RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 UBE2OQ9C0C9 1292 aaKnown RBP18.93■□□□□ 0.62
SBDSP1-201ENST00000415772 TLR7Q9NYK1 1049 aaKnown RBP18.93■□□□□ 0.62
SBDSP1-201ENST00000415772 RABGAP1Q9Y3P9 1069 aa18.93■□□□□ 0.62
SBDSP1-201ENST00000415772 SOX1O00570 391 aaPredicted RBP18.92■□□□□ 0.62
SBDSP1-201ENST00000415772 CNGA1P29973 690 aa18.92■□□□□ 0.62
SBDSP1-201ENST00000415772 HNRNPUQ00839 825 aaKnown RBP eCLIP18.92■□□□□ 0.62
SBDSP1-201ENST00000415772 MAP2K5Q13163 448 aa18.92■□□□□ 0.62
SBDSP1-201ENST00000415772 Q3C1V9 767 aa18.92■□□□□ 0.62
SBDSP1-201ENST00000415772 MAP3K21Q5TCX8 1036 aa18.92■□□□□ 0.62
SBDSP1-201ENST00000415772 TMED8Q6PL24 325 aaPredicted RBP18.92■□□□□ 0.62
SBDSP1-201ENST00000415772 AACSQ86V21 672 aa18.92■□□□□ 0.62
SBDSP1-201ENST00000415772 EDC3Q96F86 508 aaKnown RBP18.92■□□□□ 0.62
SBDSP1-201ENST00000415772 EHD4Q9H223 541 aa18.92■□□□□ 0.62
SBDSP1-201ENST00000415772 NOP58Q9Y2X3 529 aaKnown RBP18.92■□□□□ 0.62
SBDSP1-201ENST00000415772 DOCK3Q8IZD9 2030 aa18.91■□□□□ 0.62
SBDSP1-201ENST00000415772 PLXNB2O15031 1838 aa18.91■□□□□ 0.62
SBDSP1-201ENST00000415772 MPHOSPH10O00566 681 aaKnown RBP18.91■□□□□ 0.62
SBDSP1-201ENST00000415772 CCND3P30281 292 aaPredicted RBP18.91■□□□□ 0.62
SBDSP1-201ENST00000415772 MAGEA10P43363 369 aaPredicted RBP18.91■□□□□ 0.62
SBDSP1-201ENST00000415772 ATP2B2Q01814 1243 aa18.91■□□□□ 0.62
SBDSP1-201ENST00000415772 TTF1Q15361 905 aaPredicted RBP18.91■□□□□ 0.62
SBDSP1-201ENST00000415772 CCL14Q16627 93 aa18.91■□□□□ 0.62
SBDSP1-201ENST00000415772 TATDN1Q6P1N9 297 aa18.91■□□□□ 0.62
SBDSP1-201ENST00000415772 EAF2Q96CJ1 260 aaPredicted RBP18.91■□□□□ 0.62
SBDSP1-201ENST00000415772 BCL11AQ9H165 835 aa18.91■□□□□ 0.62
SBDSP1-201ENST00000415772 NDUFB9Q9Y6M9 179 aa18.91■□□□□ 0.62
SBDSP1-201ENST00000415772 MYH1P12882 1939 aa18.9■□□□□ 0.62
SBDSP1-201ENST00000415772 HSP90AB4PQ58FF6 505 aa18.9■□□□□ 0.62
SBDSP1-201ENST00000415772 MORN1Q5T089 497 aa18.9■□□□□ 0.62
SBDSP1-201ENST00000415772 TDHQ8IZJ6 230 aa18.9■□□□□ 0.62
SBDSP1-201ENST00000415772 C12orf42Q96LP6 360 aa18.9■□□□□ 0.62
SBDSP1-201ENST00000415772 CRNKL1Q9BZJ0 848 aaKnown RBP18.9■□□□□ 0.62
SBDSP1-201ENST00000415772 KIAA1683Q9H0B3 1180 aa18.9■□□□□ 0.62
SBDSP1-201ENST00000415772 ALPK3Q96L96 1907 aa18.9■□□□□ 0.62
SBDSP1-201ENST00000415772 MAGEB6P1A0A0J9YX57 407 aa18.89■□□□□ 0.61
SBDSP1-201ENST00000415772 CATSPERGQ6ZRH7 1159 aa18.89■□□□□ 0.61
SBDSP1-201ENST00000415772 EXOC6BQ9Y2D4 811 aa18.89■□□□□ 0.61
SBDSP1-201ENST00000415772 MYO5AQ9Y4I1 1855 aaKnown RBP18.88■□□□□ 0.61
SBDSP1-201ENST00000415772 SLC15A5A6NIM6 579 aa18.88■□□□□ 0.61
SBDSP1-201ENST00000415772 VCAM1P19320 739 aa18.88■□□□□ 0.61
SBDSP1-201ENST00000415772 DEFB123Q8N688 67 aa18.88■□□□□ 0.61
SBDSP1-201ENST00000415772 USP6NLQ92738 828 aa18.88■□□□□ 0.61
SBDSP1-201ENST00000415772 LBHD1Q9BQE6 289 aaPredicted RBP18.88■□□□□ 0.61
SBDSP1-201ENST00000415772 RPAP3Q9H6T3 665 aaPredicted RBP18.88■□□□□ 0.61
SBDSP1-201ENST00000415772 ANTXR1Q9H6X2 564 aa18.88■□□□□ 0.61
SBDSP1-201ENST00000415772 PRKAG2Q9UGJ0 569 aa18.88■□□□□ 0.61
SBDSP1-201ENST00000415772 PFASO15067 1338 aa18.88■□□□□ 0.61
SBDSP1-201ENST00000415772 MSCO60682 206 aa18.87■□□□□ 0.61
SBDSP1-201ENST00000415772 PTPREP23469 700 aa18.87■□□□□ 0.61
SBDSP1-201ENST00000415772 MNX1P50219 401 aaPredicted RBP18.87■□□□□ 0.61
SBDSP1-201ENST00000415772 GPR153Q6NV75 609 aa18.87■□□□□ 0.61
SBDSP1-201ENST00000415772 ZBED9Q6R2W3 1325 aa18.87■□□□□ 0.61
SBDSP1-201ENST00000415772 DPP9Q86TI2 863 aa18.87■□□□□ 0.61
SBDSP1-201ENST00000415772 TANGO6Q9C0B7 1094 aa18.87■□□□□ 0.61
SBDSP1-201ENST00000415772 MCM9Q9NXL9 1143 aa18.87■□□□□ 0.61
SBDSP1-201ENST00000415772 DLL1O00548 723 aa18.86■□□□□ 0.61
SBDSP1-201ENST00000415772 SLC9C2Q5TAH2 1124 aa18.86■□□□□ 0.61
SBDSP1-201ENST00000415772 CEP85Q6P2H3 762 aa18.86■□□□□ 0.61
SBDSP1-201ENST00000415772 ACER1Q8TDN7 264 aa18.86■□□□□ 0.61
SBDSP1-201ENST00000415772 DNAJC2Q99543 621 aaKnown RBP18.86■□□□□ 0.61
SBDSP1-201ENST00000415772 SENP6Q9GZR1 1112 aaPredicted RBP18.86■□□□□ 0.61
SBDSP1-201ENST00000415772 IL1RAPL2Q9NP60 686 aa18.86■□□□□ 0.61
SBDSP1-201ENST00000415772 APBB1O00213 710 aa18.85■□□□□ 0.61
SBDSP1-201ENST00000415772 IFIT2P09913 472 aaKnown RBP18.85■□□□□ 0.61
SBDSP1-201ENST00000415772 PLCD1P51178 756 aa18.85■□□□□ 0.61
SBDSP1-201ENST00000415772 MDM2Q00987 491 aaPredicted RBP18.85■□□□□ 0.61
SBDSP1-201ENST00000415772 SEPT2Q15019 361 aa18.85■□□□□ 0.61
SBDSP1-201ENST00000415772 LRRC26Q2I0M4 334 aa18.85■□□□□ 0.61
SBDSP1-201ENST00000415772 LRIT3Q3SXY7 679 aa18.85■□□□□ 0.61
SBDSP1-201ENST00000415772 LHX8Q68G74 356 aa18.85■□□□□ 0.61
SBDSP1-201ENST00000415772 AMOTL1Q8IY63 956 aa18.85■□□□□ 0.61
SBDSP1-201ENST00000415772 CLASRPQ8N2M8 674 aaKnown RBP18.85■□□□□ 0.61
SBDSP1-201ENST00000415772 SLC5A4Q9NY91 659 aa18.85■□□□□ 0.61
SBDSP1-201ENST00000415772 HOXC10Q9NYD6 342 aa18.85■□□□□ 0.61
SBDSP1-201ENST00000415772 DDX20Q9UHI6 824 aaKnown RBP18.85■□□□□ 0.61
SBDSP1-201ENST00000415772 CNMDO75829 334 aa18.84■□□□□ 0.61
SBDSP1-201ENST00000415772 MYCNP04198 464 aaPredicted RBP18.84■□□□□ 0.61
SBDSP1-201ENST00000415772 MS4A1P11836 297 aa18.84■□□□□ 0.61
SBDSP1-201ENST00000415772 COL6A1P12109 1028 aa18.84■□□□□ 0.61
SBDSP1-201ENST00000415772 SHMT1P34896 483 aa18.84■□□□□ 0.61
SBDSP1-201ENST00000415772 PLS1Q14651 629 aa18.84■□□□□ 0.61
SBDSP1-201ENST00000415772 BTBD7Q9P203 1132 aa18.84■□□□□ 0.61
SBDSP1-201ENST00000415772 SPDYE16A6NNV3 312 aaPredicted RBP18.83■□□□□ 0.6
SBDSP1-201ENST00000415772 RLBP1P12271 317 aa18.83■□□□□ 0.6
SBDSP1-201ENST00000415772 COG2Q14746 738 aa18.83■□□□□ 0.6
SBDSP1-201ENST00000415772 SAMD1Q6SPF0 538 aaPredicted RBP18.83■□□□□ 0.6
SBDSP1-201ENST00000415772 LBX2Q6XYB7 198 aa18.83■□□□□ 0.6
SBDSP1-201ENST00000415772 DDRGK1Q96HY6 314 aa18.83■□□□□ 0.6
SBDSP1-201ENST00000415772 RIOK1Q9BRS2 568 aaKnown RBP18.83■□□□□ 0.6
SBDSP1-201ENST00000415772 SH2D4AQ9H788 454 aa18.83■□□□□ 0.6
SBDSP1-201ENST00000415772 ARHGEF10LQ9HCE6 1279 aa18.83■□□□□ 0.6
SBDSP1-201ENST00000415772 NAV1Q8NEY1 1877 aa18.83■□□□□ 0.6
SBDSP1-201ENST00000415772 KBTBD13C9JR72 458 aa18.82■□□□□ 0.6
SBDSP1-201ENST00000415772 GOLIM4O00461 696 aa18.82■□□□□ 0.6
SBDSP1-201ENST00000415772 STRNO43815 780 aa18.82■□□□□ 0.6
SBDSP1-201ENST00000415772 HMMRO75330 724 aa18.82■□□□□ 0.6
SBDSP1-201ENST00000415772 PDE6AP16499 860 aa18.82■□□□□ 0.6
SBDSP1-201ENST00000415772 CYP2C19P33261 490 aa18.82■□□□□ 0.6
SBDSP1-201ENST00000415772 ATN1P54259 1190 aaPredicted RBP18.82■□□□□ 0.6
SBDSP1-201ENST00000415772 GRB14Q14449 540 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms