RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 GNGT1P63211 74 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 LETM2Q2VYF4 491 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 GBP7Q8N8V2 638 aaPredicted RBP10.6□□□□□ -0.71
SNX1-202ENST00000380285 EXOC4Q96A65 974 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 IQSEC3Q9UPP2 1182 aaPredicted RBP10.6□□□□□ -0.71
SNX1-202ENST00000380285 CLASP1Q7Z460 1538 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 N4BP1O75113 896 aaKnown RBP10.6□□□□□ -0.71
SNX1-202ENST00000380285 STX2P32856 288 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 KRT5P13647 590 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 CCDC105Q8IYK2 499 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 PZPP20742 1482 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 RETREG2Q8NC44 543 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 VTI1AQ96AJ9 217 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 HVCN1Q96D96 273 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 EFCC1Q9HA90 598 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 TMOD4Q9NZQ9 345 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 BAIAP2L1Q9UHR4 511 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 ABCA5Q8WWZ7 1642 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 GIPC1O14908 333 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 ANXA1P04083 346 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 YWHAEP62258 255 aaKnown RBP10.59□□□□□ -0.71
SNX1-202ENST00000380285 MBD4O95243 580 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 NONOQ15233 471 aaKnown RBP eCLIP10.59□□□□□ -0.71
SNX1-202ENST00000380285 PARP10Q53GL7 1025 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 MYSM1Q5VVJ2 828 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 OGFOD1Q8N543 542 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 KIFC2Q96AC6 838 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 SLF1Q9BQI6 1058 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 SPZ1Q9BXG8 430 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 ATP10BO94823 1461 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 IRS4O14654 1257 aaPredicted RBP10.59□□□□□ -0.71
SNX1-202ENST00000380285 CRCPO75575 148 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 PCP11498 1178 aaKnown RBP10.59□□□□□ -0.71
SNX1-202ENST00000380285 ATP5JP18859 108 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 KRT40Q6A162 431 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 CTTNBP2NLQ9P2B4 639 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 TACC3Q9Y6A5 838 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 IKBKBO14920 756 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 KRT15P19012 456 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 PPM1FP49593 454 aaPredicted RBP10.59□□□□□ -0.71
SNX1-202ENST00000380285 RBBP5Q15291 538 aaKnown RBP10.59□□□□□ -0.71
SNX1-202ENST00000380285 PCDH11XQ9BZA7 1347 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 PCDH11YQ9BZA8 1340 aa10.59□□□□□ -0.71
SNX1-202ENST00000380285 CCDC151A5D8V7 595 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 GPAA1O43292 621 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 PPP4R1Q8TF05 950 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 ZSWIM6Q9HCJ5 1215 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 CDC23Q9UJX2 597 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 ZNF215Q9UL58 517 aaPredicted RBP10.58□□□□□ -0.72
SNX1-202ENST00000380285 KCNJ18B7U540 433 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 KCNJ12Q14500 433 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 SLMAPQ14BN4 828 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 UAP1Q16222 522 aaPredicted RBP10.58□□□□□ -0.72
SNX1-202ENST00000380285 DNM3Q9UQ16 869 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 MAST3O60307 1309 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 PFKFB2O60825 505 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 STMN1P16949 149 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 AP1ARQ63HQ0 302 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 PIK3AP1Q6ZUJ8 805 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 BCAS4Q8TDM0 211 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 CUEDC2Q9H467 287 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 EIF4G3O43432 1585 aaKnown RBP10.58□□□□□ -0.72
SNX1-202ENST00000380285 RNMTO43148 476 aaKnown RBP10.58□□□□□ -0.72
SNX1-202ENST00000380285 GCKP35557 465 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 CALCRLQ16602 461 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 TPTE2Q6XPS3 522 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 CNOT10Q9H9A5 744 aaKnown RBP10.58□□□□□ -0.72
SNX1-202ENST00000380285 BICRAQ9NZM4 1560 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 B4E1Z4 1266 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 EIF3CLB5ME19 914 aaKnown RBP10.58□□□□□ -0.72
SNX1-202ENST00000380285 ZBTB17Q13105 803 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 EIF3CQ99613 913 aaKnown RBP10.58□□□□□ -0.72
SNX1-202ENST00000380285 TUBB6Q9BUF5 446 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 TAB2Q9NYJ8 693 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 SUN1O94901 812 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 SPATA1Q5VX52 437 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 TEKT1Q969V4 418 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 EPSTI1Q96J88 318 aa10.58□□□□□ -0.72
SNX1-202ENST00000380285 MICAL1Q8TDZ2 1067 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 A0A087WUV0 522 aaPredicted RBP10.57□□□□□ -0.72
SNX1-202ENST00000380285 STAT1P42224 750 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 CWF19L2Q2TBE0 894 aaKnown RBP10.57□□□□□ -0.72
SNX1-202ENST00000380285 ACTR5Q9H9F9 607 aaPredicted RBP10.57□□□□□ -0.72
SNX1-202ENST00000380285 MROH5Q6ZUA9 1318 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 MYL1P05976 194 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 CCDC89Q8N998 374 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 CARD14Q9BXL6 1004 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 KIF1BO60333 1816 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 LRRD1A4D1F6 860 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 LMNB2Q03252 620 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 MORC3Q14149 939 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 ZNF354CQ86Y25 554 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 EYA3Q99504 573 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 HAUS8Q9BT25 410 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 RIC8AQ9NPQ8 531 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 LRWD1Q9UFC0 647 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 SBNO2Q9Y2G9 1366 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 WDR7Q9Y4E6 1490 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 SEPT14Q6ZU15 432 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 IP6K1Q92551 441 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms