RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 FANCCQ00597 558 aa25.8■■□□□ 1.72
MCF2L-201ENST00000261963 PPP2R5BQ15173 497 aa25.8■■□□□ 1.72
MCF2L-201ENST00000261963 PKN1Q16512 942 aa25.8■■□□□ 1.72
MCF2L-201ENST00000261963 CTR9Q6PD62 1173 aa25.8■■□□□ 1.72
MCF2L-201ENST00000261963 TMC6Q7Z403 805 aa25.8■■□□□ 1.72
MCF2L-201ENST00000261963 ELOA2Q8IYF1 753 aaPredicted RBP25.8■■□□□ 1.72
MCF2L-201ENST00000261963 NSUN4Q96CB9 384 aaKnown RBP25.8■■□□□ 1.72
MCF2L-201ENST00000261963 PSDA5PKW4 1024 aaPredicted RBP25.8■■□□□ 1.72
MCF2L-201ENST00000261963 ARMCX5Q6P1M9 558 aa25.8■■□□□ 1.72
MCF2L-201ENST00000261963 SRP68Q9UHB9 627 aaKnown RBP25.8■■□□□ 1.72
MCF2L-201ENST00000261963 ZRANB2O95218 330 aaKnown RBP eCLIP25.79■■□□□ 1.72
MCF2L-201ENST00000261963 BMP6P22004 513 aa25.79■■□□□ 1.72
MCF2L-201ENST00000261963 RPS8P62241 208 aaKnown RBP25.79■■□□□ 1.72
MCF2L-201ENST00000261963 EVX2Q03828 476 aa25.79■■□□□ 1.72
MCF2L-201ENST00000261963 TXLNBQ8N3L3 684 aa25.79■■□□□ 1.72
MCF2L-201ENST00000261963 BAZ2AQ9UIF9 1905 aaKnown RBP25.79■■□□□ 1.72
MCF2L-201ENST00000261963 SEMA3EO15041 775 aa25.79■■□□□ 1.72
MCF2L-201ENST00000261963 MYL5Q02045 173 aa25.79■■□□□ 1.72
MCF2L-201ENST00000261963 CABP5Q9NP86 173 aa25.78■■□□□ 1.72
MCF2L-201ENST00000261963 MYH2Q9UKX2 1941 aa25.78■■□□□ 1.72
MCF2L-201ENST00000261963 PLEKHA8P1O95397 391 aa25.78■■□□□ 1.72
MCF2L-201ENST00000261963 MECOMQ03112 1051 aa25.78■■□□□ 1.72
MCF2L-201ENST00000261963 IFIT1BQ5T764 474 aaKnown RBP25.78■■□□□ 1.72
MCF2L-201ENST00000261963 VPS54Q9P1Q0 977 aa25.78■■□□□ 1.72
MCF2L-201ENST00000261963 NARFQ9UHQ1 456 aa25.78■■□□□ 1.72
MCF2L-201ENST00000261963 FAM205CA6NFA0 338 aa25.77■■□□□ 1.72
MCF2L-201ENST00000261963 USP17L12C9JPN9 530 aa25.77■■□□□ 1.72
MCF2L-201ENST00000261963 USP17L21D6R901 530 aa25.77■■□□□ 1.72
MCF2L-201ENST00000261963 TROAPQ12815 778 aa25.77■■□□□ 1.72
MCF2L-201ENST00000261963 ZNF579Q8NAF0 562 aaKnown RBP25.77■■□□□ 1.72
MCF2L-201ENST00000261963 CCDC150Q8NCX0 1101 aa25.77■■□□□ 1.72
MCF2L-201ENST00000261963 UBXN4Q92575 508 aa25.77■■□□□ 1.72
MCF2L-201ENST00000261963 SRPRBQ9Y5M8 271 aaKnown RBP25.77■■□□□ 1.72
MCF2L-201ENST00000261963 hCG_1642624A0A1W2PR95 340 aa25.77■■□□□ 1.72
MCF2L-201ENST00000261963 PDE4BQ07343 736 aa25.77■■□□□ 1.72
MCF2L-201ENST00000261963 TFCP2L1Q9NZI6 479 aa25.77■■□□□ 1.72
MCF2L-201ENST00000261963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.77■■□□□ 1.72
MCF2L-201ENST00000261963 POLR3GO15318 223 aaPredicted RBP25.76■■□□□ 1.71
MCF2L-201ENST00000261963 CATIPQ7Z7H3 387 aa25.76■■□□□ 1.71
MCF2L-201ENST00000261963 DPF2Q92785 391 aa25.76■■□□□ 1.71
MCF2L-201ENST00000261963 PDS5AQ29RF7 1337 aaKnown RBP25.76■■□□□ 1.71
MCF2L-201ENST00000261963 POLR2DO15514 142 aaKnown RBP25.76■■□□□ 1.71
MCF2L-201ENST00000261963 PRPF3O43395 683 aaKnown RBP25.76■■□□□ 1.71
MCF2L-201ENST00000261963 PCP11498 1178 aaKnown RBP25.76■■□□□ 1.71
MCF2L-201ENST00000261963 ATP2B1P20020 1258 aa25.76■■□□□ 1.71
MCF2L-201ENST00000261963 KCNJ6P48051 423 aa25.76■■□□□ 1.71
MCF2L-201ENST00000261963 EARS2Q5JPH6 523 aaKnown RBP25.76■■□□□ 1.71
MCF2L-201ENST00000261963 CCDC24Q8N4L8 307 aa25.76■■□□□ 1.71
MCF2L-201ENST00000261963 NLRP3Q96P20 1036 aa25.76■■□□□ 1.71
MCF2L-201ENST00000261963 PHF20Q9BVI0 1012 aa25.76■■□□□ 1.71
MCF2L-201ENST00000261963 NYXQ9GZU5 481 aa25.76■■□□□ 1.71
MCF2L-201ENST00000261963 NRDCO43847 1150 aa25.75■■□□□ 1.71
MCF2L-201ENST00000261963 AKAP17AQ02040 695 aaKnown RBP25.75■■□□□ 1.71
MCF2L-201ENST00000261963 MUM1L1Q5H9M0 696 aa25.75■■□□□ 1.71
MCF2L-201ENST00000261963 IQCA1Q86XH1 822 aa25.75■■□□□ 1.71
MCF2L-201ENST00000261963 NEK11Q8NG66 645 aa25.75■■□□□ 1.71
MCF2L-201ENST00000261963 SERTAD1Q9UHV2 236 aa25.75■■□□□ 1.71
MCF2L-201ENST00000261963 RPS6KA4O75676 772 aa25.75■■□□□ 1.71
MCF2L-201ENST00000261963 PRR29P0C7W0 189 aa25.75■■□□□ 1.71
MCF2L-201ENST00000261963 HIBADHP31937 336 aaKnown RBP25.75■■□□□ 1.71
MCF2L-201ENST00000261963 POSTNQ15063 836 aa25.75■■□□□ 1.71
MCF2L-201ENST00000261963 OLFM4Q6UX06 510 aa25.75■■□□□ 1.71
MCF2L-201ENST00000261963 USP49Q70CQ1 688 aa25.75■■□□□ 1.71
MCF2L-201ENST00000261963 SETDB2Q96T68 719 aa25.75■■□□□ 1.71
MCF2L-201ENST00000261963 V9GY48 417 aaPredicted RBP25.75■■□□□ 1.71
MCF2L-201ENST00000261963 RC3H1Q5TC82 1133 aaKnown RBP25.74■■□□□ 1.71
MCF2L-201ENST00000261963 NBPF5PQ86XG9 351 aaPredicted RBP25.74■■□□□ 1.71
MCF2L-201ENST00000261963 DCP1AQ9NPI6 582 aaPredicted RBP25.74■■□□□ 1.71
MCF2L-201ENST00000261963 AATFQ9NY61 560 aaKnown RBP eCLIP25.74■■□□□ 1.71
MCF2L-201ENST00000261963 MAN1B1Q9UKM7 699 aa25.74■■□□□ 1.71
MCF2L-201ENST00000261963 PRDX5P30044 214 aa25.74■■□□□ 1.71
MCF2L-201ENST00000261963 NT5DC1Q5TFE4 455 aa25.74■■□□□ 1.71
MCF2L-201ENST00000261963 CSRNP2Q9H175 543 aa25.74■■□□□ 1.71
MCF2L-201ENST00000261963 RBM28Q9NW13 759 aaKnown RBP25.74■■□□□ 1.71
MCF2L-201ENST00000261963 CEP131Q9UPN4 1083 aa25.74■■□□□ 1.71
MCF2L-201ENST00000261963 ATP8B1O43520 1251 aa25.73■■□□□ 1.71
MCF2L-201ENST00000261963 SFPQP23246 707 aaKnown RBP eCLIP25.73■■□□□ 1.71
MCF2L-201ENST00000261963 DHX8Q14562 1220 aaKnown RBP25.73■■□□□ 1.71
MCF2L-201ENST00000261963 HOMER1Q86YM7 354 aa25.73■■□□□ 1.71
MCF2L-201ENST00000261963 FANCLQ9NW38 375 aa25.73■■□□□ 1.71
MCF2L-201ENST00000261963 MYH6P13533 1939 aa25.73■■□□□ 1.71
MCF2L-201ENST00000261963 ACTN4O43707 911 aaKnown RBP25.73■■□□□ 1.71
MCF2L-201ENST00000261963 ORC4O43929 436 aa25.73■■□□□ 1.71
MCF2L-201ENST00000261963 SARSP49591 514 aaKnown RBP25.73■■□□□ 1.71
MCF2L-201ENST00000261963 TMTC3Q6ZXV5 915 aa25.73■■□□□ 1.71
MCF2L-201ENST00000261963 ANKRD2Q9GZV1 360 aa25.73■■□□□ 1.71
MCF2L-201ENST00000261963 NMT2O60551 498 aa25.72■■□□□ 1.71
MCF2L-201ENST00000261963 DDAH1O94760 285 aa25.72■■□□□ 1.71
MCF2L-201ENST00000261963 XBP1P17861 261 aa25.72■■□□□ 1.71
MCF2L-201ENST00000261963 UBASH3AP57075 661 aa25.72■■□□□ 1.71
MCF2L-201ENST00000261963 NPY5RQ15761 445 aa25.72■■□□□ 1.71
MCF2L-201ENST00000261963 TXNRD3Q86VQ6 643 aa25.72■■□□□ 1.71
MCF2L-201ENST00000261963 AMIGO3Q86WK7 504 aa25.72■■□□□ 1.71
MCF2L-201ENST00000261963 GRAMD1CQ8IYS0 662 aa25.72■■□□□ 1.71
MCF2L-201ENST00000261963 HOOK1Q9UJC3 728 aaKnown RBP25.72■■□□□ 1.71
MCF2L-201ENST00000261963 KRT2P35908 639 aa25.72■■□□□ 1.71
MCF2L-201ENST00000261963 PIP4K2BP78356 416 aa25.72■■□□□ 1.71
MCF2L-201ENST00000261963 GPS2Q13227 327 aa25.72■■□□□ 1.71
MCF2L-201ENST00000261963 MNS1Q8NEH6 495 aa25.72■■□□□ 1.71
MCF2L-201ENST00000261963 COL24A1Q17RW2 1714 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms