RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 MAP2K2P36507 400 aa20.54■□□□□ 0.88
CSNK1D-204ENST00000398519 GTF2A2P52657 109 aa20.54■□□□□ 0.88
CSNK1D-204ENST00000398519 SNAPC2Q13487 334 aa20.54■□□□□ 0.88
CSNK1D-204ENST00000398519 MANSC4A6NHS7 340 aaPredicted RBP20.53■□□□□ 0.88
CSNK1D-204ENST00000398519 E7EWF7 191 aa20.53■□□□□ 0.88
CSNK1D-204ENST00000398519 ICA1Q05084 483 aa20.53■□□□□ 0.88
CSNK1D-204ENST00000398519 SIAH1Q8IUQ4 282 aa20.53■□□□□ 0.88
CSNK1D-204ENST00000398519 ACER1Q8TDN7 264 aa20.53■□□□□ 0.88
CSNK1D-204ENST00000398519 KANSL2Q9H9L4 492 aa20.53■□□□□ 0.88
CSNK1D-204ENST00000398519 A0A0G2JLL6 359 aaPredicted RBP20.52■□□□□ 0.88
CSNK1D-204ENST00000398519 B4E1Z4 1266 aa20.52■□□□□ 0.88
CSNK1D-204ENST00000398519 EPB41L2O43491 1005 aaKnown RBP20.52■□□□□ 0.88
CSNK1D-204ENST00000398519 MTMR2Q13614 643 aa20.52■□□□□ 0.88
CSNK1D-204ENST00000398519 PRRT2Q7Z6L0 340 aaPredicted RBP20.52■□□□□ 0.88
CSNK1D-204ENST00000398519 ESR2Q92731 530 aa20.52■□□□□ 0.88
CSNK1D-204ENST00000398519 CEP95Q96GE4 821 aa20.52■□□□□ 0.88
CSNK1D-204ENST00000398519 USP26Q9BXU7 913 aa20.52■□□□□ 0.88
CSNK1D-204ENST00000398519 CNNM2Q9H8M5 875 aa20.52■□□□□ 0.88
CSNK1D-204ENST00000398519 CCL15-CCL14A0A0B4J2E2 113 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 A0A1W2PRG0 241 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 NMT2O60551 498 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 KDM4AO75164 1064 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 SEC24BO95487 1268 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 HSPA4P34932 840 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 BACE1P56817 501 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 DGKZQ13574 1117 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 MOGSQ13724 837 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 CCL15Q16663 113 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 RNF20Q5VTR2 975 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 BRI3BPQ8WY22 251 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 KRT23Q9C075 422 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 IL17RBQ9NRM6 502 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 TESPA1A2RU30 521 aaPredicted RBP20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 USP17L10C9JJH3 530 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 CETPP11597 493 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 EEF2P13639 858 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 NT5C2P49902 561 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 SREBF2Q12772 1141 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 RASEFQ8IZ41 740 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 MTMR4Q9NYA4 1195 aa20.51■□□□□ 0.87
CSNK1D-204ENST00000398519 LOC285556D6RIA3 1793 aa20.5■□□□□ 0.87
CSNK1D-204ENST00000398519 TM4SF4P48230 202 aa20.5■□□□□ 0.87
CSNK1D-204ENST00000398519 HMGCS2P54868 508 aa20.5■□□□□ 0.87
CSNK1D-204ENST00000398519 KCNB2Q92953 911 aa20.5■□□□□ 0.87
CSNK1D-204ENST00000398519 FEZ1Q99689 392 aa20.5■□□□□ 0.87
CSNK1D-204ENST00000398519 PTPN18Q99952 460 aa20.5■□□□□ 0.87
CSNK1D-204ENST00000398519 KIAA1683Q9H0B3 1180 aa20.5■□□□□ 0.87
CSNK1D-204ENST00000398519 ARHGEF10LQ9HCE6 1279 aa20.5■□□□□ 0.87
CSNK1D-204ENST00000398519 INHBEP58166 350 aa20.49■□□□□ 0.87
CSNK1D-204ENST00000398519 ATP2B2Q01814 1243 aa20.49■□□□□ 0.87
CSNK1D-204ENST00000398519 TRDNQ13061 729 aa20.49■□□□□ 0.87
CSNK1D-204ENST00000398519 ZYXQ15942 572 aaKnown RBP20.49■□□□□ 0.87
CSNK1D-204ENST00000398519 SH3D19Q5HYK7 790 aa20.49■□□□□ 0.87
CSNK1D-204ENST00000398519 REM2Q8IYK8 340 aaPredicted RBP20.49■□□□□ 0.87
CSNK1D-204ENST00000398519 NCOA7Q8NI08 942 aa20.49■□□□□ 0.87
CSNK1D-204ENST00000398519 TCP11L1Q9NUJ3 509 aa20.49■□□□□ 0.87
CSNK1D-204ENST00000398519 ZSWIM5Q9P217 1185 aa20.49■□□□□ 0.87
CSNK1D-204ENST00000398519 NYAP2Q9P242 653 aa20.49■□□□□ 0.87
CSNK1D-204ENST00000398519 C19orf81C9J6K1 198 aa20.48■□□□□ 0.87
CSNK1D-204ENST00000398519 IGF2BP3O00425 579 aaKnown RBP eCLIP20.48■□□□□ 0.87
CSNK1D-204ENST00000398519 TSGA10IPQ3SY00 556 aa20.48■□□□□ 0.87
CSNK1D-204ENST00000398519 RALYLQ86SE5 291 aaKnown RBP20.48■□□□□ 0.87
CSNK1D-204ENST00000398519 EMILIN3Q9NT22 766 aa20.48■□□□□ 0.87
CSNK1D-204ENST00000398519 TMX2Q9Y320 296 aa20.48■□□□□ 0.87
CSNK1D-204ENST00000398519 EIF5BO60841 1220 aaKnown RBP20.47■□□□□ 0.87
CSNK1D-204ENST00000398519 TTLL1O95922 423 aa20.47■□□□□ 0.87
CSNK1D-204ENST00000398519 ZKSCAN1P17029 563 aaPredicted RBP20.47■□□□□ 0.87
CSNK1D-204ENST00000398519 NOVP48745 357 aa20.47■□□□□ 0.87
CSNK1D-204ENST00000398519 COL9A3Q14050 684 aaPredicted RBP20.47■□□□□ 0.87
CSNK1D-204ENST00000398519 GADL1Q6ZQY3 521 aa20.47■□□□□ 0.87
CSNK1D-204ENST00000398519 CYB5R4Q7L1T6 521 aa20.47■□□□□ 0.87
CSNK1D-204ENST00000398519 JMYQ8N9B5 988 aa20.47■□□□□ 0.87
CSNK1D-204ENST00000398519 ZKSCAN3Q9BRR0 538 aa20.47■□□□□ 0.87
CSNK1D-204ENST00000398519 CLIP2Q9UDT6 1046 aa20.47■□□□□ 0.87
CSNK1D-204ENST00000398519 MYH4Q9Y623 1939 aa20.47■□□□□ 0.87
CSNK1D-204ENST00000398519 BTBD19C9JJ37 291 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 ADCK5Q3MIX3 580 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 USP17L2Q6R6M4 530 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 FASTKD5Q7L8L6 764 aaKnown RBP20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 IFNL1Q8IU54 200 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 MB21D2Q8IYB1 491 aaPredicted RBP20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 FAM43AQ8N2R8 423 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 PROCA1Q8NCQ7 364 aaPredicted RBP20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 SH2D4AQ9H788 454 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 STX8Q9UNK0 236 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 SNX14Q9Y5W7 946 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 USP14P54578 494 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 TREML2Q5T2D2 321 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 GPAT2Q6NUI2 795 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 IQCA1Q86XH1 822 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 MKL1Q969V6 931 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 C12orf42Q96LP6 360 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 TMOD4Q9NZQ9 345 aa20.46■□□□□ 0.87
CSNK1D-204ENST00000398519 KIAA1755Q5JYT7 1200 aa20.45■□□□□ 0.86
CSNK1D-204ENST00000398519 PPP4R3BQ5MIZ7 849 aa20.45■□□□□ 0.86
CSNK1D-204ENST00000398519 RCSD1Q6JBY9 416 aa20.45■□□□□ 0.86
CSNK1D-204ENST00000398519 LRRC47Q8N1G4 583 aaKnown RBP20.45■□□□□ 0.86
CSNK1D-204ENST00000398519 ZSCAN10Q96SZ4 725 aaPredicted RBP20.45■□□□□ 0.86
CSNK1D-204ENST00000398519 AGTPBP1Q9UPW5 1226 aa20.45■□□□□ 0.86
CSNK1D-204ENST00000398519 ANTXR2P58335 489 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms