RNA–Protein interactions for RNA: ENSMUST00000092415.8

Specc1-202, Transcript of Cytospin-B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Specc1, Length 6,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Specc1-202ENSMUST00000092415 Pkhd1l1Q80ZA4 4249 aa4.52□□□□□ -1.69
Specc1-202ENSMUST00000092415 Krtap4-7Q9D732 168 aa4.51□□□□□ -1.69
Specc1-202ENSMUST00000092415 Muc5bE9Q5I3 4800 aa4.5□□□□□ -1.69
Specc1-202ENSMUST00000092415 ZanO88799 5376 aa4.5□□□□□ -1.69
Specc1-202ENSMUST00000092415 Ubr4A2AN08 5180 aa4.48□□□□□ -1.69
Specc1-202ENSMUST00000092415 Krtap4-13Q9D7P3 165 aa4.46□□□□□ -1.7
Specc1-202ENSMUST00000092415 Abca13Q5SSE9 5034 aa4.46□□□□□ -1.7
Specc1-202ENSMUST00000092415 Lce1a2Q9D1K4 149 aa4.44□□□□□ -1.7
Specc1-202ENSMUST00000092415 Syne2Q6ZWQ0 6874 aaKnown RBP4.39□□□□□ -1.71
Specc1-202ENSMUST00000092415 Gm11562A0PK51 136 aa4.36□□□□□ -1.71
Specc1-202ENSMUST00000092415 Rnf213E9Q555 5152 aaKnown RBP4.36□□□□□ -1.71
Specc1-202ENSMUST00000092415 Krtap17-1A2A5X6 109 aa4.3□□□□□ -1.72
Specc1-202ENSMUST00000092415 Ush2AQ2QI47 5193 aa4.3□□□□□ -1.72
Specc1-202ENSMUST00000092415 Fsip2A2ARZ3 6995 aa4.28□□□□□ -1.72
Specc1-202ENSMUST00000092415 Lce1kJ3QP15 125 aa4.26□□□□□ -1.73
Specc1-202ENSMUST00000092415 Krtap6-3A0A087WQL6 57 aa4.24□□□□□ -1.73
Specc1-202ENSMUST00000092415 Lce1a1Q9CQH5 143 aa4.21□□□□□ -1.73
Specc1-202ENSMUST00000092415 Gm11938Q9D3H4 131 aa4.18□□□□□ -1.74
Specc1-202ENSMUST00000092415 Sprr2hO70559 108 aa4.15□□□□□ -1.74
Specc1-202ENSMUST00000092415 Mt3P28184 68 aa4.09□□□□□ -1.75
Specc1-202ENSMUST00000092415 Hmcn2A2AJ76 5100 aa4.05□□□□□ -1.76
Specc1-202ENSMUST00000092415 SspoQ8CG65 4998 aa4.03□□□□□ -1.76
Specc1-202ENSMUST00000092415 Syne1Q6ZWR6 8799 aa4□□□□□ -1.77
Specc1-202ENSMUST00000092415 Gm11554B1AQB2 190 aa4□□□□□ -1.77
Specc1-202ENSMUST00000092415 Sprr2dO70555 85 aa3.88□□□□□ -1.79
Specc1-202ENSMUST00000092415 Eppk1Q8R0W0 6548 aa3.86□□□□□ -1.79
Specc1-202ENSMUST00000092415 Krtap20-2E9Q0A8 60 aa3.82□□□□□ -1.8
Specc1-202ENSMUST00000092415 Krtap31-1Q9D644 177 aa3.81□□□□□ -1.8
Specc1-202ENSMUST00000092415 Sprr2bO70554 98 aa3.71□□□□□ -1.82
Specc1-202ENSMUST00000092415 Mt1P02802 61 aaKnown RBP3.67□□□□□ -1.82
Specc1-202ENSMUST00000092415 Gm11555B1AQ89 175 aa3.64□□□□□ -1.83
Specc1-202ENSMUST00000092415 Macf1Q9QXZ0 7354 aaKnown RBP3.53□□□□□ -1.84
Specc1-202ENSMUST00000092415 ObscnA2AAJ9 8891 aaKnown RBP3.47□□□□□ -1.85
Specc1-202ENSMUST00000092415 Krtap4-16Q91W93 202 aa3.43□□□□□ -1.86
Specc1-202ENSMUST00000092415 NebE9Q1W3 7152 aa3.43□□□□□ -1.86
Specc1-202ENSMUST00000092415 DstQ91ZU6 7393 aaKnown RBP3.43□□□□□ -1.86
Specc1-202ENSMUST00000092415 Kmt2dQ6PDK2 5588 aa3.42□□□□□ -1.86
Specc1-202ENSMUST00000092415 Muc16A0A140LJ72 8478 aa3.4□□□□□ -1.87
Specc1-202ENSMUST00000092415 Krtap31-2Q8CAY5 177 aa3.32□□□□□ -1.88
Specc1-202ENSMUST00000092415 Gm11559Q9D3H7 191 aa3.15□□□□□ -1.9
Specc1-202ENSMUST00000092415 Gpr98Q8VHN7 6298 aaKnown RBP3.08□□□□□ -1.92
Specc1-202ENSMUST00000092415 1110025L11RikO09048 78 aa3□□□□□ -1.93
Specc1-202ENSMUST00000092415 Krtap6-5Q925H3 78 aa3□□□□□ -1.93
Specc1-202ENSMUST00000092415 Gm11639A0A1D5RLM8 5808 aa2.99□□□□□ -1.93
Specc1-202ENSMUST00000092415 Gm11568A2A4M2 211 aa2.97□□□□□ -1.93
Specc1-202ENSMUST00000092415 Krtap9-1Q64526 186 aa2.97□□□□□ -1.93
Specc1-202ENSMUST00000092415 Muc19Q6PZE0 7524 aa2.94□□□□□ -1.94
Specc1-202ENSMUST00000092415 Gm10229O08631 77 aa2.86□□□□□ -1.95
Specc1-202ENSMUST00000092415 Krtap5-2Q9D5Z7 189 aa2.72□□□□□ -1.97
Specc1-202ENSMUST00000092415 Hmcn1D3YXG0 5634 aa2.7□□□□□ -1.98
Specc1-202ENSMUST00000092415 Gm4553A0A1B0GSA9 284 aa2.61□□□□□ -1.99
Specc1-202ENSMUST00000092415 Phgr1Q8K0G7 91 aa2.58□□□□□ -2
Specc1-202ENSMUST00000092415 A030005L19RikA0A1Y7VIU2 113 aa2.5□□□□□ -2.01
Specc1-202ENSMUST00000092415 Gm2431E9Q8S1 172 aa2.46□□□□□ -2.02
Specc1-202ENSMUST00000092415 AhnakE9Q616 5656 aaKnown RBP2.43□□□□□ -2.02
Specc1-202ENSMUST00000092415 Krtap6-2O08884 159 aa2.33□□□□□ -2.04
Specc1-202ENSMUST00000092415 Gm10153A0A1B0GRL1 320 aa2.23□□□□□ -2.05
Specc1-202ENSMUST00000092415 Gm45337A0A1B0GS71 263 aa2.21□□□□□ -2.06
Specc1-202ENSMUST00000092415 Gm40460A0A1B0GR10 244 aa2.18□□□□□ -2.06
Specc1-202ENSMUST00000092415 Gm7579A0A1B0GRJ4 243 aa2.18□□□□□ -2.06
Specc1-202ENSMUST00000092415 Krtap5-5Q2TA51 241 aa2.18□□□□□ -2.06
Specc1-202ENSMUST00000092415 Krtap5-4Q62220 223 aa2.18□□□□□ -2.06
Specc1-202ENSMUST00000092415 Krtap21-1Q925H4 128 aa2.09□□□□□ -2.07
Specc1-202ENSMUST00000092415 Gm39115A0A1B0GSH7 232 aa2.08□□□□□ -2.08
Specc1-202ENSMUST00000092415 A0A1Y7VJH8 109 aa2.04□□□□□ -2.08
Specc1-202ENSMUST00000092415 Gm11567Q9D141 195 aa1.92□□□□□ -2.1
Specc1-202ENSMUST00000092415 Gm45618A0A1B0GSA0 219 aa1.83□□□□□ -2.12
Specc1-202ENSMUST00000092415 Gm29735A0A1B0GT06 219 aa1.62□□□□□ -2.15
Specc1-202ENSMUST00000092415 A0A1Y7VLE6 161 aa1.59□□□□□ -2.16
Specc1-202ENSMUST00000092415 Krtap5-1Q64507 230 aa1.44□□□□□ -2.18
Specc1-202ENSMUST00000092415 A0A286YCP9 139 aa1.24□□□□□ -2.21
Specc1-202ENSMUST00000092415 A030003K21RikA0A1Y7VIM3 128 aa1.15□□□□□ -2.23
Specc1-202ENSMUST00000092415 Krtap28-10A0A1Y7VP58 119 aa1.12□□□□□ -2.23
Specc1-202ENSMUST00000092415 Gm6217A0A1Y7VJK9 128 aa1.09□□□□□ -2.24
Specc1-202ENSMUST00000092415 A030005K14RikA0A1Y7VNY1 122 aa1.08□□□□□ -2.24
Specc1-202ENSMUST00000092415 A0A1Y7VJ07 166 aa1.05□□□□□ -2.24
Specc1-202ENSMUST00000092415 Krtap28-13A0A087WQP5 138 aa1.04□□□□□ -2.24
Specc1-202ENSMUST00000092415 A030014E15RikA0A1Y7VJV2 120 aa0.98□□□□□ -2.25
Specc1-202ENSMUST00000092415 Gm7544A0A1Y7VJ58 118 aa0.97□□□□□ -2.25
Specc1-202ENSMUST00000092415 Gm4559A4IF42 199 aa0.89□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 132.6 ms