RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 PICK1Q9NRD5 415 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 STAP2Q9UGK3 403 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 LHX6Q9UPM6 363 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 SALL3Q9BXA9 1300 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 ATAD5Q96QE3 1844 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 RFX7Q2KHR2 1363 aa6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 RPAP1Q9BWH6 1393 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P24-201ENST00000433260 SIPA1L1O43166 1804 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 MINDY4BA8MYZ0 360 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 USP17L12C9JPN9 530 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 USP17L21D6R901 530 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 SMIM22K7EJ46 135 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 IGF2BP3O00425 579 aaKnown RBP eCLIP6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 CAP2P40123 477 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 GTF2A2P52657 109 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 SHROOM1Q2M3G4 852 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 OTUD7BQ6GQQ9 843 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 CCDC129Q6ZRS4 1044 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 CERS3Q8IU89 383 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 FAM43AQ8N2R8 423 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 BRI3BPQ8WY22 251 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 APPBP2Q92624 585 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 OSBP2Q969R2 916 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 EVI5LQ96CN4 794 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 DYNLL2Q96FJ2 89 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 STRBPQ96SI9 672 aaKnown RBP6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 DCP1AQ9NPI6 582 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 HERC5Q9UII4 1024 aaKnown RBP6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 THSD7BQ9C0I4 1608 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 ATRNL1Q5VV63 1379 aa6.93□□□□□ -1.3
HMGB3P24-201ENST00000433260 DOCK1Q14185 1865 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 NAV1Q8NEY1 1877 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 TRIM75PA6NK02 468 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 MPHOSPH10O00566 681 aaKnown RBP6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 CA12O43570 354 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 ZFYP08048 801 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 CETPP11597 493 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 SPP2Q13103 211 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 PPIL2Q13356 520 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 SNAPC2Q13487 334 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 DGKZQ13574 1117 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 RAB3GAP1Q15042 981 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 LRRFIP1Q32MZ4 808 aaKnown RBP6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 CERKLQ49MI3 558 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 NOL9Q5SY16 702 aaKnown RBP6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 CTR9Q6PD62 1173 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 TMED8Q6PL24 325 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 GADL1Q6ZQY3 521 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 SKAP1Q86WV1 359 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 DDRGK1Q96HY6 314 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 DNAJC18Q9H819 358 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 SERPINB13Q9UIV8 391 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 AFG3L2Q9Y4W6 797 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 PHIPQ8WWQ0 1821 aa6.92□□□□□ -1.3
HMGB3P24-201ENST00000433260 USP17L5A8MUK1 530 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 GSG1L2A8MUP6 293 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 PATL2C9JE40 543 aaKnown RBP6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 BTBD19C9JJ37 291 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 GPR25O00155 361 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 GPAA1O43292 621 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 ALDH1A1P00352 501 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 GH2P01242 217 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 NEFLP07196 543 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 CENPBP07199 599 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 SDSP20132 328 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 NMIQ13287 307 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 CRHR2Q13324 411 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 TAF1CQ15572 869 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 ZYXQ15942 572 aaKnown RBP6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 ABCB5Q2M3G0 1257 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 ZMYM1Q5SVZ6 1142 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 C6orf132Q5T0Z8 1188 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 C12orf60Q5U649 245 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 TATDN1Q6P1N9 297 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 AMOTL1Q8IY63 956 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 IFNL3Q8IZI9 196 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 TNS4Q8IZW8 715 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 SLC44A5Q8NCS7 719 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 ZNF296Q8WUU4 475 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 FAM227BQ96M60 508 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 AS3MTQ9HBK9 375 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 SLC24A3Q9HC58 644 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 CABP5Q9NP86 173 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 PRDM10Q9NQV6 1147 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 ATP8A2Q9NTI2 1148 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 SAGE1Q9NXZ1 904 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 MYH8P13535 1937 aa6.91□□□□□ -1.3
HMGB3P24-201ENST00000433260 PDHXO00330 501 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 CXCL11O14625 94 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 CYP2C8P10632 490 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 SHMT1P34896 483 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 TDO2P48775 406 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 CDK8P49336 464 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 HMGCS2P54868 508 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 PTGDRQ13258 359 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 SEPT2Q15019 361 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 MCMDC2Q4G0Z9 681 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 CWC27Q6UX04 472 aaKnown RBP6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 METTL16Q86W50 562 aaKnown RBP6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 ZNF280CQ8ND82 737 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms