RNA–Protein interactions for RNA: ENSMUST00000067512.7

Smpd3-201, Transcript of Sphingomyelin phosphodiesterase 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smpd3, Length 5,148 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd3-201ENSMUST00000067512 Krtap4-8B1AQA8 209 aa4.08□□□□□ -1.76
Smpd3-201ENSMUST00000067512 Gm11562A0PK51 136 aa4.08□□□□□ -1.76
Smpd3-201ENSMUST00000067512 Ubr4A2AN08 5180 aa4.07□□□□□ -1.76
Smpd3-201ENSMUST00000067512 Lce1iQ9D6P5 149 aa4.03□□□□□ -1.76
Smpd3-201ENSMUST00000067512 Lce1hQ9D6R3 140 aa4.03□□□□□ -1.76
Smpd3-201ENSMUST00000067512 Rnf213E9Q555 5152 aaKnown RBP4.03□□□□□ -1.76
Smpd3-201ENSMUST00000067512 Krtap17-1A2A5X6 109 aa4.02□□□□□ -1.77
Smpd3-201ENSMUST00000067512 Krtap4-9B1AQA9 244 aa4.02□□□□□ -1.77
Smpd3-201ENSMUST00000067512 Syne2Q6ZWQ0 6874 aaKnown RBP4.01□□□□□ -1.77
Smpd3-201ENSMUST00000067512 Sprr2eO70556 76 aa3.98□□□□□ -1.77
Smpd3-201ENSMUST00000067512 Krtap28-10A0A1Y7VP58 119 aa3.96□□□□□ -1.78
Smpd3-201ENSMUST00000067512 Lce1eQ9D139 143 aa3.96□□□□□ -1.78
Smpd3-201ENSMUST00000067512 2300003K06RikA2A4M0 262 aa3.94□□□□□ -1.78
Smpd3-201ENSMUST00000067512 Lce1a2Q9D1K4 149 aa3.93□□□□□ -1.78
Smpd3-201ENSMUST00000067512 Krtap4-7Q9D732 168 aa3.91□□□□□ -1.78
Smpd3-201ENSMUST00000067512 Krtap4-13Q9D7P3 165 aa3.89□□□□□ -1.79
Smpd3-201ENSMUST00000067512 Sprr2hO70559 108 aa3.85□□□□□ -1.79
Smpd3-201ENSMUST00000067512 Fsip2A2ARZ3 6995 aa3.82□□□□□ -1.8
Smpd3-201ENSMUST00000067512 Hmcn2A2AJ76 5100 aa3.82□□□□□ -1.8
Smpd3-201ENSMUST00000067512 Krtap6-3A0A087WQL6 57 aa3.79□□□□□ -1.8
Smpd3-201ENSMUST00000067512 Sprr2dO70555 85 aa3.79□□□□□ -1.8
Smpd3-201ENSMUST00000067512 Krtap28-13A0A087WQP5 138 aa3.76□□□□□ -1.81
Smpd3-201ENSMUST00000067512 SspoQ8CG65 4998 aa3.75□□□□□ -1.81
Smpd3-201ENSMUST00000067512 A030003K21RikA0A1Y7VIM3 128 aa3.72□□□□□ -1.81
Smpd3-201ENSMUST00000067512 Syne1Q6ZWR6 8799 aa3.71□□□□□ -1.81
Smpd3-201ENSMUST00000067512 A030005L19RikA0A1Y7VIU2 113 aa3.7□□□□□ -1.82
Smpd3-201ENSMUST00000067512 Gm7544A0A1Y7VJ58 118 aa3.69□□□□□ -1.82
Smpd3-201ENSMUST00000067512 Lce1kJ3QP15 125 aa3.67□□□□□ -1.82
Smpd3-201ENSMUST00000067512 Lce1a1Q9CQH5 143 aa3.67□□□□□ -1.82
Smpd3-201ENSMUST00000067512 Krtap31-1Q9D644 177 aa3.66□□□□□ -1.82
Smpd3-201ENSMUST00000067512 A030005K14RikA0A1Y7VNY1 122 aa3.65□□□□□ -1.82
Smpd3-201ENSMUST00000067512 Gm11938Q9D3H4 131 aa3.61□□□□□ -1.83
Smpd3-201ENSMUST00000067512 Eppk1Q8R0W0 6548 aa3.51□□□□□ -1.85
Smpd3-201ENSMUST00000067512 Mt3P28184 68 aa3.5□□□□□ -1.85
Smpd3-201ENSMUST00000067512 Gm6217A0A1Y7VJK9 128 aa3.49□□□□□ -1.85
Smpd3-201ENSMUST00000067512 Gm11555B1AQ89 175 aa3.47□□□□□ -1.85
Smpd3-201ENSMUST00000067512 A0A1Y7VJ07 166 aa3.45□□□□□ -1.86
Smpd3-201ENSMUST00000067512 Krtap31-2Q8CAY5 177 aa3.45□□□□□ -1.86
Smpd3-201ENSMUST00000067512 Gm11554B1AQB2 190 aa3.43□□□□□ -1.86
Smpd3-201ENSMUST00000067512 Krtap20-2E9Q0A8 60 aa3.37□□□□□ -1.87
Smpd3-201ENSMUST00000067512 Mt1P02802 61 aaKnown RBP3.32□□□□□ -1.88
Smpd3-201ENSMUST00000067512 Krtap4-16Q91W93 202 aa3.26□□□□□ -1.89
Smpd3-201ENSMUST00000067512 Sprr2bO70554 98 aa3.21□□□□□ -1.89
Smpd3-201ENSMUST00000067512 Muc16A0A140LJ72 8478 aa3.2□□□□□ -1.9
Smpd3-201ENSMUST00000067512 A030014E15RikA0A1Y7VJV2 120 aa3.18□□□□□ -1.9
Smpd3-201ENSMUST00000067512 Macf1Q9QXZ0 7354 aaKnown RBP3.13□□□□□ -1.91
Smpd3-201ENSMUST00000067512 DstQ91ZU6 7393 aaKnown RBP3.04□□□□□ -1.92
Smpd3-201ENSMUST00000067512 ObscnA2AAJ9 8891 aaKnown RBP3.03□□□□□ -1.93
Smpd3-201ENSMUST00000067512 NebE9Q1W3 7152 aa2.99□□□□□ -1.93
Smpd3-201ENSMUST00000067512 Kmt2dQ6PDK2 5588 aa2.97□□□□□ -1.93
Smpd3-201ENSMUST00000067512 Gm11559Q9D3H7 191 aa2.9□□□□□ -1.95
Smpd3-201ENSMUST00000067512 Gpr98Q8VHN7 6298 aaKnown RBP2.78□□□□□ -1.96
Smpd3-201ENSMUST00000067512 A0A286YCP9 139 aa2.75□□□□□ -1.97
Smpd3-201ENSMUST00000067512 Gm11568A2A4M2 211 aa2.74□□□□□ -1.97
Smpd3-201ENSMUST00000067512 Krtap9-1Q64526 186 aa2.74□□□□□ -1.97
Smpd3-201ENSMUST00000067512 Gm11639A0A1D5RLM8 5808 aa2.73□□□□□ -1.97
Smpd3-201ENSMUST00000067512 Krtap5-2Q9D5Z7 189 aa2.65□□□□□ -1.98
Smpd3-201ENSMUST00000067512 1110025L11RikO09048 78 aa2.62□□□□□ -1.99
Smpd3-201ENSMUST00000067512 Krtap6-5Q925H3 78 aa2.62□□□□□ -1.99
Smpd3-201ENSMUST00000067512 Muc19Q6PZE0 7524 aa2.57□□□□□ -2
Smpd3-201ENSMUST00000067512 Gm4553A0A1B0GSA9 284 aa2.53□□□□□ -2
Smpd3-201ENSMUST00000067512 Hmcn1D3YXG0 5634 aa2.51□□□□□ -2.01
Smpd3-201ENSMUST00000067512 Gm45337A0A1B0GS71 263 aa2.49□□□□□ -2.01
Smpd3-201ENSMUST00000067512 Gm10229O08631 77 aa2.47□□□□□ -2.01
Smpd3-201ENSMUST00000067512 Gm40460A0A1B0GR10 244 aa2.44□□□□□ -2.02
Smpd3-201ENSMUST00000067512 Gm7579A0A1B0GRJ4 243 aa2.44□□□□□ -2.02
Smpd3-201ENSMUST00000067512 Krtap5-5Q2TA51 241 aa2.44□□□□□ -2.02
Smpd3-201ENSMUST00000067512 Krtap5-4Q62220 223 aa2.44□□□□□ -2.02
Smpd3-201ENSMUST00000067512 Gm39115A0A1B0GSH7 232 aa2.38□□□□□ -2.03
Smpd3-201ENSMUST00000067512 Gm2431E9Q8S1 172 aa2.38□□□□□ -2.03
Smpd3-201ENSMUST00000067512 Gm10153A0A1B0GRL1 320 aa2.37□□□□□ -2.03
Smpd3-201ENSMUST00000067512 Phgr1Q8K0G7 91 aa2.32□□□□□ -2.04
Smpd3-201ENSMUST00000067512 AhnakE9Q616 5656 aaKnown RBP2.29□□□□□ -2.04
Smpd3-201ENSMUST00000067512 Gm45618A0A1B0GSA0 219 aa2.24□□□□□ -2.05
Smpd3-201ENSMUST00000067512 Krtap6-2O08884 159 aa2.03□□□□□ -2.09
Smpd3-201ENSMUST00000067512 Krtap21-1Q925H4 128 aa1.85□□□□□ -2.11
Smpd3-201ENSMUST00000067512 Gm29735A0A1B0GT06 219 aa1.83□□□□□ -2.12
Smpd3-201ENSMUST00000067512 Gm11567Q9D141 195 aa1.81□□□□□ -2.12
Smpd3-201ENSMUST00000067512 Krtap5-1Q64507 230 aa1.4□□□□□ -2.18
Smpd3-201ENSMUST00000067512 Gm4559A4IF42 199 aa1.25□□□□□ -2.21
Retrieved 80 of 22,080 RNA–protein pairs in 117.4 ms