RNA–Protein interactions for RNA: ENSMUST00000039174.10

Prdm1-201, Transcript of PR domain zinc finger protein 1, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Prdm1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1-201ENSMUST00000039174 Herc1E9PZP8 4859 aa3.61□□□□□ -1.83
Prdm1-201ENSMUST00000039174 Krtap4-2B1AQ85 167 aa3.6□□□□□ -1.83
Prdm1-201ENSMUST00000039174 Birc6O88738 4882 aa3.59□□□□□ -1.84
Prdm1-201ENSMUST00000039174 Krtap4-6Q3V4B7 195 aa3.57□□□□□ -1.84
Prdm1-201ENSMUST00000039174 Muc16A0A140LJ72 8478 aa3.56□□□□□ -1.84
Prdm1-201ENSMUST00000039174 A0A286YCP9 139 aa3.49□□□□□ -1.85
Prdm1-201ENSMUST00000039174 Sprr2dO70555 85 aa3.46□□□□□ -1.85
Prdm1-201ENSMUST00000039174 Ubr4A2AN08 5180 aa3.46□□□□□ -1.86
Prdm1-201ENSMUST00000039174 Fsip2A2ARZ3 6995 aa3.41□□□□□ -1.86
Prdm1-201ENSMUST00000039174 Krtap31-1Q9D644 177 aa3.41□□□□□ -1.86
Prdm1-201ENSMUST00000039174 Sprr2hO70559 108 aa3.39□□□□□ -1.87
Prdm1-201ENSMUST00000039174 Krtap4-1Q3UUY3 169 aa3.39□□□□□ -1.87
Prdm1-201ENSMUST00000039174 Fat4Q2PZL6 4981 aa3.39□□□□□ -1.87
Prdm1-201ENSMUST00000039174 2300003K06RikA2A4M0 262 aa3.38□□□□□ -1.87
Prdm1-201ENSMUST00000039174 4932415D10RikA0A1W2P6U8 4986 aa3.38□□□□□ -1.87
Prdm1-201ENSMUST00000039174 Lce1a2Q9D1K4 149 aa3.37□□□□□ -1.87
Prdm1-201ENSMUST00000039174 Rnf213E9Q555 5152 aaKnown RBP3.36□□□□□ -1.87
Prdm1-201ENSMUST00000039174 Krtap4-7Q9D732 168 aa3.36□□□□□ -1.87
Prdm1-201ENSMUST00000039174 ZanO88799 5376 aa3.35□□□□□ -1.87
Prdm1-201ENSMUST00000039174 Krtap4-9B1AQA9 244 aa3.35□□□□□ -1.87
Prdm1-201ENSMUST00000039174 Gm11562A0PK51 136 aa3.34□□□□□ -1.87
Prdm1-201ENSMUST00000039174 Syne2Q6ZWQ0 6874 aaKnown RBP3.34□□□□□ -1.87
Prdm1-201ENSMUST00000039174 ObscnA2AAJ9 8891 aaKnown RBP3.34□□□□□ -1.87
Prdm1-201ENSMUST00000039174 Gm11564A2A4L9 201 aa3.32□□□□□ -1.88
Prdm1-201ENSMUST00000039174 Gm11563B1AQ90 168 aa3.32□□□□□ -1.88
Prdm1-201ENSMUST00000039174 Gm11595B1AQA7 289 aa3.32□□□□□ -1.88
Prdm1-201ENSMUST00000039174 Krtap4-8B1AQA8 209 aa3.32□□□□□ -1.88
Prdm1-201ENSMUST00000039174 Gm11596B1AQB0 205 aa3.32□□□□□ -1.88
Prdm1-201ENSMUST00000039174 Gm11938Q9D3H4 131 aa3.29□□□□□ -1.88
Prdm1-201ENSMUST00000039174 Lce1kJ3QP15 125 aa3.29□□□□□ -1.88
Prdm1-201ENSMUST00000039174 Krtap4-13Q9D7P3 165 aa3.27□□□□□ -1.89
Prdm1-201ENSMUST00000039174 Muc5bE9Q5I3 4800 aa3.23□□□□□ -1.89
Prdm1-201ENSMUST00000039174 Mt3P28184 68 aa3.22□□□□□ -1.89
Prdm1-201ENSMUST00000039174 Ush2AQ2QI47 5193 aa3.22□□□□□ -1.89
Prdm1-201ENSMUST00000039174 Hmcn2A2AJ76 5100 aa3.2□□□□□ -1.9
Prdm1-201ENSMUST00000039174 Lce1a1Q9CQH5 143 aa3.18□□□□□ -1.9
Prdm1-201ENSMUST00000039174 Krtap4-16Q91W93 202 aa3.17□□□□□ -1.9
Prdm1-201ENSMUST00000039174 Sprr2bO70554 98 aa3.16□□□□□ -1.9
Prdm1-201ENSMUST00000039174 Krtap17-1A2A5X6 109 aa3.11□□□□□ -1.91
Prdm1-201ENSMUST00000039174 Macf1Q9QXZ0 7354 aaKnown RBP3.07□□□□□ -1.92
Prdm1-201ENSMUST00000039174 Krtap31-2Q8CAY5 177 aa3.06□□□□□ -1.92
Prdm1-201ENSMUST00000039174 Gm11554B1AQB2 190 aa3.03□□□□□ -1.92
Prdm1-201ENSMUST00000039174 DstQ91ZU6 7393 aaKnown RBP3.01□□□□□ -1.93
Prdm1-201ENSMUST00000039174 Gm11555B1AQ89 175 aa2.94□□□□□ -1.94
Prdm1-201ENSMUST00000039174 Krtap6-3A0A087WQL6 57 aa2.93□□□□□ -1.94
Prdm1-201ENSMUST00000039174 NebE9Q1W3 7152 aa2.91□□□□□ -1.94
Prdm1-201ENSMUST00000039174 SspoQ8CG65 4998 aa2.91□□□□□ -1.94
Prdm1-201ENSMUST00000039174 Mt1P02802 61 aaKnown RBP2.89□□□□□ -1.95
Prdm1-201ENSMUST00000039174 Kmt2dQ6PDK2 5588 aa2.84□□□□□ -1.96
Prdm1-201ENSMUST00000039174 Krtap20-2E9Q0A8 60 aa2.81□□□□□ -1.96
Prdm1-201ENSMUST00000039174 Eppk1Q8R0W0 6548 aa2.78□□□□□ -1.96
Prdm1-201ENSMUST00000039174 Muc19Q6PZE0 7524 aa2.66□□□□□ -1.98
Prdm1-201ENSMUST00000039174 Gpr98Q8VHN7 6298 aaKnown RBP2.43□□□□□ -2.02
Prdm1-201ENSMUST00000039174 1110025L11RikO09048 78 aa2.38□□□□□ -2.03
Prdm1-201ENSMUST00000039174 Krtap6-5Q925H3 78 aa2.38□□□□□ -2.03
Prdm1-201ENSMUST00000039174 Gm45618A0A1B0GSA0 219 aa2.37□□□□□ -2.03
Prdm1-201ENSMUST00000039174 Gm11639A0A1D5RLM8 5808 aa2.36□□□□□ -2.03
Prdm1-201ENSMUST00000039174 Gm10229O08631 77 aa2.29□□□□□ -2.04
Prdm1-201ENSMUST00000039174 Phgr1Q8K0G7 91 aa2.21□□□□□ -2.06
Prdm1-201ENSMUST00000039174 Gm39115A0A1B0GSH7 232 aa2.16□□□□□ -2.06
Prdm1-201ENSMUST00000039174 Gm45337A0A1B0GS71 263 aa2.14□□□□□ -2.07
Prdm1-201ENSMUST00000039174 Hmcn1D3YXG0 5634 aa2.12□□□□□ -2.07
Prdm1-201ENSMUST00000039174 Gm11559Q9D3H7 191 aa2.11□□□□□ -2.07
Prdm1-201ENSMUST00000039174 Gm11568A2A4M2 211 aa2.04□□□□□ -2.08
Prdm1-201ENSMUST00000039174 Krtap9-1Q64526 186 aa2.04□□□□□ -2.08
Prdm1-201ENSMUST00000039174 Gm29735A0A1B0GT06 219 aa2□□□□□ -2.09
Prdm1-201ENSMUST00000039174 Gm2431E9Q8S1 172 aa1.95□□□□□ -2.1
Prdm1-201ENSMUST00000039174 Krtap6-2O08884 159 aa1.83□□□□□ -2.12
Prdm1-201ENSMUST00000039174 Gm10153A0A1B0GRL1 320 aa1.81□□□□□ -2.12
Prdm1-201ENSMUST00000039174 Krtap5-2Q9D5Z7 189 aa1.81□□□□□ -2.12
Prdm1-201ENSMUST00000039174 AhnakE9Q616 5656 aaKnown RBP1.79□□□□□ -2.12
Prdm1-201ENSMUST00000039174 Gm11567Q9D141 195 aa1.75□□□□□ -2.13
Prdm1-201ENSMUST00000039174 Krtap5-4Q62220 223 aa1.73□□□□□ -2.13
Prdm1-201ENSMUST00000039174 Krtap5-1Q64507 230 aa1.73□□□□□ -2.13
Prdm1-201ENSMUST00000039174 Gm4553A0A1B0GSA9 284 aa1.71□□□□□ -2.14
Prdm1-201ENSMUST00000039174 Krtap21-1Q925H4 128 aa1.61□□□□□ -2.15
Prdm1-201ENSMUST00000039174 Gm40460A0A1B0GR10 244 aa1.52□□□□□ -2.17
Prdm1-201ENSMUST00000039174 Gm7579A0A1B0GRJ4 243 aa1.52□□□□□ -2.17
Prdm1-201ENSMUST00000039174 Krtap5-5Q2TA51 241 aa1.52□□□□□ -2.17
Prdm1-201ENSMUST00000039174 Gm4559A4IF42 199 aa1.46□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 98.4 ms