RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Krtap17-1A2A5X6 109 aa4.41□□□□□ -1.7
Shroom3-202ENSMUST00000113054 Birc6O88738 4882 aa4.39□□□□□ -1.71
Shroom3-202ENSMUST00000113054 Mdn1A2ANY6 5589 aaKnown RBP4.39□□□□□ -1.71
Shroom3-202ENSMUST00000113054 Sprr2hO70559 108 aa4.38□□□□□ -1.71
Shroom3-202ENSMUST00000113054 Lce1kJ3QP15 125 aa4.33□□□□□ -1.72
Shroom3-202ENSMUST00000113054 Gm11562A0PK51 136 aa4.31□□□□□ -1.72
Shroom3-202ENSMUST00000113054 Sprr2dO70555 85 aa4.28□□□□□ -1.72
Shroom3-202ENSMUST00000113054 Krtap31-1Q9D644 177 aa4.27□□□□□ -1.73
Shroom3-202ENSMUST00000113054 Fsip2A2ARZ3 6995 aa4.23□□□□□ -1.73
Shroom3-202ENSMUST00000113054 4932415D10RikA0A1W2P6U8 4986 aa4.19□□□□□ -1.74
Shroom3-202ENSMUST00000113054 Gm11938Q9D3H4 131 aa4.18□□□□□ -1.74
Shroom3-202ENSMUST00000113054 Syne1Q6ZWR6 8799 aa4.17□□□□□ -1.74
Shroom3-202ENSMUST00000113054 Ubr4A2AN08 5180 aa4.15□□□□□ -1.75
Shroom3-202ENSMUST00000113054 Syne2Q6ZWQ0 6874 aaKnown RBP4.14□□□□□ -1.75
Shroom3-202ENSMUST00000113054 Lce1a1Q9CQH5 143 aa4.13□□□□□ -1.75
Shroom3-202ENSMUST00000113054 Abca13Q5SSE9 5034 aa4.11□□□□□ -1.75
Shroom3-202ENSMUST00000113054 Mt3P28184 68 aa4.11□□□□□ -1.75
Shroom3-202ENSMUST00000113054 Fat4Q2PZL6 4981 aa4.09□□□□□ -1.75
Shroom3-202ENSMUST00000113054 Krtap4-16Q91W93 202 aa4.06□□□□□ -1.76
Shroom3-202ENSMUST00000113054 ZanO88799 5376 aa4.06□□□□□ -1.76
Shroom3-202ENSMUST00000113054 Hmcn2A2AJ76 5100 aa4.05□□□□□ -1.76
Shroom3-202ENSMUST00000113054 Muc5bE9Q5I3 4800 aa4.05□□□□□ -1.76
Shroom3-202ENSMUST00000113054 Gm11554B1AQB2 190 aa4.05□□□□□ -1.76
Shroom3-202ENSMUST00000113054 Sprr2bO70554 98 aa4.02□□□□□ -1.77
Shroom3-202ENSMUST00000113054 Krtap6-3A0A087WQL6 57 aa3.89□□□□□ -1.79
Shroom3-202ENSMUST00000113054 Rnf213E9Q555 5152 aaKnown RBP3.8□□□□□ -1.8
Shroom3-202ENSMUST00000113054 Krtap20-2E9Q0A8 60 aa3.74□□□□□ -1.81
Shroom3-202ENSMUST00000113054 Ush2AQ2QI47 5193 aa3.73□□□□□ -1.81
Shroom3-202ENSMUST00000113054 Mt1P02802 61 aaKnown RBP3.65□□□□□ -1.82
Shroom3-202ENSMUST00000113054 SspoQ8CG65 4998 aa3.59□□□□□ -1.83
Shroom3-202ENSMUST00000113054 Krtap31-2Q8CAY5 177 aa3.57□□□□□ -1.84
Shroom3-202ENSMUST00000113054 Muc16A0A140LJ72 8478 aa3.55□□□□□ -1.84
Shroom3-202ENSMUST00000113054 ObscnA2AAJ9 8891 aaKnown RBP3.34□□□□□ -1.87
Shroom3-202ENSMUST00000113054 NebE9Q1W3 7152 aa3.23□□□□□ -1.89
Shroom3-202ENSMUST00000113054 Macf1Q9QXZ0 7354 aaKnown RBP3.2□□□□□ -1.9
Shroom3-202ENSMUST00000113054 DstQ91ZU6 7393 aaKnown RBP3.18□□□□□ -1.9
Shroom3-202ENSMUST00000113054 Eppk1Q8R0W0 6548 aa3.14□□□□□ -1.91
Shroom3-202ENSMUST00000113054 Gm11555B1AQ89 175 aa3.1□□□□□ -1.91
Shroom3-202ENSMUST00000113054 1110025L11RikO09048 78 aa3□□□□□ -1.93
Shroom3-202ENSMUST00000113054 Krtap6-5Q925H3 78 aa3□□□□□ -1.93
Shroom3-202ENSMUST00000113054 Kmt2dQ6PDK2 5588 aa2.98□□□□□ -1.93
Shroom3-202ENSMUST00000113054 Muc19Q6PZE0 7524 aa2.97□□□□□ -1.93
Shroom3-202ENSMUST00000113054 Gm10229O08631 77 aa2.91□□□□□ -1.94
Shroom3-202ENSMUST00000113054 Gm11559Q9D3H7 191 aa2.86□□□□□ -1.95
Shroom3-202ENSMUST00000113054 Gm11568A2A4M2 211 aa2.79□□□□□ -1.96
Shroom3-202ENSMUST00000113054 Krtap9-1Q64526 186 aa2.79□□□□□ -1.96
Shroom3-202ENSMUST00000113054 Phgr1Q8K0G7 91 aa2.79□□□□□ -1.96
Shroom3-202ENSMUST00000113054 Gm11639A0A1D5RLM8 5808 aa2.34□□□□□ -2.03
Shroom3-202ENSMUST00000113054 Krtap6-2O08884 159 aa2.31□□□□□ -2.04
Shroom3-202ENSMUST00000113054 Gpr98Q8VHN7 6298 aaKnown RBP2.3□□□□□ -2.04
Shroom3-202ENSMUST00000113054 Krtap5-2Q9D5Z7 189 aa2.26□□□□□ -2.05
Shroom3-202ENSMUST00000113054 Hmcn1D3YXG0 5634 aa2.13□□□□□ -2.07
Shroom3-202ENSMUST00000113054 Gm4553A0A1B0GSA9 284 aa2.12□□□□□ -2.07
Shroom3-202ENSMUST00000113054 Gm2431E9Q8S1 172 aa2.09□□□□□ -2.08
Shroom3-202ENSMUST00000113054 Krtap21-1Q925H4 128 aa2.05□□□□□ -2.08
Shroom3-202ENSMUST00000113054 Gm11567Q9D141 195 aa2.05□□□□□ -2.08
Shroom3-202ENSMUST00000113054 Gm10153A0A1B0GRL1 320 aa1.93□□□□□ -2.1
Shroom3-202ENSMUST00000113054 A030005L19RikA0A1Y7VIU2 113 aa1.93□□□□□ -2.1
Shroom3-202ENSMUST00000113054 A0A1Y7VJH8 109 aa1.9□□□□□ -2.11
Shroom3-202ENSMUST00000113054 AhnakE9Q616 5656 aaKnown RBP1.88□□□□□ -2.11
Shroom3-202ENSMUST00000113054 Gm45337A0A1B0GS71 263 aa1.86□□□□□ -2.11
Shroom3-202ENSMUST00000113054 Gm40460A0A1B0GR10 244 aa1.8□□□□□ -2.12
Shroom3-202ENSMUST00000113054 Gm7579A0A1B0GRJ4 243 aa1.8□□□□□ -2.12
Shroom3-202ENSMUST00000113054 A0A1Y7VJ07 166 aa1.8□□□□□ -2.12
Shroom3-202ENSMUST00000113054 Krtap5-5Q2TA51 241 aa1.8□□□□□ -2.12
Shroom3-202ENSMUST00000113054 Krtap5-4Q62220 223 aa1.8□□□□□ -2.12
Shroom3-202ENSMUST00000113054 Gm39115A0A1B0GSH7 232 aa1.72□□□□□ -2.13
Shroom3-202ENSMUST00000113054 A0A1Y7VLE6 161 aa1.71□□□□□ -2.14
Shroom3-202ENSMUST00000113054 A0A286YCP9 139 aa1.66□□□□□ -2.14
Shroom3-202ENSMUST00000113054 Krtap28-10A0A1Y7VP58 119 aa1.59□□□□□ -2.15
Shroom3-202ENSMUST00000113054 A030003K21RikA0A1Y7VIM3 128 aa1.5□□□□□ -2.17
Shroom3-202ENSMUST00000113054 Gm45618A0A1B0GSA0 219 aa1.49□□□□□ -2.17
Shroom3-202ENSMUST00000113054 Krtap28-13A0A087WQP5 138 aa1.49□□□□□ -2.17
Shroom3-202ENSMUST00000113054 Gm7544A0A1Y7VJ58 118 aa1.47□□□□□ -2.17
Shroom3-202ENSMUST00000113054 A030005K14RikA0A1Y7VNY1 122 aa1.45□□□□□ -2.18
Shroom3-202ENSMUST00000113054 Gm6217A0A1Y7VJK9 128 aa1.39□□□□□ -2.19
Shroom3-202ENSMUST00000113054 A030014E15RikA0A1Y7VJV2 120 aa1.36□□□□□ -2.19
Shroom3-202ENSMUST00000113054 Gm29735A0A1B0GT06 219 aa1.33□□□□□ -2.2
Shroom3-202ENSMUST00000113054 Krtap5-1Q64507 230 aa1.29□□□□□ -2.2
Shroom3-202ENSMUST00000113054 Gm4559A4IF42 199 aa0.72□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 164.3 ms