RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Krtap7-1Q9D3I6 87 aa5.37□□□□□ -1.55
Hmgb1-208ENSMUST00000139443 Syne1Q6ZWR6 8799 aa5.35□□□□□ -1.55
Hmgb1-208ENSMUST00000139443 Gm4553A0A1B0GSA9 284 aa5.35□□□□□ -1.55
Hmgb1-208ENSMUST00000139443 Gm11568A2A4M2 211 aa5.34□□□□□ -1.55
Hmgb1-208ENSMUST00000139443 Rps28P62858 69 aaKnown RBP5.34□□□□□ -1.55
Hmgb1-208ENSMUST00000139443 Krtap9-1Q64526 186 aa5.34□□□□□ -1.55
Hmgb1-208ENSMUST00000139443 Macf1Q9QXZ0 7354 aaKnown RBP5.34□□□□□ -1.56
Hmgb1-208ENSMUST00000139443 Kmt2dQ6PDK2 5588 aa5.31□□□□□ -1.56
Hmgb1-208ENSMUST00000139443 SmcpP15265 143 aa5.31□□□□□ -1.56
Hmgb1-208ENSMUST00000139443 Gm11639A0A1D5RLM8 5808 aa5.28□□□□□ -1.56
Hmgb1-208ENSMUST00000139443 Ndufs5Q99LY9 106 aa5.26□□□□□ -1.57
Hmgb1-208ENSMUST00000139443 A0A1Y7VJ07 166 aa5.25□□□□□ -1.57
Hmgb1-208ENSMUST00000139443 Lce1fB9EJP6 147 aa5.24□□□□□ -1.57
Hmgb1-208ENSMUST00000139443 Lce1cQ9D1C5 147 aa5.24□□□□□ -1.57
Hmgb1-208ENSMUST00000139443 Gm7544A0A1Y7VJ58 118 aa5.23□□□□□ -1.57
Hmgb1-208ENSMUST00000139443 Gm2431E9Q8S1 172 aa5.17□□□□□ -1.58
Hmgb1-208ENSMUST00000139443 Romo1P60603 79 aa5.17□□□□□ -1.58
Hmgb1-208ENSMUST00000139443 A030014E15RikA0A1Y7VJV2 120 aa5.13□□□□□ -1.59
Hmgb1-208ENSMUST00000139443 Gm45337A0A1B0GS71 263 aa5.1□□□□□ -1.59
Hmgb1-208ENSMUST00000139443 Sox16Q62247 57 aa5.09□□□□□ -1.59
Hmgb1-208ENSMUST00000139443 Krtap19-4Q925H7 84 aa5.05□□□□□ -1.6
Hmgb1-208ENSMUST00000139443 Muc19Q6PZE0 7524 aa5.05□□□□□ -1.6
Hmgb1-208ENSMUST00000139443 Gm11938Q9D3H4 131 aa5.04□□□□□ -1.6
Hmgb1-208ENSMUST00000139443 Gpr98Q8VHN7 6298 aaKnown RBP5.04□□□□□ -1.6
Hmgb1-208ENSMUST00000139443 Tnp1P10856 55 aa5.01□□□□□ -1.61
Hmgb1-208ENSMUST00000139443 4933415A04RikQ9D443 101 aa5.01□□□□□ -1.61
Hmgb1-208ENSMUST00000139443 Mt1P02802 61 aaKnown RBP4.98□□□□□ -1.61
Hmgb1-208ENSMUST00000139443 Gm10153A0A1B0GRL1 320 aa4.96□□□□□ -1.62
Hmgb1-208ENSMUST00000139443 Hmcn1D3YXG0 5634 aa4.94□□□□□ -1.62
Hmgb1-208ENSMUST00000139443 Gm40460A0A1B0GR10 244 aa4.92□□□□□ -1.62
Hmgb1-208ENSMUST00000139443 Gm7579A0A1B0GRJ4 243 aa4.92□□□□□ -1.62
Hmgb1-208ENSMUST00000139443 Krtap5-5Q2TA51 241 aa4.92□□□□□ -1.62
Hmgb1-208ENSMUST00000139443 Krtap5-4Q62220 223 aa4.92□□□□□ -1.62
Hmgb1-208ENSMUST00000139443 Gm39115A0A1B0GSH7 232 aa4.87□□□□□ -1.63
Hmgb1-208ENSMUST00000139443 Gm3646F6S692 53 aa4.87□□□□□ -1.63
Hmgb1-208ENSMUST00000139443 Lce3cQ91V05 98 aa4.87□□□□□ -1.63
Hmgb1-208ENSMUST00000139443 DstQ91ZU6 7393 aaKnown RBP4.83□□□□□ -1.64
Hmgb1-208ENSMUST00000139443 Krtap31-2Q8CAY5 177 aa4.8□□□□□ -1.64
Hmgb1-208ENSMUST00000139443 Lce3dE9Q8V1 98 aa4.79□□□□□ -1.64
Hmgb1-208ENSMUST00000139443 Gm40193A0A1B0GT39 78 aa4.76□□□□□ -1.65
Hmgb1-208ENSMUST00000139443 NebE9Q1W3 7152 aa4.69□□□□□ -1.66
Hmgb1-208ENSMUST00000139443 Sprr2fO70557 76 aa4.68□□□□□ -1.66
Hmgb1-208ENSMUST00000139443 Mt3P28184 68 aa4.66□□□□□ -1.66
Hmgb1-208ENSMUST00000139443 Krtap4-16Q91W93 202 aa4.66□□□□□ -1.66
Hmgb1-208ENSMUST00000139443 Lce3eF8VQJ0 98 aa4.63□□□□□ -1.67
Hmgb1-208ENSMUST00000139443 Lce3fQ6PAI4 98 aa4.63□□□□□ -1.67
Hmgb1-208ENSMUST00000139443 SvipQ3UZP4 77 aa4.62□□□□□ -1.67
Hmgb1-208ENSMUST00000139443 4933428G20RikQ9D3X4 101 aa4.57□□□□□ -1.68
Hmgb1-208ENSMUST00000139443 Gm45618A0A1B0GSA0 219 aa4.55□□□□□ -1.68
Hmgb1-208ENSMUST00000139443 ObscnA2AAJ9 8891 aaKnown RBP4.53□□□□□ -1.68
Hmgb1-208ENSMUST00000139443 AhnakE9Q616 5656 aaKnown RBP4.49□□□□□ -1.69
Hmgb1-208ENSMUST00000139443 A030003K21RikA0A1Y7VIM3 128 aa4.46□□□□□ -1.7
Hmgb1-208ENSMUST00000139443 Gm10337F7DEP7 55 aa4.45□□□□□ -1.7
Hmgb1-208ENSMUST00000139443 Lce3aQ497I5 98 aa4.44□□□□□ -1.7
Hmgb1-208ENSMUST00000139443 Gm10100J3QK64 120 aa4.39□□□□□ -1.71
Hmgb1-208ENSMUST00000139443 Krtap31-1Q9D644 177 aa4.35□□□□□ -1.71
Hmgb1-208ENSMUST00000139443 Sprr2dO70555 85 aa4.28□□□□□ -1.72
Hmgb1-208ENSMUST00000139443 Gm6217A0A1Y7VJK9 128 aa4.26□□□□□ -1.73
Hmgb1-208ENSMUST00000139443 Pcp4P63054 62 aa4.22□□□□□ -1.73
Hmgb1-208ENSMUST00000139443 Mp68P56379 58 aa4.16□□□□□ -1.74
Hmgb1-208ENSMUST00000139443 Sprr2eO70556 76 aa4.15□□□□□ -1.75
Hmgb1-208ENSMUST00000139443 Gm20538F6Z9R1 75 aa4.12□□□□□ -1.75
Hmgb1-208ENSMUST00000139443 A0A286YCP9 139 aa4.08□□□□□ -1.76
Hmgb1-208ENSMUST00000139443 Gm10024A0A0A0MQA4 119 aa3.97□□□□□ -1.77
Hmgb1-208ENSMUST00000139443 Gm10142J3KMP7 120 aa3.86□□□□□ -1.79
Hmgb1-208ENSMUST00000139443 Sprr2hO70559 108 aa3.77□□□□□ -1.81
Hmgb1-208ENSMUST00000139443 Muc16A0A140LJ72 8478 aa3.65□□□□□ -1.82
Hmgb1-208ENSMUST00000139443 Gm29735A0A1B0GT06 219 aa3.62□□□□□ -1.83
Hmgb1-208ENSMUST00000139443 1110025L11RikO09048 78 aa3.57□□□□□ -1.84
Hmgb1-208ENSMUST00000139443 Krtap6-5Q925H3 78 aa3.57□□□□□ -1.84
Hmgb1-208ENSMUST00000139443 Gm11567Q9D141 195 aa3.39□□□□□ -1.87
Hmgb1-208ENSMUST00000139443 Gm10229O08631 77 aa3.22□□□□□ -1.89
Hmgb1-208ENSMUST00000139443 Sprr2bO70554 98 aa2.95□□□□□ -1.94
Hmgb1-208ENSMUST00000139443 Krtap6-2O08884 159 aa2.88□□□□□ -1.95
Hmgb1-208ENSMUST00000139443 Krtap21-1Q925H4 128 aa2.85□□□□□ -1.95
Hmgb1-208ENSMUST00000139443 Krtap5-1Q64507 230 aa2.82□□□□□ -1.96
Hmgb1-208ENSMUST00000139443 Ndufaf8A2AMZ4 74 aa2.74□□□□□ -1.97
Hmgb1-208ENSMUST00000139443 Gm9112A2AI92 75 aa2.62□□□□□ -1.99
Hmgb1-208ENSMUST00000139443 Phgr1Q8K0G7 91 aa2.34□□□□□ -2.03
Hmgb1-208ENSMUST00000139443 Gm4559A4IF42 199 aa2.17□□□□□ -2.06
Retrieved 80 of 22,080 RNA–protein pairs in 80.2 ms