RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 KLHL33A6NCF5 533 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 IMPDH2P12268 514 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 KCNA2P16389 499 aa8.65□□□□□ -1.02
RSF1-201ENST00000308488 IL16Q14005 1332 aa8.65□□□□□ -1.03
RSF1-201ENST00000308488 KRT13P13646 458 aa8.65□□□□□ -1.03
RSF1-201ENST00000308488 NDUFA5Q16718 116 aa8.65□□□□□ -1.03
RSF1-201ENST00000308488 KLC3Q6P597 504 aa8.65□□□□□ -1.03
RSF1-201ENST00000308488 PARP2Q9UGN5 583 aa8.65□□□□□ -1.03
RSF1-201ENST00000308488 GMNCA6NCL1 334 aa8.65□□□□□ -1.03
RSF1-201ENST00000308488 FTOQ9C0B1 505 aaKnown RBP eCLIP8.65□□□□□ -1.03
RSF1-201ENST00000308488 KCNG1Q9UIX4 513 aa8.65□□□□□ -1.03
RSF1-201ENST00000308488 TRIM60Q495X7 471 aa8.65□□□□□ -1.03
RSF1-201ENST00000308488 AACSQ86V21 672 aa8.65□□□□□ -1.03
RSF1-201ENST00000308488 STRN4Q9NRL3 753 aa8.65□□□□□ -1.03
RSF1-201ENST00000308488 SH3BP5O60239 455 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 OSBPL5Q9H0X9 879 aaPredicted RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 ZRANB1Q9UGI0 708 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 ERCC6Q03468 1493 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 EIF4G1Q04637 1599 aaKnown RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 SYNRGQ9UMZ2 1314 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 SPAG7O75391 227 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 KRT23Q9C075 422 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 NDE1Q9NXR1 346 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 PSMA7O14818 248 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 WDR46O15213 610 aaKnown RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 GGCXP38435 758 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 SESTD1Q86VW0 696 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 MMADHCQ9H3L0 296 aaPredicted RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 KDM4CQ9H3R0 1056 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 GIMAP4Q9NUV9 329 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 TRAF3IP3Q9Y228 551 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 ARHGAP42A6NI28 874 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 OCA2Q04671 838 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 TTC39AQ5SRH9 613 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 OLFML2BQ68BL8 750 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 NUDCD3Q8IVD9 361 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 ARL10Q8N8L6 244 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 TRAPPC9Q96Q05 1148 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 NUP58Q9BVL2 599 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 CORO1CQ9ULV4 474 aaPredicted RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 TCP1P17987 556 aaKnown RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 FNBP4Q8N3X1 1017 aaPredicted RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 TSNARE1Q96NA8 513 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 GPR101Q96P66 508 aaPredicted RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 FERMT1Q9BQL6 677 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 CASKIN1Q8WXD9 1431 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 KCTD16Q68DU8 428 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 EIF2S1P05198 315 aaKnown RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 PDE6CP51160 858 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 SNX1Q13596 522 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 BTN2A1Q7KYR7 527 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 HEATR3Q7Z4Q2 680 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 HELBQ8NG08 1087 aaPredicted RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 SNRNP27Q8WVK2 155 aaKnown RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 NRBP1Q9UHY1 535 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 MYO1FO00160 1098 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 KPNB1Q14974 876 aaKnown RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 SARM1Q6SZW1 724 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 NOD2Q9HC29 1040 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 LSM1O15116 133 aaKnown RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 MSL3P1P0C860 447 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 H2AFXP16104 143 aaPredicted RBP8.64□□□□□ -1.03
RSF1-201ENST00000308488 PDE6BP35913 854 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 UBE2Q1Q7Z7E8 422 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 NLRP7Q8WX94 980 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 HAUS4Q9H6D7 363 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 AOX1Q06278 1338 aa8.64□□□□□ -1.03
RSF1-201ENST00000308488 SUPT3HO75486 399 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 ARHGAP45Q92619 1136 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 CHMP2BQ9UQN3 213 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 IL9RQ01113 521 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 NLRP9Q7RTR0 991 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 INTS9Q9NV88 658 aaKnown RBP8.63□□□□□ -1.03
RSF1-201ENST00000308488 TMCO5AQ8N6Q1 288 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 ECT2Q9H8V3 914 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 TCEAL9Q9UHQ7 104 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 FHOD1Q9Y613 1164 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 PAX3P23760 479 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 TUBA1BP68363 451 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 TUBA1AQ71U36 451 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 CFAP36Q96G28 342 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 TMEM165Q9HC07 324 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 WDR37Q9Y2I8 494 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 BAZ2BQ9UIF8 2168 aaKnown RBP8.63□□□□□ -1.03
RSF1-201ENST00000308488 TUBA4AP68366 448 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 MTA1Q13330 715 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 NAA30Q147X3 362 aaPredicted RBP8.63□□□□□ -1.03
RSF1-201ENST00000308488 TMEM259Q4ZIN3 620 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 RSPH3Q86UC2 560 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 KRT7P08729 469 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 MYH9P35579 1960 aaKnown RBP8.63□□□□□ -1.03
RSF1-201ENST00000308488 FCHSD2O94868 740 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 MYBL2P10244 700 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 PANX2Q96RD6 677 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.63□□□□□ -1.031e-6■■□□□ 12.5
RSF1-201ENST00000308488 RAD21O60216 631 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 HNRNPCL1O60812 293 aaKnown RBP8.63□□□□□ -1.03
RSF1-201ENST00000308488 S100A1P23297 94 aa8.63□□□□□ -1.03
RSF1-201ENST00000308488 MRPL12P52815 198 aaKnown RBP8.63□□□□□ -1.03
RSF1-201ENST00000308488 STRN3Q13033 797 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms