RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 MORC1Q86VD1 984 aa9.49□□□□□ -0.89
SSXP3-201ENST00000442971 RTF1Q92541 710 aaKnown RBP9.49□□□□□ -0.89
SSXP3-201ENST00000442971 TTF2Q9UNY4 1162 aaKnown RBP9.49□□□□□ -0.89
SSXP3-201ENST00000442971 ANXA1P04083 346 aa9.48□□□□□ -0.89
SSXP3-201ENST00000442971 CYP2C19P33261 490 aa9.48□□□□□ -0.89
SSXP3-201ENST00000442971 SIGLEC14Q08ET2 396 aa9.48□□□□□ -0.89
SSXP3-201ENST00000442971 FAM212AQ96EL1 285 aa9.48□□□□□ -0.89
SSXP3-201ENST00000442971 EDC3Q96F86 508 aaKnown RBP9.48□□□□□ -0.89
SSXP3-201ENST00000442971 SIN3AQ96ST3 1273 aa9.48□□□□□ -0.89
SSXP3-201ENST00000442971 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.48□□□□□ -0.89
SSXP3-201ENST00000442971 PICK1Q9NRD5 415 aa9.48□□□□□ -0.89
SSXP3-201ENST00000442971 PHIPQ8WWQ0 1821 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 TRIM75PA6NK02 468 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 ARHGEF15O94989 841 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 CYBAP13498 195 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 CRKP46108 304 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 ATP2B2Q01814 1243 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 GPR142Q7Z601 462 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 KCNG4Q8TDN1 519 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 XAGE3Q8WTP9 111 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 KIF12Q96FN5 646 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 ASIC4Q96FT7 647 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 ISCA1Q9BUE6 129 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 PPP1R12CQ9BZL4 782 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 ASCC2Q9H1I8 757 aaPredicted RBP9.47□□□□□ -0.89
SSXP3-201ENST00000442971 FRYQ5TBA9 3013 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 SPEF2Q9C093 1822 aa9.47□□□□□ -0.89
SSXP3-201ENST00000442971 A0A1W2PQ45 241 aaPredicted RBP9.46□□□□□ -0.9
SSXP3-201ENST00000442971 A0A1W2PQY0 241 aa9.46□□□□□ -0.9
SSXP3-201ENST00000442971 ATP5J2-PTCD1G3V325 749 aa9.46□□□□□ -0.9
SSXP3-201ENST00000442971 PEX10O60683 326 aa9.46□□□□□ -0.9
SSXP3-201ENST00000442971 HSP90B1P14625 803 aaKnown RBP9.46□□□□□ -0.9
SSXP3-201ENST00000442971 ATXN1P54253 815 aaKnown RBP9.46□□□□□ -0.9
SSXP3-201ENST00000442971 EIF4A1P60842 406 aaKnown RBP9.46□□□□□ -0.9
SSXP3-201ENST00000442971 PABPC4Q13310 644 aaKnown RBP eCLIP9.46□□□□□ -0.9
SSXP3-201ENST00000442971 NEUROD1Q13562 356 aa9.46□□□□□ -0.9
SSXP3-201ENST00000442971 FKBP1CQ5VVH2 108 aa9.46□□□□□ -0.9
SSXP3-201ENST00000442971 PLEKHH3Q7Z736 793 aa9.46□□□□□ -0.9
SSXP3-201ENST00000442971 CCAR1Q8IX12 1150 aaKnown RBP9.46□□□□□ -0.9
SSXP3-201ENST00000442971 SCYL3Q8IZE3 742 aa9.46□□□□□ -0.9
SSXP3-201ENST00000442971 GPRC5AQ8NFJ5 357 aa9.46□□□□□ -0.9
SSXP3-201ENST00000442971 GDPD5Q8WTR4 605 aa9.46□□□□□ -0.9
SSXP3-201ENST00000442971 CDC5LQ99459 802 aaKnown RBP9.46□□□□□ -0.9
SSXP3-201ENST00000442971 TMOD2Q9NZR1 351 aa9.46□□□□□ -0.9
SSXP3-201ENST00000442971 ZBBXA8MT70 800 aa9.45□□□□□ -0.9
SSXP3-201ENST00000442971 SEPT4O43236 478 aa9.45□□□□□ -0.9
SSXP3-201ENST00000442971 DIAPH1O60610 1272 aaKnown RBP9.45□□□□□ -0.9
SSXP3-201ENST00000442971 LMNAP02545 664 aaKnown RBP9.45□□□□□ -0.9
SSXP3-201ENST00000442971 IL1R1P14778 569 aa9.45□□□□□ -0.9
SSXP3-201ENST00000442971 SDHBP21912 280 aa9.45□□□□□ -0.9
SSXP3-201ENST00000442971 DCTN1Q14203 1278 aa9.45□□□□□ -0.9
SSXP3-201ENST00000442971 LRSAM1Q6UWE0 723 aa9.45□□□□□ -0.9
SSXP3-201ENST00000442971 PROCA1Q8NCQ7 364 aaPredicted RBP9.45□□□□□ -0.9
SSXP3-201ENST00000442971 MS4A3Q96HJ5 214 aa9.45□□□□□ -0.9
SSXP3-201ENST00000442971 PHACTR3Q96KR7 559 aa9.45□□□□□ -0.9
SSXP3-201ENST00000442971 FAM47AQ5JRC9 791 aa9.44□□□□□ -0.9
SSXP3-201ENST00000442971 SPRED2Q7Z698 418 aa9.44□□□□□ -0.9
SSXP3-201ENST00000442971 PORCNQ9H237 461 aa9.44□□□□□ -0.9
SSXP3-201ENST00000442971 TXNRD2Q9NNW7 524 aa9.44□□□□□ -0.9
SSXP3-201ENST00000442971 OTOGLQ3ZCN5 2332 aa9.44□□□□□ -0.9
SSXP3-201ENST00000442971 PDE8AO60658 829 aa9.43□□□□□ -0.9
SSXP3-201ENST00000442971 CYP2C18P33260 490 aa9.43□□□□□ -0.9
SSXP3-201ENST00000442971 KCNJ4P48050 445 aa9.43□□□□□ -0.9
SSXP3-201ENST00000442971 EIF4G2P78344 907 aaKnown RBP eCLIP9.43□□□□□ -0.9
SSXP3-201ENST00000442971 SMAD2Q15796 467 aaKnown RBP9.43□□□□□ -0.9
SSXP3-201ENST00000442971 MFSD14BQ5SR56 506 aa9.43□□□□□ -0.9
SSXP3-201ENST00000442971 HINFPQ9BQA5 517 aa9.43□□□□□ -0.9
SSXP3-201ENST00000442971 DBF4Q9UBU7 674 aaPredicted RBP9.43□□□□□ -0.9
SSXP3-201ENST00000442971 LOC285556D6RIA3 1793 aa9.42□□□□□ -0.9
SSXP3-201ENST00000442971 PHF20L1A8MW92 1017 aa9.42□□□□□ -0.9
SSXP3-201ENST00000442971 PDGFBP01127 241 aaPredicted RBP9.42□□□□□ -0.9
SSXP3-201ENST00000442971 EIF2S2P20042 333 aaKnown RBP9.42□□□□□ -0.9
SSXP3-201ENST00000442971 Q3C1V9 767 aa9.42□□□□□ -0.9
SSXP3-201ENST00000442971 ASTLQ6HA08 431 aaPredicted RBP9.42□□□□□ -0.9
SSXP3-201ENST00000442971 PRR23BQ6ZRT6 265 aa9.42□□□□□ -0.9
SSXP3-201ENST00000442971 EP400NLQ6ZTU2 488 aa9.42□□□□□ -0.9
SSXP3-201ENST00000442971 HNRNPABQ99729 332 aaKnown RBP9.42□□□□□ -0.9
SSXP3-201ENST00000442971 ANKRD2Q9GZV1 360 aa9.42□□□□□ -0.9
SSXP3-201ENST00000442971 CWC22Q9HCG8 908 aaKnown RBP9.42□□□□□ -0.9
SSXP3-201ENST00000442971 STARD7Q9NQZ5 370 aa9.42□□□□□ -0.9
SSXP3-201ENST00000442971 MROH7Q68CQ1 1323 aa9.42□□□□□ -0.9
SSXP3-201ENST00000442971 DCDC2BA2VCK2 349 aa9.41□□□□□ -0.9
SSXP3-201ENST00000442971 STXBP3O00186 592 aa9.41□□□□□ -0.9
SSXP3-201ENST00000442971 IGHA2P01877 340 aa9.41□□□□□ -0.9
SSXP3-201ENST00000442971 HOXC6P09630 235 aa9.41□□□□□ -0.9
SSXP3-201ENST00000442971 ZNF804AQ7Z570 1209 aa9.41□□□□□ -0.9
SSXP3-201ENST00000442971 RNF180Q86T96 592 aa9.41□□□□□ -0.9
SSXP3-201ENST00000442971 CRACR2BQ8N4Y2 399 aaPredicted RBP9.41□□□□□ -0.9
SSXP3-201ENST00000442971 TMEM105Q8N8V8 129 aa9.41□□□□□ -0.9
SSXP3-201ENST00000442971 NPLOC4Q8TAT6 608 aa9.41□□□□□ -0.9
SSXP3-201ENST00000442971 PNISRQ8TF01 805 aaKnown RBP9.41□□□□□ -0.9
SSXP3-201ENST00000442971 FAM151AQ8WW52 585 aa9.41□□□□□ -0.9
SSXP3-201ENST00000442971 SEMA4AQ9H3S1 761 aa9.41□□□□□ -0.9
SSXP3-201ENST00000442971 NBEAQ8NFP9 2946 aa9.41□□□□□ -0.9
SSXP3-201ENST00000442971 GLRX3O76003 335 aaKnown RBP9.4□□□□□ -0.9
SSXP3-201ENST00000442971 ERVK-9P63128 1117 aa9.4□□□□□ -0.9
SSXP3-201ENST00000442971 ERVK-24P63145 666 aa9.4□□□□□ -0.9
SSXP3-201ENST00000442971 TRIM28Q13263 835 aaKnown RBP9.4□□□□□ -0.9
SSXP3-201ENST00000442971 NUP133Q8WUM0 1156 aa9.4□□□□□ -0.9
SSXP3-201ENST00000442971 PABPC5Q96DU9 382 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms