RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Pkhd1l1Q80ZA4 4249 aa4.59□□□□□ -1.68
Ccdc50-203ENSMUST00000100026 Gm11562A0PK51 136 aa4.55□□□□□ -1.68
Ccdc50-203ENSMUST00000100026 Birc6O88738 4882 aa4.55□□□□□ -1.68
Ccdc50-203ENSMUST00000100026 Lce1kJ3QP15 125 aa4.52□□□□□ -1.69
Ccdc50-203ENSMUST00000100026 Gm11938Q9D3H4 131 aa4.48□□□□□ -1.69
Ccdc50-203ENSMUST00000100026 Sprr2dO70555 85 aa4.44□□□□□ -1.7
Ccdc50-203ENSMUST00000100026 Mdn1A2ANY6 5589 aaKnown RBP4.42□□□□□ -1.7
Ccdc50-203ENSMUST00000100026 Mt3P28184 68 aa4.41□□□□□ -1.7
Ccdc50-203ENSMUST00000100026 Lce1a1Q9CQH5 143 aa4.39□□□□□ -1.71
Ccdc50-203ENSMUST00000100026 4932415D10RikA0A1W2P6U8 4986 aa4.39□□□□□ -1.71
Ccdc50-203ENSMUST00000100026 Krtap31-1Q9D644 177 aa4.36□□□□□ -1.71
Ccdc50-203ENSMUST00000100026 Krtap17-1A2A5X6 109 aa4.34□□□□□ -1.71
Ccdc50-203ENSMUST00000100026 Muc5bE9Q5I3 4800 aa4.3□□□□□ -1.72
Ccdc50-203ENSMUST00000100026 Krtap6-3A0A087WQL6 57 aa4.27□□□□□ -1.73
Ccdc50-203ENSMUST00000100026 ZanO88799 5376 aa4.23□□□□□ -1.73
Ccdc50-203ENSMUST00000100026 Sprr2bO70554 98 aa4.22□□□□□ -1.73
Ccdc50-203ENSMUST00000100026 Fat4Q2PZL6 4981 aa4.21□□□□□ -1.74
Ccdc50-203ENSMUST00000100026 Gm11554B1AQB2 190 aa4.21□□□□□ -1.74
Ccdc50-203ENSMUST00000100026 Syne2Q6ZWQ0 6874 aaKnown RBP4.21□□□□□ -1.74
Ccdc50-203ENSMUST00000100026 Ubr4A2AN08 5180 aa4.2□□□□□ -1.74
Ccdc50-203ENSMUST00000100026 Fsip2A2ARZ3 6995 aa4.18□□□□□ -1.74
Ccdc50-203ENSMUST00000100026 Hmcn2A2AJ76 5100 aa4.09□□□□□ -1.75
Ccdc50-203ENSMUST00000100026 Abca13Q5SSE9 5034 aa4.04□□□□□ -1.76
Ccdc50-203ENSMUST00000100026 Syne1Q6ZWR6 8799 aa4.02□□□□□ -1.77
Ccdc50-203ENSMUST00000100026 Krtap4-16Q91W93 202 aa4.01□□□□□ -1.77
Ccdc50-203ENSMUST00000100026 Krtap20-2E9Q0A8 60 aa3.92□□□□□ -1.78
Ccdc50-203ENSMUST00000100026 Rnf213E9Q555 5152 aaKnown RBP3.91□□□□□ -1.78
Ccdc50-203ENSMUST00000100026 Krtap31-2Q8CAY5 177 aa3.89□□□□□ -1.79
Ccdc50-203ENSMUST00000100026 Mt1P02802 61 aaKnown RBP3.86□□□□□ -1.79
Ccdc50-203ENSMUST00000100026 A0A1Y7VLE6 161 aa3.84□□□□□ -1.79
Ccdc50-203ENSMUST00000100026 Ush2AQ2QI47 5193 aa3.8□□□□□ -1.8
Ccdc50-203ENSMUST00000100026 SspoQ8CG65 4998 aa3.78□□□□□ -1.8
Ccdc50-203ENSMUST00000100026 Eppk1Q8R0W0 6548 aa3.52□□□□□ -1.85
Ccdc50-203ENSMUST00000100026 A030003K21RikA0A1Y7VIM3 128 aa3.51□□□□□ -1.85
Ccdc50-203ENSMUST00000100026 ObscnA2AAJ9 8891 aaKnown RBP3.41□□□□□ -1.86
Ccdc50-203ENSMUST00000100026 Gm11555B1AQ89 175 aa3.39□□□□□ -1.87
Ccdc50-203ENSMUST00000100026 Krtap28-10A0A1Y7VP58 119 aa3.33□□□□□ -1.88
Ccdc50-203ENSMUST00000100026 A0A1Y7VJH8 109 aa3.29□□□□□ -1.88
Ccdc50-203ENSMUST00000100026 Gm6217A0A1Y7VJK9 128 aa3.29□□□□□ -1.88
Ccdc50-203ENSMUST00000100026 DstQ91ZU6 7393 aaKnown RBP3.25□□□□□ -1.89
Ccdc50-203ENSMUST00000100026 Krtap28-13A0A087WQP5 138 aa3.23□□□□□ -1.89
Ccdc50-203ENSMUST00000100026 NebE9Q1W3 7152 aa3.22□□□□□ -1.89
Ccdc50-203ENSMUST00000100026 Muc16A0A140LJ72 8478 aa3.21□□□□□ -1.9
Ccdc50-203ENSMUST00000100026 A0A1Y7VJ07 166 aa3.21□□□□□ -1.9
Ccdc50-203ENSMUST00000100026 1110025L11RikO09048 78 aa3.2□□□□□ -1.9
Ccdc50-203ENSMUST00000100026 Krtap6-5Q925H3 78 aa3.2□□□□□ -1.9
Ccdc50-203ENSMUST00000100026 A030005K14RikA0A1Y7VNY1 122 aa3.16□□□□□ -1.9
Ccdc50-203ENSMUST00000100026 Macf1Q9QXZ0 7354 aaKnown RBP3.14□□□□□ -1.91
Ccdc50-203ENSMUST00000100026 Kmt2dQ6PDK2 5588 aa3.14□□□□□ -1.91
Ccdc50-203ENSMUST00000100026 Gm11559Q9D3H7 191 aa3.11□□□□□ -1.91
Ccdc50-203ENSMUST00000100026 Gm10229O08631 77 aa3.09□□□□□ -1.91
Ccdc50-203ENSMUST00000100026 A030005L19RikA0A1Y7VIU2 113 aa3.08□□□□□ -1.92
Ccdc50-203ENSMUST00000100026 Gm7544A0A1Y7VJ58 118 aa3.05□□□□□ -1.92
Ccdc50-203ENSMUST00000100026 A030014E15RikA0A1Y7VJV2 120 aa2.97□□□□□ -1.93
Ccdc50-203ENSMUST00000100026 Gm11568A2A4M2 211 aa2.94□□□□□ -1.94
Ccdc50-203ENSMUST00000100026 Krtap9-1Q64526 186 aa2.94□□□□□ -1.94
Ccdc50-203ENSMUST00000100026 Phgr1Q8K0G7 91 aa2.88□□□□□ -1.95
Ccdc50-203ENSMUST00000100026 Muc19Q6PZE0 7524 aa2.81□□□□□ -1.96
Ccdc50-203ENSMUST00000100026 Gm11639A0A1D5RLM8 5808 aa2.57□□□□□ -2
Ccdc50-203ENSMUST00000100026 Gpr98Q8VHN7 6298 aaKnown RBP2.53□□□□□ -2
Ccdc50-203ENSMUST00000100026 Krtap5-2Q9D5Z7 189 aa2.51□□□□□ -2.01
Ccdc50-203ENSMUST00000100026 Krtap6-2O08884 159 aa2.46□□□□□ -2.02
Ccdc50-203ENSMUST00000100026 Gm4553A0A1B0GSA9 284 aa2.39□□□□□ -2.03
Ccdc50-203ENSMUST00000100026 A0A286YCP9 139 aa2.38□□□□□ -2.03
Ccdc50-203ENSMUST00000100026 Gm2431E9Q8S1 172 aa2.27□□□□□ -2.05
Ccdc50-203ENSMUST00000100026 Hmcn1D3YXG0 5634 aa2.25□□□□□ -2.05
Ccdc50-203ENSMUST00000100026 Krtap21-1Q925H4 128 aa2.18□□□□□ -2.06
Ccdc50-203ENSMUST00000100026 AhnakE9Q616 5656 aaKnown RBP2.03□□□□□ -2.08
Ccdc50-203ENSMUST00000100026 Gm10153A0A1B0GRL1 320 aa2.02□□□□□ -2.09
Ccdc50-203ENSMUST00000100026 Gm11567Q9D141 195 aa2.01□□□□□ -2.09
Ccdc50-203ENSMUST00000100026 Gm45337A0A1B0GS71 263 aa1.95□□□□□ -2.1
Ccdc50-203ENSMUST00000100026 Gm40460A0A1B0GR10 244 aa1.91□□□□□ -2.1
Ccdc50-203ENSMUST00000100026 Gm7579A0A1B0GRJ4 243 aa1.91□□□□□ -2.1
Ccdc50-203ENSMUST00000100026 Krtap5-5Q2TA51 241 aa1.91□□□□□ -2.1
Ccdc50-203ENSMUST00000100026 Krtap5-4Q62220 223 aa1.91□□□□□ -2.1
Ccdc50-203ENSMUST00000100026 Gm39115A0A1B0GSH7 232 aa1.82□□□□□ -2.12
Ccdc50-203ENSMUST00000100026 Gm45618A0A1B0GSA0 219 aa1.52□□□□□ -2.17
Ccdc50-203ENSMUST00000100026 Gm29735A0A1B0GT06 219 aa1.42□□□□□ -2.18
Ccdc50-203ENSMUST00000100026 Krtap5-1Q64507 230 aa1.39□□□□□ -2.19
Ccdc50-203ENSMUST00000100026 Gm4559A4IF42 199 aa0.83□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 142.8 ms