RNA–Protein interactions for RNA: ENST00000418988.2

PSMA1-202, Transcript of proteasome subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PSMA1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-202ENST00000418988 SGPL1O95470 568 aa16.78■□□□□ 0.28
PSMA1-202ENST00000418988 POLR3DP05423 398 aaPredicted RBP16.78■□□□□ 0.28
PSMA1-202ENST00000418988 FLT3LGP49771 235 aa16.78■□□□□ 0.28
PSMA1-202ENST00000418988 RRP1BQ14684 758 aaKnown RBP16.78■□□□□ 0.28
PSMA1-202ENST00000418988 SH3D19Q5HYK7 790 aa16.78■□□□□ 0.28
PSMA1-202ENST00000418988 CCDC84Q86UT8 332 aaPredicted RBP16.78■□□□□ 0.28
PSMA1-202ENST00000418988 FSD1Q9BTV5 496 aa16.78■□□□□ 0.28
PSMA1-202ENST00000418988 OSBPL3Q9H4L5 887 aa16.78■□□□□ 0.28
PSMA1-202ENST00000418988 AGTPBP1Q9UPW5 1226 aa16.78■□□□□ 0.28
PSMA1-202ENST00000418988 NR2E3Q9Y5X4 410 aa16.78■□□□□ 0.28
PSMA1-202ENST00000418988 ALPK3Q96L96 1907 aa16.77■□□□□ 0.28
PSMA1-202ENST00000418988 IGHDP01880 384 aa16.77■□□□□ 0.28
PSMA1-202ENST00000418988 TFRCP02786 760 aaKnown RBP16.77■□□□□ 0.28
PSMA1-202ENST00000418988 INHAP05111 366 aa16.77■□□□□ 0.28
PSMA1-202ENST00000418988 PLCD1P51178 756 aa16.77■□□□□ 0.28
PSMA1-202ENST00000418988 EVI5LQ96CN4 794 aa16.77■□□□□ 0.28
PSMA1-202ENST00000418988 LNPKQ9C0E8 428 aa16.77■□□□□ 0.28
PSMA1-202ENST00000418988 PRO3102Q9H379 93 aa16.77■□□□□ 0.28
PSMA1-202ENST00000418988 GREB1LQ9C091 1923 aaPredicted RBP16.76■□□□□ 0.27
PSMA1-202ENST00000418988 TNPO2O14787 897 aaKnown RBP16.76■□□□□ 0.27
PSMA1-202ENST00000418988 GPAA1O43292 621 aa16.76■□□□□ 0.27
PSMA1-202ENST00000418988 CHGBP05060 677 aa16.76■□□□□ 0.27
PSMA1-202ENST00000418988 SHMT1P34896 483 aa16.76■□□□□ 0.27
PSMA1-202ENST00000418988 SLFNL1Q499Z3 407 aa16.76■□□□□ 0.27
PSMA1-202ENST00000418988 OSBP2Q969R2 916 aa16.76■□□□□ 0.27
PSMA1-202ENST00000418988 DEFB118Q96PH6 123 aa16.76■□□□□ 0.27
PSMA1-202ENST00000418988 STRBPQ96SI9 672 aaKnown RBP16.76■□□□□ 0.27
PSMA1-202ENST00000418988 PNMA3Q9UL41 463 aa16.76■□□□□ 0.27
PSMA1-202ENST00000418988 SLC4A4Q9Y6R1 1079 aa16.76■□□□□ 0.27
PSMA1-202ENST00000418988 EVI5O60447 810 aa16.75■□□□□ 0.27
PSMA1-202ENST00000418988 GDF11O95390 407 aa16.75■□□□□ 0.27
PSMA1-202ENST00000418988 BACE1P56817 501 aa16.75■□□□□ 0.27
PSMA1-202ENST00000418988 SPP2Q13103 211 aa16.75■□□□□ 0.27
PSMA1-202ENST00000418988 PABPC4Q13310 644 aaKnown RBP eCLIP16.75■□□□□ 0.272e-8■■■■■ 38.1
PSMA1-202ENST00000418988 CERKLQ49MI3 558 aaPredicted RBP16.75■□□□□ 0.27
PSMA1-202ENST00000418988 ZMYM1Q5SVZ6 1142 aa16.75■□□□□ 0.27
PSMA1-202ENST00000418988 C12orf60Q5U649 245 aa16.75■□□□□ 0.27
PSMA1-202ENST00000418988 SMCR8Q8TEV9 937 aaPredicted RBP16.75■□□□□ 0.27
PSMA1-202ENST00000418988 C19orf81C9J6K1 198 aa16.74■□□□□ 0.27
PSMA1-202ENST00000418988 SOX1O00570 391 aaPredicted RBP16.74■□□□□ 0.27
PSMA1-202ENST00000418988 PRKAB2O43741 272 aa16.74■□□□□ 0.27
PSMA1-202ENST00000418988 GH2P01242 217 aa16.74■□□□□ 0.27
PSMA1-202ENST00000418988 ABCB5Q2M3G0 1257 aa16.74■□□□□ 0.27
PSMA1-202ENST00000418988 SBK1Q52WX2 424 aa16.74■□□□□ 0.27
PSMA1-202ENST00000418988 ANKRD13CQ8N6S4 541 aa16.74■□□□□ 0.27
PSMA1-202ENST00000418988 CABP5Q9NP86 173 aa16.74■□□□□ 0.27
PSMA1-202ENST00000418988 USP17L10C9JJH3 530 aa16.73■□□□□ 0.27
PSMA1-202ENST00000418988 HMGCS2P54868 508 aa16.73■□□□□ 0.27
PSMA1-202ENST00000418988 MTMR2Q13614 643 aa16.73■□□□□ 0.27
PSMA1-202ENST00000418988 TREML2Q5T2D2 321 aa16.73■□□□□ 0.27
PSMA1-202ENST00000418988 C16orf86Q6ZW13 317 aa16.73■□□□□ 0.27
PSMA1-202ENST00000418988 SLC17A8Q8NDX2 589 aa16.73■□□□□ 0.27
PSMA1-202ENST00000418988 LRCH3Q96II8 777 aa16.73■□□□□ 0.27
PSMA1-202ENST00000418988 C12orf42Q96LP6 360 aa16.73■□□□□ 0.27
PSMA1-202ENST00000418988 GSG1L2A8MUP6 293 aa16.72■□□□□ 0.27
PSMA1-202ENST00000418988 USP17L12C9JPN9 530 aa16.72■□□□□ 0.27
PSMA1-202ENST00000418988 USP17L21D6R901 530 aa16.72■□□□□ 0.27
PSMA1-202ENST00000418988 M0R2C6 588 aa16.72■□□□□ 0.27
PSMA1-202ENST00000418988 JAG1P78504 1218 aa16.72■□□□□ 0.27
PSMA1-202ENST00000418988 B4GALNT3Q6L9W6 998 aa16.72■□□□□ 0.27
PSMA1-202ENST00000418988 CTR9Q6PD62 1173 aa16.72■□□□□ 0.27
PSMA1-202ENST00000418988 TMEM179Q6ZVK1 233 aa16.72■□□□□ 0.27
PSMA1-202ENST00000418988 PLEKHM2Q8IWE5 1019 aa16.72■□□□□ 0.27
PSMA1-202ENST00000418988 PXYLP1Q8TE99 480 aa16.72■□□□□ 0.27
PSMA1-202ENST00000418988 DIS3LQ8TF46 1054 aaKnown RBP16.72■□□□□ 0.27
PSMA1-202ENST00000418988 PAWRQ96IZ0 340 aaKnown RBP16.72■□□□□ 0.27
PSMA1-202ENST00000418988 CCDC17Q96LX7 622 aa16.72■□□□□ 0.27
PSMA1-202ENST00000418988 KIAA1683Q9H0B3 1180 aa16.72■□□□□ 0.27
PSMA1-202ENST00000418988 TMOD4Q9NZQ9 345 aa16.72■□□□□ 0.27
PSMA1-202ENST00000418988 USP14P54578 494 aa16.71■□□□□ 0.27
PSMA1-202ENST00000418988 IRF5Q13568 498 aa16.71■□□□□ 0.27
PSMA1-202ENST00000418988 COA7Q96BR5 231 aa16.71■□□□□ 0.27
PSMA1-202ENST00000418988 NACAP1Q9BZK3 213 aa16.71■□□□□ 0.27
PSMA1-202ENST00000418988 EPB41L4AQ9HCS5 686 aaPredicted RBP16.71■□□□□ 0.27
PSMA1-202ENST00000418988 ZMYM6O95789 1325 aa16.7■□□□□ 0.26
PSMA1-202ENST00000418988 A0A0G2JMZ2 1700 aa16.7■□□□□ 0.26
PSMA1-202ENST00000418988 DLL1O00548 723 aa16.7■□□□□ 0.26
PSMA1-202ENST00000418988 CYP2D6P10635 497 aa16.7■□□□□ 0.26
PSMA1-202ENST00000418988 HOXA7P31268 230 aaPredicted RBP16.7■□□□□ 0.26
PSMA1-202ENST00000418988 GCLCP48506 637 aaPredicted RBP16.7■□□□□ 0.26
PSMA1-202ENST00000418988 TDO2P48775 406 aa16.7■□□□□ 0.26
PSMA1-202ENST00000418988 FAM110CQ1W6H9 321 aa16.7■□□□□ 0.26
PSMA1-202ENST00000418988 SHROOM1Q2M3G4 852 aaPredicted RBP16.7■□□□□ 0.26
PSMA1-202ENST00000418988 FEZ1Q99689 392 aa16.7■□□□□ 0.26
PSMA1-202ENST00000418988 ZNF287Q9HBT7 754 aa16.7■□□□□ 0.26
PSMA1-202ENST00000418988 PAK6Q9NQU5 681 aaPredicted RBP16.7■□□□□ 0.26
PSMA1-202ENST00000418988 HELLSQ9NRZ9 838 aa16.7■□□□□ 0.26
PSMA1-202ENST00000418988 PLIN4Q96Q06 1357 aa16.69■□□□□ 0.26
PSMA1-202ENST00000418988 LAMA4Q16363 1823 aa16.69■□□□□ 0.26
PSMA1-202ENST00000418988 PATL2C9JE40 543 aaKnown RBP16.69■□□□□ 0.26
PSMA1-202ENST00000418988 IRX6P78412 446 aaPredicted RBP16.69■□□□□ 0.26
PSMA1-202ENST00000418988 EVX2Q03828 476 aa16.69■□□□□ 0.26
PSMA1-202ENST00000418988 RAB3GAP1Q15042 981 aa16.69■□□□□ 0.26
PSMA1-202ENST00000418988 USP17L2Q6R6M4 530 aa16.69■□□□□ 0.26
PSMA1-202ENST00000418988 C7orf61Q8IZ16 206 aa16.69■□□□□ 0.26
PSMA1-202ENST00000418988 SLC44A5Q8NCS7 719 aa16.69■□□□□ 0.26
PSMA1-202ENST00000418988 GTF3C2Q8WUA4 911 aaPredicted RBP16.69■□□□□ 0.26
PSMA1-202ENST00000418988 CRISPLD2Q9H0B8 497 aa16.69■□□□□ 0.26
PSMA1-202ENST00000418988 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.69■□□□□ 0.26
PSMA1-202ENST00000418988 SH2D4AQ9H788 454 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms