RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Hspd1P63038 573 aaKnown RBP18.27■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Mrgprb1Q3UG61 350 aa18.27■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Pls1Q3V0K9 630 aa18.27■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Rc3h1Q4VGL6 1130 aaKnown RBP18.27■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Htatsf1Q8BGC0 757 aa18.27■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 GlmnQ8BZM1 596 aa18.27■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Serpinb13Q8CDC0 389 aa18.27■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 HlcsQ920N2 722 aa18.27■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Prkrip1Q9CWV6 186 aaKnown RBP18.27■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Znf638Q61464 1960 aaKnown RBP18.26■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Celf5D3Z4T1 395 aaKnown RBP18.26■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Zscan18E9PUD6 809 aa18.26■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Cntnap3E9PY62 1287 aa18.26■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Magea4F2Z493 315 aa18.26■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 MyocO70624 490 aa18.26■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Sfi1Q3UZY0 1216 aaKnown RBP18.26■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Glra4Q61603 456 aa18.26■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Swap70Q6A028 585 aaKnown RBP18.26■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Bco2Q99NF1 532 aa18.26■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Efcc1Q9JJF6 558 aa18.26■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 PfkpQ9WUA3 784 aaKnown RBP18.26■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Atp11aP98197 1187 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 YdjcQ14BV6 310 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Kiaa1211Q5PR69 1207 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Zbtb39Q6PDK0 712 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Entpd3Q8BFW6 529 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Nim1kQ8BHI9 436 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Gjc2Q8BQU6 440 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Fez1Q8K0X8 392 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Arhgef6Q8K4I3 771 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Plekha4Q8VC98 588 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Itgbl1Q8VDV0 494 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Ttll1Q91V51 423 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 BaatQ91X34 420 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Ivns1abpQ920Q8 642 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Htra3Q9D236 459 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Q9D2X8 372 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 DcpsQ9DAR7 338 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Spint1Q9R097 507 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Clip2Q9Z0H8 1047 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 FAM186AQ9D9R9 1790 aa18.25■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Traf1P39428 409 aa18.24■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Gm10392Q3V3I3 114 aa18.24■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Rgl2Q61193 778 aa18.24■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Zfp90Q61967 636 aa18.24■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Fam170aQ66LM6 333 aa18.24■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Tekt3Q6X6Z7 490 aa18.24■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Aoc2Q812C9 757 aa18.24■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Rnf41Q8BH75 317 aa18.24■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Eaf2Q91ZD6 262 aa18.24■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Skint3A7TZF0 458 aa18.23■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Cyp2c37P56654 490 aa18.23■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Cfap52Q5F201 620 aa18.23■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Cyp2c54Q6XVG2 490 aa18.23■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Tacc1Q6Y685 774 aa18.23■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Otop3Q80UF9 577 aa18.23■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Ubap2lQ80X50 1107 aaKnown RBP18.23■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Dpp9Q8BVG4 862 aa18.23■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Cyp2c50Q91X77 490 aa18.23■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Mtmr4Q91XS1 1190 aa18.23■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Dbr1Q923B1 550 aa18.23■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Clstn1Q9EPL2 979 aa18.23■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Ppfia1B2RXQ2 1266 aa18.22■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Tmigd3G3X8R9 209 aa18.22■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Rnf157Q3TEL6 685 aa18.22■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Prpf40bQ80W14 870 aa18.22■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Siglec10Q80ZE3 688 aa18.22■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Prune1Q8BIW1 454 aa18.22■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Bst2Q8R2Q8 172 aa18.22■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Pspc1Q8R326 523 aaKnown RBP18.22■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Rgs19Q9CX84 216 aa18.22■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Zmym2Q9CU65 1376 aa18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Gm8882E9Q7E4 283 aa18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Usp53P15975 1069 aa18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Q3TYL0 343 aa18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Hand2Q61039 217 aa18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Adgrg6Q6F3F9 1165 aa18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Filip1lQ6P6L0 1131 aa18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Recql4Q75NR7 1216 aaKnown RBP18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Adgra1Q8C4G9 578 aa18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 E4f1Q8CCE9 783 aa18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Rassf8Q8CJ96 419 aa18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Sapcd2Q9D818 391 aa18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Dock2Q8C3J5 1828 aa18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Tcof1O08784 1320 aaKnown RBP18.21■□□□□ 0.51
Hmgb1-208ENSMUST00000139443 Wdr63B2RY71 923 aa18.2■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 Gjd2O54851 321 aa18.2■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 Cd3dP04235 173 aa18.2■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 Lig1P37913 916 aa18.2■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 Ercc3P49135 783 aa18.2■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 Il6stQ00560 917 aa18.2■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 Stxbp3Q60770 592 aa18.2■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 ShbQ6PD21 503 aa18.2■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 Kif18aQ91WD7 886 aa18.2■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 Ppp1r9aH3BJD6 1292 aa18.19■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 Znf326O88291 580 aa18.19■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 Parp2O88554 559 aa18.19■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 Usp5P56399 858 aaKnown RBP18.19■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 Atp9bP98195 1146 aa18.19■□□□□ 0.5
Hmgb1-208ENSMUST00000139443 Tshz1Q5DTH5 1084 aa18.19■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms