RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 MTA3Q9BTC8 594 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 DNAJC18Q9H819 358 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 TMOD4Q9NZQ9 345 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 STX8Q9UNK0 236 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 FZD1Q9UP38 647 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 SPDYE5A6NIY4 337 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 C19orf81C9J6K1 198 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 CXCL11O14625 94 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 IFIT3O14879 490 aaKnown RBP11.73□□□□□ -0.53
HDLBP-209ENST00000422933 TTLL1O95922 423 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 AKR1B1P15121 316 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 PTPRAP18433 802 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 CTCFP49711 727 aaPredicted RBP11.73□□□□□ -0.53
HDLBP-209ENST00000422933 INHBEP58166 350 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 GRM1Q13255 1194 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 PPIL2Q13356 520 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 SNAPC2Q13487 334 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 SEPT2Q15019 361 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 SYNE3Q6ZMZ3 975 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 REM2Q8IYK8 340 aaPredicted RBP11.73□□□□□ -0.53
HDLBP-209ENST00000422933 ZNF280CQ8ND82 737 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 OPTNQ96CV9 577 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 OTUD5Q96G74 571 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 TMEM87BQ96K49 555 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 JAKMIP1Q96N16 626 aaKnown RBP11.73□□□□□ -0.53
HDLBP-209ENST00000422933 GOPCQ9HD26 462 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 TCP11L1Q9NUJ3 509 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 SNX14Q9Y5W7 946 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 CYP46A1Q9Y6A2 500 aa11.73□□□□□ -0.53
HDLBP-209ENST00000422933 NEDD4P46934 1319 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 USP17L10C9JJH3 530 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 RAD21O60216 631 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 SEC24BO95487 1268 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 CASTP20810 708 aaKnown RBP11.72□□□□□ -0.53
HDLBP-209ENST00000422933 GTF2A2P52657 109 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 EVX2Q03828 476 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 SREBF2Q12772 1141 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 NOGQ13253 232 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 PABPC4Q13310 644 aaKnown RBP eCLIP11.72□□□□□ -0.53
HDLBP-209ENST00000422933 IFIT1BQ5T764 474 aaKnown RBP11.72□□□□□ -0.53
HDLBP-209ENST00000422933 OTUD7BQ6GQQ9 843 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 NFXL1Q6ZNB6 911 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 DHX32Q7L7V1 743 aaKnown RBP11.72□□□□□ -0.53
HDLBP-209ENST00000422933 FASTKD5Q7L8L6 764 aaKnown RBP11.72□□□□□ -0.53
HDLBP-209ENST00000422933 DGKHQ86XP1 1220 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 KCNB2Q92953 911 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 CLMNQ96JQ2 1002 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 ZSCAN10Q96SZ4 725 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-209ENST00000422933 WDR18Q9BV38 432 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 TM6SF1Q9BZW5 370 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 KAT14Q9H8E8 782 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 ZSWIM5Q9P217 1185 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 NYAP2Q9P242 653 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 PCDH10Q9P2E7 1040 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 CLIP2Q9UDT6 1046 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 SYNPO2Q9UMS6 1093 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 SNCAIPQ9Y6H5 919 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 OTOFQ9HC10 1997 aa11.72□□□□□ -0.53
HDLBP-209ENST00000422933 PLIN4Q96Q06 1357 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 WDR19Q8NEZ3 1342 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 WDR33Q9C0J8 1336 aaKnown RBP11.71□□□□□ -0.53
HDLBP-209ENST00000422933 MYH4Q9Y623 1939 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 MANSC4A6NHS7 340 aaPredicted RBP11.71□□□□□ -0.53
HDLBP-209ENST00000422933 CCDC69A6NI79 296 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 TRIM75PA6NK02 468 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 PRC1O43663 620 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 TOP1P11387 765 aaKnown RBP11.71□□□□□ -0.53
HDLBP-209ENST00000422933 CETPP11597 493 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 SPP2Q13103 211 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 WTAPQ15007 396 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 TMEM67Q5HYA8 995 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 SPRYD7Q5W111 196 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 USP17L2Q6R6M4 530 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 CEP95Q96GE4 821 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 ABHD8Q96I13 439 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 WNK4Q96J92 1243 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 NBPF3Q9H094 633 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 INCENPQ9NQS7 918 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 MTMR4Q9NYA4 1195 aa11.71□□□□□ -0.53
HDLBP-209ENST00000422933 ISY1Q9ULR0 285 aaKnown RBP11.71□□□□□ -0.53
HDLBP-209ENST00000422933 SMIM22K7EJ46 135 aa11.7□□□□□ -0.54
HDLBP-209ENST00000422933 SLC10A3P09131 477 aa11.7□□□□□ -0.54
HDLBP-209ENST00000422933 SLURP2P0DP57 97 aa11.7□□□□□ -0.54
HDLBP-209ENST00000422933 EEF2P13639 858 aaKnown RBP11.7□□□□□ -0.54
HDLBP-209ENST00000422933 BACE1P56817 501 aa11.7□□□□□ -0.54
HDLBP-209ENST00000422933 ANKRD1Q15327 319 aa11.7□□□□□ -0.54
HDLBP-209ENST00000422933 RUFY3Q7L099 469 aa11.7□□□□□ -0.54
HDLBP-209ENST00000422933 CATIPQ7Z7H3 387 aa11.7□□□□□ -0.54
HDLBP-209ENST00000422933 RASEFQ8IZ41 740 aa11.7□□□□□ -0.54
HDLBP-209ENST00000422933 ZKSCAN3Q9BRR0 538 aa11.7□□□□□ -0.54
HDLBP-209ENST00000422933 AFG3L2Q9Y4W6 797 aa11.7□□□□□ -0.54
HDLBP-209ENST00000422933 TNKSO95271 1327 aa11.69□□□□□ -0.54
HDLBP-209ENST00000422933 IRF6O14896 467 aa11.69□□□□□ -0.54
HDLBP-209ENST00000422933 RPS6KB1P23443 525 aa11.69□□□□□ -0.54
HDLBP-209ENST00000422933 RBM25P49756 843 aaKnown RBP11.69□□□□□ -0.54
HDLBP-209ENST00000422933 RRP1BQ14684 758 aaKnown RBP11.69□□□□□ -0.54
HDLBP-209ENST00000422933 GADL1Q6ZQY3 521 aa11.69□□□□□ -0.54
HDLBP-209ENST00000422933 STOX1Q6ZVD7 989 aa11.69□□□□□ -0.54
HDLBP-209ENST00000422933 RASAL3Q86YV0 1011 aa11.69□□□□□ -0.54
HDLBP-209ENST00000422933 MB21D2Q8IYB1 491 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms