RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 MAGEB6Q8N7X4 407 aa11.5□□□□□ -0.57
USP11-203ENST00000377080 SLC4A9Q96Q91 983 aa11.5□□□□□ -0.57
USP11-203ENST00000377080 TUBB2BQ9BVA1 445 aa11.5□□□□□ -0.57
USP11-203ENST00000377080 NAA15Q9BXJ9 866 aaKnown RBP11.5□□□□□ -0.57
USP11-203ENST00000377080 SLC26A6Q9BXS9 759 aa11.5□□□□□ -0.57
USP11-203ENST00000377080 EPB41L4AQ9HCS5 686 aaPredicted RBP11.5□□□□□ -0.57
USP11-203ENST00000377080 GNL3LQ9NVN8 582 aaKnown RBP11.5□□□□□ -0.57
USP11-203ENST00000377080 RBM28Q9NW13 759 aaKnown RBP11.5□□□□□ -0.57
USP11-203ENST00000377080 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.5□□□□□ -0.57
USP11-203ENST00000377080 ZNF804BA4D1E1 1349 aa11.5□□□□□ -0.57
USP11-203ENST00000377080 BRCA1P38398 1863 aaKnown RBP11.5□□□□□ -0.57
USP11-203ENST00000377080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.49□□□□□ -0.57
USP11-203ENST00000377080 GPTP24298 496 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 LMOD1P29536 600 aaPredicted RBP11.49□□□□□ -0.57
USP11-203ENST00000377080 IGHMBP2P38935 993 aaKnown RBP11.49□□□□□ -0.57
USP11-203ENST00000377080 TRAPPC10P48553 1259 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 CBX1P83916 185 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 BMS1Q14692 1282 aaKnown RBP11.49□□□□□ -0.57
USP11-203ENST00000377080 SEC23AQ15436 765 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 TRIM65Q6PJ69 517 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 SH3RF1Q7Z6J0 888 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 MICU3Q86XE3 530 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 REXO1L1PQ8IX06 675 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 DIS3L2Q8IYB7 885 aaKnown RBP11.49□□□□□ -0.57
USP11-203ENST00000377080 KRT222Q8N1A0 295 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 LINC00116Q8NCU8 138 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 SMC1BQ8NDV3 1235 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 ZNF592Q92610 1267 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 ESR2Q92731 530 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 PHKBQ93100 1093 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 SMARCE1Q969G3 411 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 PKNOX2Q96KN3 472 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 AIFM3Q96NN9 605 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 BRIP1Q9BX63 1249 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 GJB4Q9NTQ9 266 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 FANCLQ9NW38 375 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 MAN1B1Q9UKM7 699 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 ARFGEF1Q9Y6D6 1849 aa11.49□□□□□ -0.57
USP11-203ENST00000377080 LOC102724428A0A0B4J2F2 783 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 EFCAB8A8MWE9 144 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 BTBD18B2RXH4 712 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 BIN1O00499 593 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 PLCD1P51178 756 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 SIK1P57059 783 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 PPARAQ07869 468 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 PNOCQ13519 176 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 UBE4AQ14139 1066 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 NR1I3Q14994 352 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 CFAP100Q494V2 611 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 TAF3Q5VWG9 929 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 C9orf131Q5VYM1 1079 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 SPECC1LQ69YQ0 1117 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 CLEC4GQ6UXB4 293 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 ERCC4Q92889 916 aaPredicted RBP11.48□□□□□ -0.57
USP11-203ENST00000377080 CCDC51Q96ER9 411 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 GSDMAQ96QA5 445 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 PANX2Q96RD6 677 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 CTAGE1Q96RT6 745 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 RRAGCQ9HB90 399 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 TRMT1Q9NXH9 659 aaKnown RBP11.48□□□□□ -0.57
USP11-203ENST00000377080 DNAI1Q9UI46 699 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 ZBTB1Q9Y2K1 713 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 SLC4A4Q9Y6R1 1079 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 C10orf71Q711Q0 1435 aa11.48□□□□□ -0.57
USP11-203ENST00000377080 COL5A3P25940 1745 aaPredicted RBP11.47□□□□□ -0.57
USP11-203ENST00000377080 FAM177BA6PVY3 158 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 DDAH1O94760 285 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 SLFN14P0C7P3 912 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 TDO2P48775 406 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 ITPK1Q13572 414 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 SF3B3Q15393 1217 aaKnown RBP11.47□□□□□ -0.57
USP11-203ENST00000377080 KMT5BQ4FZB7 885 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 SPATA1Q5VX52 437 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 SUSD4Q5VX71 490 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 INTS5Q6P9B9 1019 aaKnown RBP11.47□□□□□ -0.57
USP11-203ENST00000377080 TMEM139Q8IV31 216 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 ZNF654Q8IZM8 581 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 CCDC85AQ96PX6 553 aaPredicted RBP11.47□□□□□ -0.57
USP11-203ENST00000377080 UBAC1Q9BSL1 405 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 ARMT1Q9H993 441 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 SENP2Q9HC62 589 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 CCDC87Q9NVE4 849 aa11.47□□□□□ -0.57
USP11-203ENST00000377080 ARGLU1Q9NWB6 273 aaPredicted RBP11.47□□□□□ -0.57
USP11-203ENST00000377080 ITIH6Q6UXX5 1313 aa11.46□□□□□ -0.57
USP11-203ENST00000377080 A0A087WWV3 80 aa11.46□□□□□ -0.57
USP11-203ENST00000377080 A0A1B0GTH6 734 aa11.46□□□□□ -0.57
USP11-203ENST00000377080 LRRC10BA6NIK2 292 aa11.46□□□□□ -0.57
USP11-203ENST00000377080 TRIM75PA6NK02 468 aa11.46□□□□□ -0.57
USP11-203ENST00000377080 GNPATO15228 680 aa11.46□□□□□ -0.57
USP11-203ENST00000377080 ACTN4O43707 911 aaKnown RBP11.46□□□□□ -0.57
USP11-203ENST00000377080 ORC4O43929 436 aa11.46□□□□□ -0.57
USP11-203ENST00000377080 ATP1A3P13637 1013 aa11.46□□□□□ -0.57
USP11-203ENST00000377080 BMP6P22004 513 aa11.46□□□□□ -0.57
USP11-203ENST00000377080 FECHP22830 423 aa11.46□□□□□ -0.57
USP11-203ENST00000377080 ATP6V1AP38606 617 aa11.46□□□□□ -0.57
USP11-203ENST00000377080 TGFB2P61812 414 aa11.46□□□□□ -0.57
USP11-203ENST00000377080 AKAP17AQ02040 695 aaKnown RBP11.46□□□□□ -0.57
USP11-203ENST00000377080 CTDSPL2Q05D32 466 aa11.46□□□□□ -0.57
USP11-203ENST00000377080 FUT2Q10981 343 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms