RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 Gm10024A0A0A0MQA4 119 aa2.08□□□□□ -2.08
Pcdh9-202ENSMUST00000192221 Krtap22-2J3QNX6 67 aa2.07□□□□□ -2.08
Pcdh9-202ENSMUST00000192221 Kiaa1109A2AAE1 5005 aa2.07□□□□□ -2.08
Pcdh9-202ENSMUST00000192221 Lce1hQ9D6R3 140 aa2.06□□□□□ -2.08
Pcdh9-202ENSMUST00000192221 Lce3dE9Q8V1 98 aa2.06□□□□□ -2.08
Pcdh9-202ENSMUST00000192221 Gm11569B1AQB1 180 aa2.05□□□□□ -2.08
Pcdh9-202ENSMUST00000192221 Lce3aQ497I5 98 aa2.05□□□□□ -2.08
Pcdh9-202ENSMUST00000192221 Mt2P02798 61 aa2.04□□□□□ -2.08
Pcdh9-202ENSMUST00000192221 SspoQ8CG65 4998 aa2.04□□□□□ -2.08
Pcdh9-202ENSMUST00000192221 Lce1jD3YUU5 139 aa2.04□□□□□ -2.08
Pcdh9-202ENSMUST00000192221 Sprr2fO70557 76 aa2□□□□□ -2.09
Pcdh9-202ENSMUST00000192221 Sprr2iO70560 76 aa1.99□□□□□ -2.09
Pcdh9-202ENSMUST00000192221 Sprr2eO70556 76 aa1.99□□□□□ -2.09
Pcdh9-202ENSMUST00000192221 Krtap9-3Q3V2C1 136 aa1.99□□□□□ -2.09
Pcdh9-202ENSMUST00000192221 Gm11562A0PK51 136 aa1.98□□□□□ -2.09
Pcdh9-202ENSMUST00000192221 Gm39115A0A1B0GSH7 232 aa1.97□□□□□ -2.09
Pcdh9-202ENSMUST00000192221 Muc5bE9Q5I3 4800 aa1.96□□□□□ -2.1
Pcdh9-202ENSMUST00000192221 Lce1bQ9D149 137 aa1.96□□□□□ -2.1
Pcdh9-202ENSMUST00000192221 Lce1eQ9D139 143 aa1.94□□□□□ -2.1
Pcdh9-202ENSMUST00000192221 Gm2431E9Q8S1 172 aa1.92□□□□□ -2.1
Pcdh9-202ENSMUST00000192221 Krtap19-4Q925H7 84 aa1.9□□□□□ -2.11
Pcdh9-202ENSMUST00000192221 Sprr2dO70555 85 aa1.9□□□□□ -2.11
Pcdh9-202ENSMUST00000192221 Gm45337A0A1B0GS71 263 aa1.89□□□□□ -2.11
Pcdh9-202ENSMUST00000192221 Gm11554B1AQB2 190 aa1.89□□□□□ -2.11
Pcdh9-202ENSMUST00000192221 Lce1iQ9D6P5 149 aa1.88□□□□□ -2.11
Pcdh9-202ENSMUST00000192221 Gm29735A0A1B0GT06 219 aa1.87□□□□□ -2.11
Pcdh9-202ENSMUST00000192221 Gm11596B1AQB0 205 aa1.87□□□□□ -2.11
Pcdh9-202ENSMUST00000192221 Krtap4-6Q3V4B7 195 aa1.86□□□□□ -2.11
Pcdh9-202ENSMUST00000192221 Syne1Q6ZWR6 8799 aa1.84□□□□□ -2.12
Pcdh9-202ENSMUST00000192221 Krtap4-8B1AQA8 209 aa1.83□□□□□ -2.12
Pcdh9-202ENSMUST00000192221 Sprr2hO70559 108 aa1.83□□□□□ -2.12
Pcdh9-202ENSMUST00000192221 Lce1fB9EJP6 147 aa1.83□□□□□ -2.12
Pcdh9-202ENSMUST00000192221 Lce1cQ9D1C5 147 aa1.83□□□□□ -2.12
Pcdh9-202ENSMUST00000192221 Mt4P47945 62 aa1.82□□□□□ -2.12
Pcdh9-202ENSMUST00000192221 Gm11559Q9D3H7 191 aa1.8□□□□□ -2.12
Pcdh9-202ENSMUST00000192221 Gm11564A2A4L9 201 aa1.8□□□□□ -2.12
Pcdh9-202ENSMUST00000192221 Gm11595B1AQA7 289 aa1.8□□□□□ -2.12
Pcdh9-202ENSMUST00000192221 Krtap6-3A0A087WQL6 57 aa1.78□□□□□ -2.12
Pcdh9-202ENSMUST00000192221 Lce1a2Q9D1K4 149 aa1.76□□□□□ -2.13
Pcdh9-202ENSMUST00000192221 Gm11938Q9D3H4 131 aa1.73□□□□□ -2.13
Pcdh9-202ENSMUST00000192221 Lce1kJ3QP15 125 aa1.72□□□□□ -2.13
Pcdh9-202ENSMUST00000192221 Eppk1Q8R0W0 6548 aa1.72□□□□□ -2.13
Pcdh9-202ENSMUST00000192221 2300003K06RikA2A4M0 262 aa1.71□□□□□ -2.13
Pcdh9-202ENSMUST00000192221 Gm10153A0A1B0GRL1 320 aa1.7□□□□□ -2.14
Pcdh9-202ENSMUST00000192221 Syne2Q6ZWQ0 6874 aaKnown RBP1.67□□□□□ -2.14
Pcdh9-202ENSMUST00000192221 ObscnA2AAJ9 8891 aaKnown RBP1.67□□□□□ -2.14
Pcdh9-202ENSMUST00000192221 Krtap4-13Q9D7P3 165 aa1.66□□□□□ -2.14
Pcdh9-202ENSMUST00000192221 Sprr2bO70554 98 aa1.61□□□□□ -2.15
Pcdh9-202ENSMUST00000192221 Krtap5-2Q9D5Z7 189 aa1.61□□□□□ -2.15
Pcdh9-202ENSMUST00000192221 Mdn1A2ANY6 5589 aaKnown RBP1.61□□□□□ -2.15
Pcdh9-202ENSMUST00000192221 Krtap5-4Q62220 223 aa1.59□□□□□ -2.16
Pcdh9-202ENSMUST00000192221 Krtap20-2E9Q0A8 60 aa1.58□□□□□ -2.16
Pcdh9-202ENSMUST00000192221 Muc16A0A140LJ72 8478 aa1.58□□□□□ -2.16
Pcdh9-202ENSMUST00000192221 Mt1P02802 61 aaKnown RBP1.55□□□□□ -2.16
Pcdh9-202ENSMUST00000192221 Krtap4-16Q91W93 202 aa1.54□□□□□ -2.16
Pcdh9-202ENSMUST00000192221 Gpr98Q8VHN7 6298 aaKnown RBP1.54□□□□□ -2.16
Pcdh9-202ENSMUST00000192221 Gm4553A0A1B0GSA9 284 aa1.53□□□□□ -2.17
Pcdh9-202ENSMUST00000192221 Gm11567Q9D141 195 aa1.52□□□□□ -2.17
Pcdh9-202ENSMUST00000192221 Krtap5-1Q64507 230 aa1.47□□□□□ -2.17
Pcdh9-202ENSMUST00000192221 Fsip2A2ARZ3 6995 aa1.44□□□□□ -2.18
Pcdh9-202ENSMUST00000192221 Gm11568A2A4M2 211 aa1.42□□□□□ -2.18
Pcdh9-202ENSMUST00000192221 Krtap9-1Q64526 186 aa1.42□□□□□ -2.18
Pcdh9-202ENSMUST00000192221 Macf1Q9QXZ0 7354 aaKnown RBP1.36□□□□□ -2.19
Pcdh9-202ENSMUST00000192221 DstQ91ZU6 7393 aaKnown RBP1.31□□□□□ -2.2
Pcdh9-202ENSMUST00000192221 Gm11639A0A1D5RLM8 5808 aa1.31□□□□□ -2.2
Pcdh9-202ENSMUST00000192221 Gm4559A4IF42 199 aa1.27□□□□□ -2.21
Pcdh9-202ENSMUST00000192221 Krtap5-5Q2TA51 241 aa1.27□□□□□ -2.21
Pcdh9-202ENSMUST00000192221 Kmt2dQ6PDK2 5588 aa1.26□□□□□ -2.21
Pcdh9-202ENSMUST00000192221 Gm7579A0A1B0GRJ4 243 aa1.25□□□□□ -2.21
Pcdh9-202ENSMUST00000192221 1110025L11RikO09048 78 aa1.23□□□□□ -2.21
Pcdh9-202ENSMUST00000192221 Krtap6-5Q925H3 78 aa1.23□□□□□ -2.21
Pcdh9-202ENSMUST00000192221 NebE9Q1W3 7152 aa1.22□□□□□ -2.21
Pcdh9-202ENSMUST00000192221 Gm40460A0A1B0GR10 244 aa1.15□□□□□ -2.22
Pcdh9-202ENSMUST00000192221 Gm10229O08631 77 aa1.15□□□□□ -2.22
Pcdh9-202ENSMUST00000192221 Hmcn1D3YXG0 5634 aa1.11□□□□□ -2.23
Pcdh9-202ENSMUST00000192221 Phgr1Q8K0G7 91 aa1.11□□□□□ -2.23
Pcdh9-202ENSMUST00000192221 AhnakE9Q616 5656 aaKnown RBP1.02□□□□□ -2.25
Pcdh9-202ENSMUST00000192221 Muc19Q6PZE0 7524 aa1.01□□□□□ -2.25
Pcdh9-202ENSMUST00000192221 Krtap6-2O08884 159 aa0.94□□□□□ -2.26
Pcdh9-202ENSMUST00000192221 Krtap21-1Q925H4 128 aa0.89□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 7.4 ms