RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Krtap4-7Q9D732 168 aa4.69□□□□□ -1.66
Shank1-201ENSMUST00000107934 Gm11562A0PK51 136 aa4.67□□□□□ -1.66
Shank1-201ENSMUST00000107934 4932415D10RikA0A1W2P6U8 4986 aa4.67□□□□□ -1.66
Shank1-201ENSMUST00000107934 Mdn1A2ANY6 5589 aaKnown RBP4.61□□□□□ -1.67
Shank1-201ENSMUST00000107934 Gm11938Q9D3H4 131 aa4.6□□□□□ -1.67
Shank1-201ENSMUST00000107934 Krtap4-13Q9D7P3 165 aa4.58□□□□□ -1.68
Shank1-201ENSMUST00000107934 Krtap31-1Q9D644 177 aa4.58□□□□□ -1.68
Shank1-201ENSMUST00000107934 Lce1kJ3QP15 125 aa4.56□□□□□ -1.68
Shank1-201ENSMUST00000107934 Sprr2hO70559 108 aa4.56□□□□□ -1.68
Shank1-201ENSMUST00000107934 Abca13Q5SSE9 5034 aa4.52□□□□□ -1.69
Shank1-201ENSMUST00000107934 ZanO88799 5376 aa4.52□□□□□ -1.69
Shank1-201ENSMUST00000107934 Sprr2dO70555 85 aa4.51□□□□□ -1.69
Shank1-201ENSMUST00000107934 Fat4Q2PZL6 4981 aa4.5□□□□□ -1.69
Shank1-201ENSMUST00000107934 Hmcn2A2AJ76 5100 aa4.5□□□□□ -1.69
Shank1-201ENSMUST00000107934 Muc5bE9Q5I3 4800 aa4.46□□□□□ -1.7
Shank1-201ENSMUST00000107934 Mt3P28184 68 aa4.45□□□□□ -1.7
Shank1-201ENSMUST00000107934 Ubr4A2AN08 5180 aa4.44□□□□□ -1.7
Shank1-201ENSMUST00000107934 Syne2Q6ZWQ0 6874 aaKnown RBP4.39□□□□□ -1.71
Shank1-201ENSMUST00000107934 Krtap31-2Q8CAY5 177 aa4.39□□□□□ -1.71
Shank1-201ENSMUST00000107934 Lce1a1Q9CQH5 143 aa4.38□□□□□ -1.71
Shank1-201ENSMUST00000107934 Krtap6-3A0A087WQL6 57 aa4.32□□□□□ -1.72
Shank1-201ENSMUST00000107934 Fsip2A2ARZ3 6995 aa4.31□□□□□ -1.72
Shank1-201ENSMUST00000107934 Syne1Q6ZWR6 8799 aa4.25□□□□□ -1.73
Shank1-201ENSMUST00000107934 Rnf213E9Q555 5152 aaKnown RBP4.24□□□□□ -1.73
Shank1-201ENSMUST00000107934 Krtap4-16Q91W93 202 aa4.2□□□□□ -1.74
Shank1-201ENSMUST00000107934 Gm11554B1AQB2 190 aa4.18□□□□□ -1.74
Shank1-201ENSMUST00000107934 Ush2AQ2QI47 5193 aa4.12□□□□□ -1.75
Shank1-201ENSMUST00000107934 Sprr2bO70554 98 aa4.07□□□□□ -1.76
Shank1-201ENSMUST00000107934 SspoQ8CG65 4998 aa4.04□□□□□ -1.76
Shank1-201ENSMUST00000107934 Mt1P02802 61 aaKnown RBP4.04□□□□□ -1.76
Shank1-201ENSMUST00000107934 Krtap20-2E9Q0A8 60 aa3.95□□□□□ -1.78
Shank1-201ENSMUST00000107934 Eppk1Q8R0W0 6548 aa3.79□□□□□ -1.8
Shank1-201ENSMUST00000107934 Gm11555B1AQ89 175 aa3.59□□□□□ -1.84
Shank1-201ENSMUST00000107934 ObscnA2AAJ9 8891 aaKnown RBP3.48□□□□□ -1.85
Shank1-201ENSMUST00000107934 Macf1Q9QXZ0 7354 aaKnown RBP3.48□□□□□ -1.85
Shank1-201ENSMUST00000107934 NebE9Q1W3 7152 aa3.48□□□□□ -1.85
Shank1-201ENSMUST00000107934 DstQ91ZU6 7393 aaKnown RBP3.36□□□□□ -1.87
Shank1-201ENSMUST00000107934 Muc16A0A140LJ72 8478 aa3.33□□□□□ -1.88
Shank1-201ENSMUST00000107934 1110025L11RikO09048 78 aa3.31□□□□□ -1.88
Shank1-201ENSMUST00000107934 Krtap6-5Q925H3 78 aa3.31□□□□□ -1.88
Shank1-201ENSMUST00000107934 Kmt2dQ6PDK2 5588 aa3.22□□□□□ -1.89
Shank1-201ENSMUST00000107934 Gm10229O08631 77 aa3.17□□□□□ -1.9
Shank1-201ENSMUST00000107934 Gm11559Q9D3H7 191 aa3.17□□□□□ -1.9
Shank1-201ENSMUST00000107934 Gm11568A2A4M2 211 aa3.12□□□□□ -1.91
Shank1-201ENSMUST00000107934 Krtap9-1Q64526 186 aa3.12□□□□□ -1.91
Shank1-201ENSMUST00000107934 Muc19Q6PZE0 7524 aa2.97□□□□□ -1.93
Shank1-201ENSMUST00000107934 Phgr1Q8K0G7 91 aa2.96□□□□□ -1.94
Shank1-201ENSMUST00000107934 Gpr98Q8VHN7 6298 aaKnown RBP2.9□□□□□ -1.95
Shank1-201ENSMUST00000107934 Gm11639A0A1D5RLM8 5808 aa2.76□□□□□ -1.97
Shank1-201ENSMUST00000107934 Krtap5-2Q9D5Z7 189 aa2.7□□□□□ -1.98
Shank1-201ENSMUST00000107934 Gm11567Q9D141 195 aa2.55□□□□□ -2
Shank1-201ENSMUST00000107934 Gm4553A0A1B0GSA9 284 aa2.53□□□□□ -2
Shank1-201ENSMUST00000107934 Krtap6-2O08884 159 aa2.52□□□□□ -2.01
Shank1-201ENSMUST00000107934 Hmcn1D3YXG0 5634 aa2.47□□□□□ -2.01
Shank1-201ENSMUST00000107934 A030005L19RikA0A1Y7VIU2 113 aa2.43□□□□□ -2.02
Shank1-201ENSMUST00000107934 Gm2431E9Q8S1 172 aa2.42□□□□□ -2.02
Shank1-201ENSMUST00000107934 Krtap21-1Q925H4 128 aa2.32□□□□□ -2.04
Shank1-201ENSMUST00000107934 Gm10153A0A1B0GRL1 320 aa2.27□□□□□ -2.05
Shank1-201ENSMUST00000107934 AhnakE9Q616 5656 aaKnown RBP2.23□□□□□ -2.05
Shank1-201ENSMUST00000107934 Gm45337A0A1B0GS71 263 aa2.15□□□□□ -2.07
Shank1-201ENSMUST00000107934 Gm40460A0A1B0GR10 244 aa2.11□□□□□ -2.07
Shank1-201ENSMUST00000107934 Gm7579A0A1B0GRJ4 243 aa2.11□□□□□ -2.07
Shank1-201ENSMUST00000107934 Krtap5-5Q2TA51 241 aa2.11□□□□□ -2.07
Shank1-201ENSMUST00000107934 Krtap5-4Q62220 223 aa2.11□□□□□ -2.07
Shank1-201ENSMUST00000107934 Gm39115A0A1B0GSH7 232 aa1.99□□□□□ -2.09
Shank1-201ENSMUST00000107934 A0A1Y7VJH8 109 aa1.87□□□□□ -2.11
Shank1-201ENSMUST00000107934 Gm45618A0A1B0GSA0 219 aa1.73□□□□□ -2.13
Shank1-201ENSMUST00000107934 Gm29735A0A1B0GT06 219 aa1.59□□□□□ -2.15
Shank1-201ENSMUST00000107934 Krtap5-1Q64507 230 aa1.47□□□□□ -2.17
Shank1-201ENSMUST00000107934 A0A1Y7VLE6 161 aa1.45□□□□□ -2.18
Shank1-201ENSMUST00000107934 A0A286YCP9 139 aa1.04□□□□□ -2.24
Shank1-201ENSMUST00000107934 A0A1Y7VJ07 166 aa1.02□□□□□ -2.25
Shank1-201ENSMUST00000107934 A030014E15RikA0A1Y7VJV2 120 aa0.94□□□□□ -2.26
Shank1-201ENSMUST00000107934 Gm4559A4IF42 199 aa0.87□□□□□ -2.27
Shank1-201ENSMUST00000107934 Krtap28-13A0A087WQP5 138 aa0.83□□□□□ -2.28
Shank1-201ENSMUST00000107934 A030003K21RikA0A1Y7VIM3 128 aa0.74□□□□□ -2.29
Shank1-201ENSMUST00000107934 Gm6217A0A1Y7VJK9 128 aa0.56□□□□□ -2.32
Shank1-201ENSMUST00000107934 Krtap28-10A0A1Y7VP58 119 aa0.48□□□□□ -2.33
Shank1-201ENSMUST00000107934 A030005K14RikA0A1Y7VNY1 122 aa0.46□□□□□ -2.34
Shank1-201ENSMUST00000107934 Gm7544A0A1Y7VJ58 118 aa-0.08□□□□□ -2.42
Retrieved 80 of 22,080 RNA–protein pairs in 10.4 ms