RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 GYG1P46976 350 aa19.8■□□□□ 0.76
PTP4A3-201ENST00000329397 DYNLL1P63167 89 aaKnown RBP19.8■□□□□ 0.76
PTP4A3-201ENST00000329397 PPP2R3AQ06190 1150 aa19.8■□□□□ 0.76
PTP4A3-201ENST00000329397 NUTM2AQ8IVF1 878 aaPredicted RBP19.8■□□□□ 0.76
PTP4A3-201ENST00000329397 CCDC12Q8WUD4 166 aaPredicted RBP19.8■□□□□ 0.76
PTP4A3-201ENST00000329397 SYMPKQ92797 1274 aaKnown RBP19.8■□□□□ 0.76
PTP4A3-201ENST00000329397 BLZF1Q9H2G9 400 aa19.8■□□□□ 0.76
PTP4A3-201ENST00000329397 DHX8Q14562 1220 aaKnown RBP19.79■□□□□ 0.76
PTP4A3-201ENST00000329397 NT5DC1Q5TFE4 455 aa19.79■□□□□ 0.76
PTP4A3-201ENST00000329397 ZNF34Q8IZ26 560 aa19.79■□□□□ 0.76
PTP4A3-201ENST00000329397 KIFC2Q96AC6 838 aa19.79■□□□□ 0.76
PTP4A3-201ENST00000329397 STX10O60499 249 aa19.79■□□□□ 0.76
PTP4A3-201ENST00000329397 CCT6AP40227 531 aaKnown RBP19.79■□□□□ 0.76
PTP4A3-201ENST00000329397 PLCD1P51178 756 aa19.79■□□□□ 0.76
PTP4A3-201ENST00000329397 RBL2Q08999 1139 aa19.79■□□□□ 0.76
PTP4A3-201ENST00000329397 DPYDQ12882 1025 aa19.79■□□□□ 0.76
PTP4A3-201ENST00000329397 NR1I3Q14994 352 aa19.79■□□□□ 0.76
PTP4A3-201ENST00000329397 RAD9BQ6WBX8 426 aa19.79■□□□□ 0.76
PTP4A3-201ENST00000329397 ANKRD36CQ5JPF3 1778 aa19.79■□□□□ 0.76
PTP4A3-201ENST00000329397 COL4A1P02462 1669 aa19.79■□□□□ 0.76
PTP4A3-201ENST00000329397 EFCAB8A8MWE9 144 aa19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 ADAMTS3O15072 1205 aa19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 PKN1Q16512 942 aa19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 ENAHQ8N8S7 591 aaPredicted RBP19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 XIRP1Q702N8 1843 aaKnown RBP19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 NMT2O60551 498 aa19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 AKAP17AQ02040 695 aaKnown RBP19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 MRFAP1Q9Y605 127 aa19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 MYH8P13535 1937 aa19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 SYNRGQ9UMZ2 1314 aa19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 TRIM75PA6NK02 468 aa19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 ABL1P00519 1130 aa19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 VEGFAP15692 232 aaPredicted RBP19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 CDC25AP30304 524 aa19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 MAP3K9P80192 1104 aa19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 APTXQ7Z2E3 356 aaKnown RBP19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 IGSF22Q8N9C0 903 aa19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 ARGLU1Q9NWB6 273 aaPredicted RBP19.78■□□□□ 0.76
PTP4A3-201ENST00000329397 CHRNDQ07001 517 aa19.77■□□□□ 0.76
PTP4A3-201ENST00000329397 PAGE5Q96GU1 130 aa19.77■□□□□ 0.76
PTP4A3-201ENST00000329397 PUF60Q9UHX1 559 aaKnown RBP19.77■□□□□ 0.76
PTP4A3-201ENST00000329397 DOCK2Q92608 1830 aa19.77■□□□□ 0.76
PTP4A3-201ENST00000329397 TAF1P21675 1872 aa19.77■□□□□ 0.76
PTP4A3-201ENST00000329397 MAPK8IP2Q13387 824 aaPredicted RBP19.77■□□□□ 0.75
PTP4A3-201ENST00000329397 SEC23AQ15436 765 aa19.77■□□□□ 0.75
PTP4A3-201ENST00000329397 FCHSD1Q86WN1 690 aa19.77■□□□□ 0.75
PTP4A3-201ENST00000329397 ACSBG1Q96GR2 724 aa19.77■□□□□ 0.75
PTP4A3-201ENST00000329397 DACH1Q9UI36 760 aa19.77■□□□□ 0.75
PTP4A3-201ENST00000329397 MAPK8IP1Q9UQF2 711 aa19.77■□□□□ 0.75
PTP4A3-201ENST00000329397 BCL9O00512 1426 aa19.77■□□□□ 0.75
PTP4A3-201ENST00000329397 CCDC196A0A1B0GTZ2 297 aa19.76■□□□□ 0.75
PTP4A3-201ENST00000329397 ZBTB22O15209 634 aa19.76■□□□□ 0.75
PTP4A3-201ENST00000329397 A0A1B0GTH6 734 aa19.76■□□□□ 0.75
PTP4A3-201ENST00000329397 AKR1B15C9JRZ8 316 aaPredicted RBP19.76■□□□□ 0.75
PTP4A3-201ENST00000329397 TUBB4AP04350 444 aa19.76■□□□□ 0.75
PTP4A3-201ENST00000329397 GYS2P54840 703 aa19.76■□□□□ 0.75
PTP4A3-201ENST00000329397 CTNND2Q9UQB3 1225 aa19.76■□□□□ 0.75
PTP4A3-201ENST00000329397 TBC1D8O95759 1140 aa19.75■□□□□ 0.75
PTP4A3-201ENST00000329397 PARD6BQ9BYG5 372 aa19.75■□□□□ 0.75
PTP4A3-201ENST00000329397 PNPLA7Q6ZV29 1317 aa19.75■□□□□ 0.75
PTP4A3-201ENST00000329397 ZNF335Q9H4Z2 1342 aaPredicted RBP19.75■□□□□ 0.75
PTP4A3-201ENST00000329397 CASP14P31944 242 aa19.75■□□□□ 0.75
PTP4A3-201ENST00000329397 SPATA20Q8TB22 786 aa19.75■□□□□ 0.75
PTP4A3-201ENST00000329397 SRRTQ9BXP5 876 aaKnown RBP19.75■□□□□ 0.75
PTP4A3-201ENST00000329397 TIAM2Q8IVF5 1701 aa19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 MAGEB6P1A0A0J9YX57 407 aa19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 KRT2P35908 639 aa19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 IGHMBP2P38935 993 aaKnown RBP19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 IL6STP40189 918 aaPredicted RBP19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 FXR1P51114 621 aaKnown RBP eCLIP19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 CC2D1AQ6P1N0 951 aaPredicted RBP19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 ZNF579Q8NAF0 562 aaKnown RBP19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 ACRBPQ8NEB7 543 aa19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 ESR2Q92731 530 aa19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 CEP131Q9UPN4 1083 aa19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 GNAT2P19087 354 aa19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 CUL4BQ13620 913 aa19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 IFIT1BQ5T764 474 aaKnown RBP19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 SMIM5Q71RC9 77 aa19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 JAG2Q9Y219 1238 aa19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 NIP7Q9Y221 180 aaKnown RBP eCLIP19.74■□□□□ 0.75
PTP4A3-201ENST00000329397 MYO1BO43795 1136 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 CCDC175P0C221 793 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 NEK11Q8NG66 645 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 TRERF1Q96PN7 1200 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 RNF26Q9BY78 433 aaPredicted RBP19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 RNF41Q9H4P4 317 aaPredicted RBP19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 ABCA3Q99758 1704 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 NID2Q14112 1375 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 ERVV-1B6SEH8 477 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 RNF225M0QZC1 329 aaPredicted RBP19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 ST5P78524 1137 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 FUT2Q10981 343 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 PTGDRQ13258 359 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 FAM47AQ5JRC9 791 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 PPFIBP1Q86W92 1011 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 TRIML1Q8N9V2 468 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 ZSCAN10Q96SZ4 725 aaPredicted RBP19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 PHF20Q9BVI0 1012 aa19.73■□□□□ 0.75
PTP4A3-201ENST00000329397 ADD3Q9UEY8 706 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms