RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 ZNF804AQ7Z570 1209 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 NPAS3Q8IXF0 933 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 ANKRD13AQ8IZ07 590 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 TMTC2Q8N394 836 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 CCDC82Q8N4S0 544 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 RHPN1Q8TCX5 695 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 LPIN2Q92539 896 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 RTFDC1Q9BY42 306 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 LRRCC1Q9C099 1032 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 ZNF277Q9NRM2 450 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 RNF181Q9P0P0 153 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 POLLQ9UGP5 575 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 SPEF2Q9C093 1822 aa7.5□□□□□ -1.21
ECHDC1-208ENST00000436638 BRCA1P38398 1863 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 A0A1B0GUL7 405 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 PATL2C9JE40 543 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 H3BM21 787 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 NFKBIEO00221 500 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 PPFIA3O75145 1194 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 SASH1O94885 1247 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 IFIT2P09913 472 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 RHOQP17081 205 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 EIF6P56537 245 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 EML3Q32P44 896 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 TNNI3KQ59H18 835 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 ANKRD45Q5TZF3 282 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 DEPDC4Q8N2C3 294 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 GLMNQ92990 594 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 IL1RAPL2Q9NP60 686 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 GPR108Q9NPR9 543 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 GNL3LQ9NVN8 582 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 PPP4R2Q9NY27 417 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 FPGT-TNNI3KV9GXZ4 949 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 ARFGEF1Q9Y6D6 1849 aa7.49□□□□□ -1.21
ECHDC1-208ENST00000436638 MED23Q9ULK4 1368 aa7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 COL4A1P02462 1669 aa7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 STAU1O95793 577 aaKnown RBP7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 HIBADHP31937 336 aaKnown RBP7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 GPC1P35052 558 aa7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 TIMM10P62072 90 aa7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 KIAA2012Q0VF49 1180 aa7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 CCDC158Q5M9N0 1113 aa7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 C9orf131Q5VYM1 1079 aa7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 SPTY2D1Q68D10 685 aaPredicted RBP7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 SLC51AQ86UW1 340 aa7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 AACSQ86V21 672 aa7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 GPATCH3Q96I76 525 aa7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 GPR101Q96P66 508 aaPredicted RBP7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 ESYT1Q9BSJ8 1104 aa7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 COA1Q9GZY4 146 aa7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 CCDC8Q9H0W5 538 aaPredicted RBP7.48□□□□□ -1.21
ECHDC1-208ENST00000436638 LRRC37AA6NMS7 1700 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 SNAP23O00161 211 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 ECE2O60344 883 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 IL2RAP01589 272 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 IGHDP01880 384 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 UQCRFS1P1P0C7P4 283 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 FGFR2P21802 821 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 GYG1P46976 350 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 CENPCQ03188 943 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 POU4F2Q12837 409 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 NCOA4Q13772 614 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 TTC39AQ5SRH9 613 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 AXDND1Q5T1B0 1012 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 B4GALNT3Q6L9W6 998 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 C15orf52Q6ZUT6 534 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 CENPQQ7L2Z9 268 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 PODNQ7Z5L7 613 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 CCDC155Q8N6L0 562 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 VGLL2Q8N8G2 317 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 IRF7Q92985 503 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 XAGE2Q96GT9 111 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 CALR3Q96L12 384 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 DBNDD1Q9H9R9 158 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 CD209Q9NNX6 404 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 ZNRF3Q9ULT6 936 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 NOD1Q9Y239 953 aa7.47□□□□□ -1.21
ECHDC1-208ENST00000436638 ZNF609O15014 1411 aa7.46□□□□□ -1.21
ECHDC1-208ENST00000436638 SLC35F4A4IF30 521 aa7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 USP17L5A8MUK1 530 aa7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 SMARCA5O60264 1052 aaPredicted RBP7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 LZTS3O60299 673 aaPredicted RBP7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 KLRK1P26718 216 aa7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 TNIP1Q15025 636 aa7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 LCE2AQ5TA79 106 aaPredicted RBP7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 CIAPIN1Q6FI81 312 aa7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 TBC1D9Q6ZT07 1266 aa7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 SMC5Q8IY18 1101 aa7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 EAF2Q96CJ1 260 aaPredicted RBP7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 FAM84BQ96KN1 310 aaPredicted RBP7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 DBNDD2Q9BQY9 259 aa7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 GRIP2Q9C0E4 1043 aa7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 ETNK1Q9HBU6 452 aa7.46□□□□□ -1.22
ECHDC1-208ENST00000436638 SNED1Q8TER0 1413 aa7.45□□□□□ -1.22
ECHDC1-208ENST00000436638 FER1L6Q2WGJ9 1857 aa7.45□□□□□ -1.22
ECHDC1-208ENST00000436638 USP17L3A6NCW0 530 aa7.45□□□□□ -1.22
ECHDC1-208ENST00000436638 USP17L4A6NCW7 530 aa7.45□□□□□ -1.22
ECHDC1-208ENST00000436638 WTIPA6NIX2 430 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-208ENST00000436638 ADORA1P30542 326 aa7.45□□□□□ -1.22
ECHDC1-208ENST00000436638 GTF2IP78347 998 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms