CNEP1R1-203ENST00000458059 CEP131Q9UPN4 1083 aa22.24■■□□□ 1.15
CNEP1R1-203ENST00000458059 A0A1B0GTH6 734 aa22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 KRT2P35908 639 aa22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 HNRNPH2P55795 449 aaKnown RBP22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 PKN1Q16512 942 aa22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 IFIT1BQ5T764 474 aaKnown RBP22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 ADGRG1Q9Y653 693 aa22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 DDX60Q8IY21 1712 aaKnown RBP22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 CCDC66A2RUB6 948 aa22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 PTGDRQ13258 359 aa22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 RRAGBQ5VZM2 374 aa22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 PIK3AP1Q6ZUJ8 805 aa22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 GOLGA1Q92805 767 aa22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 CHRNDQ07001 517 aa22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 NT5DC1Q5TFE4 455 aa22.23■■□□□ 1.15
CNEP1R1-203ENST00000458059 N4BP3O15049 544 aa22.22■■□□□ 1.15
CNEP1R1-203ENST00000458059 CHMP4BP1P59074 171 aa22.22■■□□□ 1.15
CNEP1R1-203ENST00000458059 APTXQ7Z2E3 356 aaKnown RBP22.22■■□□□ 1.15
CNEP1R1-203ENST00000458059 ESR2Q92731 530 aa22.22■■□□□ 1.15
CNEP1R1-203ENST00000458059 MAGEB6P1A0A0J9YX57 407 aa22.22■■□□□ 1.15
CNEP1R1-203ENST00000458059 IGHMBP2P38935 993 aaKnown RBP22.22■■□□□ 1.15
CNEP1R1-203ENST00000458059 SPATA1Q5VX52 437 aa22.22■■□□□ 1.15
CNEP1R1-203ENST00000458059 SLC35F6Q8N357 371 aa22.22■■□□□ 1.15
CNEP1R1-203ENST00000458059 GPR161Q8N6U8 529 aaKnown RBP22.22■■□□□ 1.15
CNEP1R1-203ENST00000458059 KIF5CO60282 957 aa22.21■■□□□ 1.15
CNEP1R1-203ENST00000458059 CYP2C19P33261 490 aa22.21■■□□□ 1.15
CNEP1R1-203ENST00000458059 GPIHBP1Q8IV16 184 aa22.21■■□□□ 1.15
CNEP1R1-203ENST00000458059 NUP88Q99567 741 aaPredicted RBP22.21■■□□□ 1.15
CNEP1R1-203ENST00000458059 PARP4Q9UKK3 1724 aaKnown RBP22.21■■□□□ 1.15
CNEP1R1-203ENST00000458059 SLF1Q9BQI6 1058 aa22.21■■□□□ 1.15
CNEP1R1-203ENST00000458059 TRIM10Q9UDY6 481 aa22.21■■□□□ 1.15
CNEP1R1-203ENST00000458059 STRCP1A6NGW2 1772 aa22.21■■□□□ 1.15
CNEP1R1-203ENST00000458059 GOLGA6L9A6NEM1 432 aa22.2■■□□□ 1.15
CNEP1R1-203ENST00000458059 GYPCP04921 128 aa22.2■■□□□ 1.15
CNEP1R1-203ENST00000458059 CUL4BQ13620 913 aa22.2■■□□□ 1.15
CNEP1R1-203ENST00000458059 LONRF2Q1L5Z9 754 aa22.2■■□□□ 1.15
CNEP1R1-203ENST00000458059 BICDL1Q6ZP65 573 aa22.2■■□□□ 1.15
CNEP1R1-203ENST00000458059 RSRC2Q7L4I2 434 aaKnown RBP22.2■■□□□ 1.15
CNEP1R1-203ENST00000458059 RASGRP4Q8TDF6 673 aa22.2■■□□□ 1.15
CNEP1R1-203ENST00000458059 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.2■■□□□ 1.15
CNEP1R1-203ENST00000458059 SLAIN2Q9P270 581 aa22.2■■□□□ 1.15
CNEP1R1-203ENST00000458059 ADD3Q9UEY8 706 aaKnown RBP22.2■■□□□ 1.15
CNEP1R1-203ENST00000458059 NIP7Q9Y221 180 aaKnown RBP eCLIP22.2■■□□□ 1.15
CNEP1R1-203ENST00000458059 MYH2Q9UKX2 1941 aa22.2■■□□□ 1.14
CNEP1R1-203ENST00000458059 ZSCAN10Q96SZ4 725 aaPredicted RBP22.2■■□□□ 1.14
CNEP1R1-203ENST00000458059 RNF41Q9H4P4 317 aaPredicted RBP22.2■■□□□ 1.14
CNEP1R1-203ENST00000458059 TOGARAM1Q9Y4F4 1720 aa22.2■■□□□ 1.14
CNEP1R1-203ENST00000458059 XBP1P17861 261 aa22.2■■□□□ 1.14
CNEP1R1-203ENST00000458059 TTC38Q5R3I4 469 aa22.2■■□□□ 1.14
CNEP1R1-203ENST00000458059 KANK3Q6NY19 840 aa22.2■■□□□ 1.14
CNEP1R1-203ENST00000458059 CATIPQ7Z7H3 387 aa22.2■■□□□ 1.14
CNEP1R1-203ENST00000458059 CCDC24Q8N4L8 307 aa22.2■■□□□ 1.14
CNEP1R1-203ENST00000458059 PNKPQ96T60 521 aa22.2■■□□□ 1.14
CNEP1R1-203ENST00000458059 GDAQ9Y2T3 454 aa22.2■■□□□ 1.14
CNEP1R1-203ENST00000458059 PPP1R3GB7ZBB8 358 aa22.19■■□□□ 1.14
CNEP1R1-203ENST00000458059 H3BQF6 201 aa22.19■■□□□ 1.14
CNEP1R1-203ENST00000458059 PHACTR2O75167 634 aa22.19■■□□□ 1.14
CNEP1R1-203ENST00000458059 KCNQ4P56696 695 aa22.19■■□□□ 1.14
CNEP1R1-203ENST00000458059 SEC23AQ15436 765 aa22.19■■□□□ 1.14
CNEP1R1-203ENST00000458059 RASSF8Q8NHQ8 419 aa22.19■■□□□ 1.14
CNEP1R1-203ENST00000458059 ERCC5P28715 1186 aaPredicted RBP22.19■■□□□ 1.14
CNEP1R1-203ENST00000458059 FILIP1LQ4L180 1135 aa22.19■■□□□ 1.14
CNEP1R1-203ENST00000458059 ZNF34Q8IZ26 560 aa22.19■■□□□ 1.14
CNEP1R1-203ENST00000458059 HINFPQ9BQA5 517 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms