RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Gm11595B1AQA7 289 aa3.81□□□□□ -1.8
Ccdc88c-201ENSMUST00000068411 Krtap4-8B1AQA8 209 aa3.81□□□□□ -1.8
Ccdc88c-201ENSMUST00000068411 Krtap31-1Q9D644 177 aa3.8□□□□□ -1.8
Ccdc88c-201ENSMUST00000068411 Krtap4-13Q9D7P3 165 aa3.78□□□□□ -1.8
Ccdc88c-201ENSMUST00000068411 Krtap17-1A2A5X6 109 aa3.75□□□□□ -1.81
Ccdc88c-201ENSMUST00000068411 Birc6O88738 4882 aa3.75□□□□□ -1.81
Ccdc88c-201ENSMUST00000068411 Herc1E9PZP8 4859 aa3.7□□□□□ -1.82
Ccdc88c-201ENSMUST00000068411 Lce1a1Q9CQH5 143 aa3.69□□□□□ -1.82
Ccdc88c-201ENSMUST00000068411 Lce1kJ3QP15 125 aa3.69□□□□□ -1.82
Ccdc88c-201ENSMUST00000068411 Sprr2bO70554 98 aa3.68□□□□□ -1.82
Ccdc88c-201ENSMUST00000068411 Gm11562A0PK51 136 aa3.68□□□□□ -1.82
Ccdc88c-201ENSMUST00000068411 Fsip2A2ARZ3 6995 aa3.64□□□□□ -1.83
Ccdc88c-201ENSMUST00000068411 Krtap4-16Q91W93 202 aa3.63□□□□□ -1.83
Ccdc88c-201ENSMUST00000068411 Ubr4A2AN08 5180 aa3.62□□□□□ -1.83
Ccdc88c-201ENSMUST00000068411 Syne2Q6ZWQ0 6874 aaKnown RBP3.57□□□□□ -1.84
Ccdc88c-201ENSMUST00000068411 Abca13Q5SSE9 5034 aa3.56□□□□□ -1.84
Ccdc88c-201ENSMUST00000068411 Gm11938Q9D3H4 131 aa3.55□□□□□ -1.84
Ccdc88c-201ENSMUST00000068411 Hmcn2A2AJ76 5100 aa3.54□□□□□ -1.84
Ccdc88c-201ENSMUST00000068411 Gm11554B1AQB2 190 aa3.53□□□□□ -1.84
Ccdc88c-201ENSMUST00000068411 Mt3P28184 68 aa3.47□□□□□ -1.85
Ccdc88c-201ENSMUST00000068411 Krtap31-2Q8CAY5 177 aa3.46□□□□□ -1.86
Ccdc88c-201ENSMUST00000068411 ZanO88799 5376 aa3.46□□□□□ -1.86
Ccdc88c-201ENSMUST00000068411 Fat4Q2PZL6 4981 aa3.45□□□□□ -1.86
Ccdc88c-201ENSMUST00000068411 4932415D10RikA0A1W2P6U8 4986 aa3.43□□□□□ -1.86
Ccdc88c-201ENSMUST00000068411 Muc5bE9Q5I3 4800 aa3.36□□□□□ -1.87
Ccdc88c-201ENSMUST00000068411 Muc16A0A140LJ72 8478 aa3.33□□□□□ -1.88
Ccdc88c-201ENSMUST00000068411 Krtap6-3A0A087WQL6 57 aa3.23□□□□□ -1.89
Ccdc88c-201ENSMUST00000068411 Rnf213E9Q555 5152 aaKnown RBP3.22□□□□□ -1.89
Ccdc88c-201ENSMUST00000068411 Ush2AQ2QI47 5193 aa3.14□□□□□ -1.91
Ccdc88c-201ENSMUST00000068411 Krtap20-2E9Q0A8 60 aa3.13□□□□□ -1.91
Ccdc88c-201ENSMUST00000068411 Mt1P02802 61 aaKnown RBP3.1□□□□□ -1.91
Ccdc88c-201ENSMUST00000068411 ObscnA2AAJ9 8891 aaKnown RBP3.04□□□□□ -1.92
Ccdc88c-201ENSMUST00000068411 SspoQ8CG65 4998 aa3.01□□□□□ -1.93
Ccdc88c-201ENSMUST00000068411 NebE9Q1W3 7152 aa2.89□□□□□ -1.95
Ccdc88c-201ENSMUST00000068411 Macf1Q9QXZ0 7354 aaKnown RBP2.88□□□□□ -1.95
Ccdc88c-201ENSMUST00000068411 Gm11555B1AQ89 175 aa2.75□□□□□ -1.97
Ccdc88c-201ENSMUST00000068411 Muc19Q6PZE0 7524 aa2.74□□□□□ -1.97
Ccdc88c-201ENSMUST00000068411 DstQ91ZU6 7393 aaKnown RBP2.73□□□□□ -1.97
Ccdc88c-201ENSMUST00000068411 1110025L11RikO09048 78 aa2.58□□□□□ -2
Ccdc88c-201ENSMUST00000068411 Krtap6-5Q925H3 78 aa2.58□□□□□ -2
Ccdc88c-201ENSMUST00000068411 Eppk1Q8R0W0 6548 aa2.57□□□□□ -2
Ccdc88c-201ENSMUST00000068411 Kmt2dQ6PDK2 5588 aa2.54□□□□□ -2
Ccdc88c-201ENSMUST00000068411 Gm10229O08631 77 aa2.48□□□□□ -2.01
Ccdc88c-201ENSMUST00000068411 Phgr1Q8K0G7 91 aa2.46□□□□□ -2.02
Ccdc88c-201ENSMUST00000068411 Gm11568A2A4M2 211 aa2.34□□□□□ -2.03
Ccdc88c-201ENSMUST00000068411 Krtap9-1Q64526 186 aa2.34□□□□□ -2.03
Ccdc88c-201ENSMUST00000068411 Gm11559Q9D3H7 191 aa2.32□□□□□ -2.04
Ccdc88c-201ENSMUST00000068411 Krtap6-2O08884 159 aa1.97□□□□□ -2.09
Ccdc88c-201ENSMUST00000068411 Gpr98Q8VHN7 6298 aaKnown RBP1.94□□□□□ -2.1
Ccdc88c-201ENSMUST00000068411 Gm11639A0A1D5RLM8 5808 aa1.93□□□□□ -2.1
Ccdc88c-201ENSMUST00000068411 Gm11567Q9D141 195 aa1.89□□□□□ -2.11
Ccdc88c-201ENSMUST00000068411 Krtap5-2Q9D5Z7 189 aa1.88□□□□□ -2.11
Ccdc88c-201ENSMUST00000068411 Hmcn1D3YXG0 5634 aa1.85□□□□□ -2.11
Ccdc88c-201ENSMUST00000068411 Krtap21-1Q925H4 128 aa1.79□□□□□ -2.12
Ccdc88c-201ENSMUST00000068411 Gm4553A0A1B0GSA9 284 aa1.75□□□□□ -2.13
Ccdc88c-201ENSMUST00000068411 Gm2431E9Q8S1 172 aa1.7□□□□□ -2.14
Ccdc88c-201ENSMUST00000068411 A030005L19RikA0A1Y7VIU2 113 aa1.65□□□□□ -2.15
Ccdc88c-201ENSMUST00000068411 Gm10153A0A1B0GRL1 320 aa1.57□□□□□ -2.16
Ccdc88c-201ENSMUST00000068411 A0A1Y7VJH8 109 aa1.55□□□□□ -2.16
Ccdc88c-201ENSMUST00000068411 AhnakE9Q616 5656 aaKnown RBP1.55□□□□□ -2.16
Ccdc88c-201ENSMUST00000068411 Gm45337A0A1B0GS71 263 aa1.41□□□□□ -2.18
Ccdc88c-201ENSMUST00000068411 Gm40460A0A1B0GR10 244 aa1.37□□□□□ -2.19
Ccdc88c-201ENSMUST00000068411 Gm7579A0A1B0GRJ4 243 aa1.37□□□□□ -2.19
Ccdc88c-201ENSMUST00000068411 Krtap5-5Q2TA51 241 aa1.37□□□□□ -2.19
Ccdc88c-201ENSMUST00000068411 Krtap5-4Q62220 223 aa1.37□□□□□ -2.19
Ccdc88c-201ENSMUST00000068411 A0A1Y7VLE6 161 aa1.33□□□□□ -2.2
Ccdc88c-201ENSMUST00000068411 Gm39115A0A1B0GSH7 232 aa1.3□□□□□ -2.2
Ccdc88c-201ENSMUST00000068411 A0A1Y7VJ07 166 aa1.22□□□□□ -2.21
Ccdc88c-201ENSMUST00000068411 Gm45618A0A1B0GSA0 219 aa1.15□□□□□ -2.23
Ccdc88c-201ENSMUST00000068411 A0A286YCP9 139 aa1.09□□□□□ -2.24
Ccdc88c-201ENSMUST00000068411 Krtap28-10A0A1Y7VP58 119 aa1.08□□□□□ -2.24
Ccdc88c-201ENSMUST00000068411 A030005K14RikA0A1Y7VNY1 122 aa1.05□□□□□ -2.24
Ccdc88c-201ENSMUST00000068411 Krtap28-13A0A087WQP5 138 aa1.05□□□□□ -2.24
Ccdc88c-201ENSMUST00000068411 Gm7544A0A1Y7VJ58 118 aa1.04□□□□□ -2.24
Ccdc88c-201ENSMUST00000068411 Krtap5-1Q64507 230 aa1.04□□□□□ -2.24
Ccdc88c-201ENSMUST00000068411 Gm29735A0A1B0GT06 219 aa1.01□□□□□ -2.25
Ccdc88c-201ENSMUST00000068411 A030003K21RikA0A1Y7VIM3 128 aa0.96□□□□□ -2.26
Ccdc88c-201ENSMUST00000068411 Gm6217A0A1Y7VJK9 128 aa0.96□□□□□ -2.26
Ccdc88c-201ENSMUST00000068411 A030014E15RikA0A1Y7VJV2 120 aa0.83□□□□□ -2.28
Ccdc88c-201ENSMUST00000068411 Gm4559A4IF42 199 aa0.56□□□□□ -2.32
Retrieved 80 of 22,080 RNA–protein pairs in 6.5 ms