RNA–Protein interactions for RNA: ENST00000392894.7

RNF13-203, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,843 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-203ENST00000392894 CNNM2Q9H8M5 875 aa14.1□□□□□ -0.15
RNF13-203ENST00000392894 SRPRBQ9Y5M8 271 aaKnown RBP14.1□□□□□ -0.15
RNF13-203ENST00000392894 ABCC12Q96J65 1359 aa14.1□□□□□ -0.15
RNF13-203ENST00000392894 CDHR2Q9BYE9 1310 aa14.1□□□□□ -0.15
RNF13-203ENST00000392894 AKR1B15C9JRZ8 316 aaPredicted RBP14.1□□□□□ -0.15
RNF13-203ENST00000392894 CYP2D6P10635 497 aa14.1□□□□□ -0.15
RNF13-203ENST00000392894 FXR1P51114 621 aaKnown RBP eCLIP14.1□□□□□ -0.15
RNF13-203ENST00000392894 PTGDRQ13258 359 aa14.1□□□□□ -0.15
RNF13-203ENST00000392894 IFIT1BQ5T764 474 aaKnown RBP14.1□□□□□ -0.15
RNF13-203ENST00000392894 WASF1Q92558 559 aa14.1□□□□□ -0.15
RNF13-203ENST00000392894 ARGLU1Q9NWB6 273 aaPredicted RBP14.1□□□□□ -0.15
RNF13-203ENST00000392894 TAB2Q9NYJ8 693 aa14.1□□□□□ -0.15
RNF13-203ENST00000392894 SYNRGQ9UMZ2 1314 aa14.09□□□□□ -0.15
RNF13-203ENST00000392894 ATP6V1AP38606 617 aa14.09□□□□□ -0.15
RNF13-203ENST00000392894 IGHMBP2P38935 993 aaKnown RBP14.09□□□□□ -0.15
RNF13-203ENST00000392894 NR1I3Q14994 352 aa14.09□□□□□ -0.15
RNF13-203ENST00000392894 PKN1Q16512 942 aa14.09□□□□□ -0.15
RNF13-203ENST00000392894 MLKLQ8NB16 471 aa14.09□□□□□ -0.15
RNF13-203ENST00000392894 ENOX1Q8TC92 643 aaKnown RBP14.09□□□□□ -0.15
RNF13-203ENST00000392894 FOXP1Q9H334 677 aaPredicted RBP14.09□□□□□ -0.15
RNF13-203ENST00000392894 TRIM10Q9UDY6 481 aa14.09□□□□□ -0.15
RNF13-203ENST00000392894 STRCP1A6NGW2 1772 aa14.09□□□□□ -0.15
RNF13-203ENST00000392894 MAGEB6P1A0A0J9YX57 407 aa14.09□□□□□ -0.15
RNF13-203ENST00000392894 SARSP49591 514 aaKnown RBP14.09□□□□□ -0.15
RNF13-203ENST00000392894 RRAGBQ5VZM2 374 aa14.09□□□□□ -0.15
RNF13-203ENST00000392894 STAG1Q8WVM7 1258 aa14.09□□□□□ -0.15
RNF13-203ENST00000392894 KIFC2Q96AC6 838 aa14.09□□□□□ -0.15
RNF13-203ENST00000392894 TFCP2L1Q9NZI6 479 aa14.09□□□□□ -0.15
RNF13-203ENST00000392894 MROH5Q6ZUA9 1318 aa14.08□□□□□ -0.15
RNF13-203ENST00000392894 ZNF335Q9H4Z2 1342 aaPredicted RBP14.08□□□□□ -0.15
RNF13-203ENST00000392894 USP17L12C9JPN9 530 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 USP17L21D6R901 530 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 TBC1D8O95759 1140 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 ERCC3P19447 782 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 OAS2P29728 719 aaKnown RBP14.08□□□□□ -0.16
RNF13-203ENST00000392894 PLCD1P51178 756 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 CUL4BQ13620 913 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 GPKOWQ92917 476 aaPredicted RBP eCLIP14.08□□□□□ -0.16
RNF13-203ENST00000392894 AATFQ9NY61 560 aaKnown RBP eCLIP14.08□□□□□ -0.16
RNF13-203ENST00000392894 TNS2Q63HR2 1409 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 PP2D1A8MPX8 630 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 EFCAB8A8MWE9 144 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 CCP110O43303 1012 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 STX10O60499 249 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 PHACTR2O75167 634 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 ZRANB2O95218 330 aaKnown RBP eCLIP14.08□□□□□ -0.16
RNF13-203ENST00000392894 MAP3K9P80192 1104 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 SKIDA1Q1XH10 827 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 KIF4BQ2VIQ3 1234 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 FAM53CQ9NYF3 392 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 GDAQ9Y2T3 454 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 MRFAP1Q9Y605 127 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 LMTK3Q96Q04 1460 aa14.08□□□□□ -0.16
RNF13-203ENST00000392894 FAM237AA0A1B0GTK4 181 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 TRIM49BA6NDI0 452 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 KRT2P35908 639 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 CC2D1AQ6P1N0 951 aaPredicted RBP14.07□□□□□ -0.16
RNF13-203ENST00000392894 RASSF8Q8NHQ8 419 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 ESR2Q92731 530 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 SLF1Q9BQI6 1058 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 ECM29Q5VYK3 1845 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 N4BP3O15049 544 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 ALX1Q15699 326 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 ZNF34Q8IZ26 560 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 GDAP1L1Q96MZ0 367 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 ZSCAN10Q96SZ4 725 aaPredicted RBP14.07□□□□□ -0.16
RNF13-203ENST00000392894 NUP88Q99567 741 aaPredicted RBP14.07□□□□□ -0.16
RNF13-203ENST00000392894 CPVLQ9H3G5 476 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 MYH2Q9UKX2 1941 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 SPEF2Q9C093 1822 aa14.07□□□□□ -0.16
RNF13-203ENST00000392894 ZNF142P52746 1687 aaPredicted RBP14.06□□□□□ -0.16
RNF13-203ENST00000392894 EXOC5O00471 708 aa14.06□□□□□ -0.16
RNF13-203ENST00000392894 ENC1O14682 589 aa14.06□□□□□ -0.16
RNF13-203ENST00000392894 ADAMTS2O95450 1211 aa14.06□□□□□ -0.16
RNF13-203ENST00000392894 CCDC175P0C221 793 aa14.06□□□□□ -0.16
RNF13-203ENST00000392894 DHX8Q14562 1220 aaKnown RBP14.06□□□□□ -0.16
RNF13-203ENST00000392894 RASGRP2Q7LDG7 609 aa14.06□□□□□ -0.16
RNF13-203ENST00000392894 CCDC196A0A1B0GTZ2 297 aa14.06□□□□□ -0.16
RNF13-203ENST00000392894 CRKLP46109 303 aaKnown RBP14.06□□□□□ -0.16
RNF13-203ENST00000392894 NLRP5P59047 1200 aa14.06□□□□□ -0.16
RNF13-203ENST00000392894 APTXQ7Z2E3 356 aaKnown RBP14.06□□□□□ -0.16
RNF13-203ENST00000392894 CATIPQ7Z7H3 387 aa14.06□□□□□ -0.16
RNF13-203ENST00000392894 SLC35F6Q8N357 371 aa14.06□□□□□ -0.16
RNF13-203ENST00000392894 ZNF512BQ96KM6 892 aaPredicted RBP14.06□□□□□ -0.16
RNF13-203ENST00000392894 ADGRG1Q9Y653 693 aa14.06□□□□□ -0.16
RNF13-203ENST00000392894 STK36Q9NRP7 1315 aa14.06□□□□□ -0.16
RNF13-203ENST00000392894 A0A1B0GTH6 734 aa14.05□□□□□ -0.16
RNF13-203ENST00000392894 GYPCP04921 128 aa14.05□□□□□ -0.16
RNF13-203ENST00000392894 KCNJ6P48051 423 aa14.05□□□□□ -0.16
RNF13-203ENST00000392894 SMC1AQ14683 1233 aaKnown RBP14.05□□□□□ -0.16
RNF13-203ENST00000392894 SEC23AQ15436 765 aa14.05□□□□□ -0.16
RNF13-203ENST00000392894 TTC38Q5R3I4 469 aa14.05□□□□□ -0.16
RNF13-203ENST00000392894 SRBD1Q8N5C6 995 aaKnown RBP14.05□□□□□ -0.16
RNF13-203ENST00000392894 DACH1Q9UI36 760 aa14.05□□□□□ -0.16
RNF13-203ENST00000392894 SLIT2O94813 1529 aa14.05□□□□□ -0.16
RNF13-203ENST00000392894 PPP1R3GB7ZBB8 358 aa14.05□□□□□ -0.16
RNF13-203ENST00000392894 N4BP1O75113 896 aaKnown RBP14.05□□□□□ -0.16
RNF13-203ENST00000392894 GTF2E1P29083 439 aaPredicted RBP14.05□□□□□ -0.16
RNF13-203ENST00000392894 HNRNPH2P55795 449 aaKnown RBP14.05□□□□□ -0.16
RNF13-203ENST00000392894 TICAM2Q86XR7 235 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms