RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Krtap4-7Q9D732 168 aa4.73□□□□□ -1.65
Trim71-201ENSMUST00000111816 Krtap4-2B1AQ85 167 aa4.73□□□□□ -1.65
Trim71-201ENSMUST00000111816 2300003K06RikA2A4M0 262 aa4.65□□□□□ -1.67
Trim71-201ENSMUST00000111816 Mdn1A2ANY6 5589 aaKnown RBP4.65□□□□□ -1.67
Trim71-201ENSMUST00000111816 Mt1P02802 61 aaKnown RBP4.63□□□□□ -1.67
Trim71-201ENSMUST00000111816 Herc1E9PZP8 4859 aa4.62□□□□□ -1.67
Trim71-201ENSMUST00000111816 Syne2Q6ZWQ0 6874 aaKnown RBP4.61□□□□□ -1.67
Trim71-201ENSMUST00000111816 ZanO88799 5376 aa4.61□□□□□ -1.67
Trim71-201ENSMUST00000111816 ObscnA2AAJ9 8891 aaKnown RBP4.48□□□□□ -1.69
Trim71-201ENSMUST00000111816 Ubr4A2AN08 5180 aa4.47□□□□□ -1.69
Trim71-201ENSMUST00000111816 Birc6O88738 4882 aa4.45□□□□□ -1.7
Trim71-201ENSMUST00000111816 Krtap4-1Q3UUY3 169 aa4.45□□□□□ -1.7
Trim71-201ENSMUST00000111816 Krtap4-9B1AQA9 244 aa4.41□□□□□ -1.7
Trim71-201ENSMUST00000111816 Gm11564A2A4L9 201 aa4.39□□□□□ -1.71
Trim71-201ENSMUST00000111816 Gm11563B1AQ90 168 aa4.39□□□□□ -1.71
Trim71-201ENSMUST00000111816 Gm11595B1AQA7 289 aa4.39□□□□□ -1.71
Trim71-201ENSMUST00000111816 Krtap4-8B1AQA8 209 aa4.39□□□□□ -1.71
Trim71-201ENSMUST00000111816 Gm11596B1AQB0 205 aa4.39□□□□□ -1.71
Trim71-201ENSMUST00000111816 Krtap4-13Q9D7P3 165 aa4.35□□□□□ -1.71
Trim71-201ENSMUST00000111816 Rnf213E9Q555 5152 aaKnown RBP4.28□□□□□ -1.72
Trim71-201ENSMUST00000111816 4932415D10RikA0A1W2P6U8 4986 aa4.28□□□□□ -1.72
Trim71-201ENSMUST00000111816 Muc5bE9Q5I3 4800 aa4.27□□□□□ -1.73
Trim71-201ENSMUST00000111816 Abca13Q5SSE9 5034 aa4.27□□□□□ -1.73
Trim71-201ENSMUST00000111816 Fat4Q2PZL6 4981 aa4.15□□□□□ -1.75
Trim71-201ENSMUST00000111816 Fsip2A2ARZ3 6995 aa4.13□□□□□ -1.75
Trim71-201ENSMUST00000111816 Gm11554B1AQB2 190 aa4.06□□□□□ -1.76
Trim71-201ENSMUST00000111816 Hmcn2A2AJ76 5100 aa4.04□□□□□ -1.76
Trim71-201ENSMUST00000111816 Krtap6-3A0A087WQL6 57 aa4.02□□□□□ -1.77
Trim71-201ENSMUST00000111816 Ush2AQ2QI47 5193 aa3.99□□□□□ -1.77
Trim71-201ENSMUST00000111816 Krtap17-1A2A5X6 109 aa3.87□□□□□ -1.79
Trim71-201ENSMUST00000111816 SspoQ8CG65 4998 aa3.76□□□□□ -1.81
Trim71-201ENSMUST00000111816 1110025L11RikO09048 78 aa3.73□□□□□ -1.81
Trim71-201ENSMUST00000111816 Krtap6-5Q925H3 78 aa3.73□□□□□ -1.81
Trim71-201ENSMUST00000111816 Muc16A0A140LJ72 8478 aa3.72□□□□□ -1.81
Trim71-201ENSMUST00000111816 Krtap20-2E9Q0A8 60 aa3.7□□□□□ -1.82
Trim71-201ENSMUST00000111816 Gm10229O08631 77 aa3.66□□□□□ -1.82
Trim71-201ENSMUST00000111816 Kmt2dQ6PDK2 5588 aa3.64□□□□□ -1.83
Trim71-201ENSMUST00000111816 Phgr1Q8K0G7 91 aa3.63□□□□□ -1.83
Trim71-201ENSMUST00000111816 Gm11567Q9D141 195 aa3.46□□□□□ -1.85
Trim71-201ENSMUST00000111816 Gm11568A2A4M2 211 aa3.38□□□□□ -1.87
Trim71-201ENSMUST00000111816 Krtap9-1Q64526 186 aa3.38□□□□□ -1.87
Trim71-201ENSMUST00000111816 Gm11559Q9D3H7 191 aa3.38□□□□□ -1.87
Trim71-201ENSMUST00000111816 Macf1Q9QXZ0 7354 aaKnown RBP3.33□□□□□ -1.88
Trim71-201ENSMUST00000111816 Gm11555B1AQ89 175 aa3.27□□□□□ -1.89
Trim71-201ENSMUST00000111816 Eppk1Q8R0W0 6548 aa3.22□□□□□ -1.89
Trim71-201ENSMUST00000111816 DstQ91ZU6 7393 aaKnown RBP3.13□□□□□ -1.91
Trim71-201ENSMUST00000111816 NebE9Q1W3 7152 aa3.11□□□□□ -1.91
Trim71-201ENSMUST00000111816 Muc19Q6PZE0 7524 aa3.06□□□□□ -1.92
Trim71-201ENSMUST00000111816 Gm11639A0A1D5RLM8 5808 aa3.03□□□□□ -1.92
Trim71-201ENSMUST00000111816 Krtap6-2O08884 159 aa2.81□□□□□ -1.96
Trim71-201ENSMUST00000111816 Hmcn1D3YXG0 5634 aa2.68□□□□□ -1.98
Trim71-201ENSMUST00000111816 Gpr98Q8VHN7 6298 aaKnown RBP2.68□□□□□ -1.98
Trim71-201ENSMUST00000111816 Krtap5-2Q9D5Z7 189 aa2.64□□□□□ -1.99
Trim71-201ENSMUST00000111816 Krtap21-1Q925H4 128 aa2.47□□□□□ -2.01
Trim71-201ENSMUST00000111816 AhnakE9Q616 5656 aaKnown RBP2.45□□□□□ -2.02
Trim71-201ENSMUST00000111816 Gm4553A0A1B0GSA9 284 aa2.43□□□□□ -2.02
Trim71-201ENSMUST00000111816 Gm10153A0A1B0GRL1 320 aa2.29□□□□□ -2.04
Trim71-201ENSMUST00000111816 Gm2431E9Q8S1 172 aa2.2□□□□□ -2.06
Trim71-201ENSMUST00000111816 A030005L19RikA0A1Y7VIU2 113 aa2.14□□□□□ -2.07
Trim71-201ENSMUST00000111816 Gm45337A0A1B0GS71 263 aa2.12□□□□□ -2.07
Trim71-201ENSMUST00000111816 Gm40460A0A1B0GR10 244 aa2.11□□□□□ -2.07
Trim71-201ENSMUST00000111816 Gm7579A0A1B0GRJ4 243 aa2.11□□□□□ -2.07
Trim71-201ENSMUST00000111816 Krtap5-5Q2TA51 241 aa2.11□□□□□ -2.07
Trim71-201ENSMUST00000111816 Krtap5-4Q62220 223 aa2.11□□□□□ -2.07
Trim71-201ENSMUST00000111816 A0A1Y7VJH8 109 aa2.09□□□□□ -2.08
Trim71-201ENSMUST00000111816 A0A1Y7VLE6 161 aa2.05□□□□□ -2.08
Trim71-201ENSMUST00000111816 Gm39115A0A1B0GSH7 232 aa1.98□□□□□ -2.09
Trim71-201ENSMUST00000111816 A030003K21RikA0A1Y7VIM3 128 aa1.91□□□□□ -2.1
Trim71-201ENSMUST00000111816 A0A286YCP9 139 aa1.86□□□□□ -2.11
Trim71-201ENSMUST00000111816 Krtap28-10A0A1Y7VP58 119 aa1.85□□□□□ -2.11
Trim71-201ENSMUST00000111816 Gm7544A0A1Y7VJ58 118 aa1.83□□□□□ -2.12
Trim71-201ENSMUST00000111816 Gm6217A0A1Y7VJK9 128 aa1.8□□□□□ -2.12
Trim71-201ENSMUST00000111816 A030005K14RikA0A1Y7VNY1 122 aa1.74□□□□□ -2.13
Trim71-201ENSMUST00000111816 Krtap28-13A0A087WQP5 138 aa1.69□□□□□ -2.14
Trim71-201ENSMUST00000111816 Gm29735A0A1B0GT06 219 aa1.67□□□□□ -2.14
Trim71-201ENSMUST00000111816 Gm45618A0A1B0GSA0 219 aa1.62□□□□□ -2.15
Trim71-201ENSMUST00000111816 A0A1Y7VJ07 166 aa1.56□□□□□ -2.16
Trim71-201ENSMUST00000111816 A030014E15RikA0A1Y7VJV2 120 aa1.31□□□□□ -2.2
Trim71-201ENSMUST00000111816 Krtap5-1Q64507 230 aa1.14□□□□□ -2.23
Trim71-201ENSMUST00000111816 Gm4559A4IF42 199 aa0.93□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 13.1 ms