RNA–Protein interactions for RNA: ENSMUST00000029783.15

Snx27-201, Transcript of Sorting nexin-27, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Snx27, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27-201ENSMUST00000029783 Krtap4-7Q9D732 168 aa5.47□□□□□ -1.53
Snx27-201ENSMUST00000029783 Krtap4-13Q9D7P3 165 aa5.41□□□□□ -1.54
Snx27-201ENSMUST00000029783 Mdn1A2ANY6 5589 aaKnown RBP5.4□□□□□ -1.55
Snx27-201ENSMUST00000029783 Krtap4-16Q91W93 202 aa5.29□□□□□ -1.56
Snx27-201ENSMUST00000029783 Pkhd1l1Q80ZA4 4249 aa5.26□□□□□ -1.57
Snx27-201ENSMUST00000029783 Syne2Q6ZWQ0 6874 aaKnown RBP5.23□□□□□ -1.57
Snx27-201ENSMUST00000029783 Sprr2hO70559 108 aa5.21□□□□□ -1.58
Snx27-201ENSMUST00000029783 Gm11562A0PK51 136 aa5.21□□□□□ -1.58
Snx27-201ENSMUST00000029783 Lce1a1Q9CQH5 143 aa5.15□□□□□ -1.58
Snx27-201ENSMUST00000029783 Muc5bE9Q5I3 4800 aa5.15□□□□□ -1.58
Snx27-201ENSMUST00000029783 Krtap31-2Q8CAY5 177 aa5.14□□□□□ -1.59
Snx27-201ENSMUST00000029783 Lce1a2Q9D1K4 149 aa5.14□□□□□ -1.59
Snx27-201ENSMUST00000029783 Lce1kJ3QP15 125 aa5.11□□□□□ -1.59
Snx27-201ENSMUST00000029783 Fat4Q2PZL6 4981 aa5.1□□□□□ -1.59
Snx27-201ENSMUST00000029783 Fsip2A2ARZ3 6995 aa5.1□□□□□ -1.59
Snx27-201ENSMUST00000029783 ZanO88799 5376 aa5.08□□□□□ -1.6
Snx27-201ENSMUST00000029783 Krtap6-3A0A087WQL6 57 aa5.07□□□□□ -1.6
Snx27-201ENSMUST00000029783 Sprr2dO70555 85 aa5.03□□□□□ -1.6
Snx27-201ENSMUST00000029783 Ubr4A2AN08 5180 aa5□□□□□ -1.61
Snx27-201ENSMUST00000029783 Abca13Q5SSE9 5034 aa4.95□□□□□ -1.62
Snx27-201ENSMUST00000029783 Gm11938Q9D3H4 131 aa4.92□□□□□ -1.62
Snx27-201ENSMUST00000029783 Gm11554B1AQB2 190 aa4.91□□□□□ -1.62
Snx27-201ENSMUST00000029783 Syne1Q6ZWR6 8799 aa4.89□□□□□ -1.63
Snx27-201ENSMUST00000029783 Mt3P28184 68 aa4.86□□□□□ -1.63
Snx27-201ENSMUST00000029783 Ush2AQ2QI47 5193 aa4.77□□□□□ -1.65
Snx27-201ENSMUST00000029783 Rnf213E9Q555 5152 aaKnown RBP4.72□□□□□ -1.65
Snx27-201ENSMUST00000029783 Sprr2bO70554 98 aa4.67□□□□□ -1.66
Snx27-201ENSMUST00000029783 Hmcn2A2AJ76 5100 aa4.59□□□□□ -1.68
Snx27-201ENSMUST00000029783 Krtap20-2E9Q0A8 60 aa4.56□□□□□ -1.68
Snx27-201ENSMUST00000029783 SspoQ8CG65 4998 aa4.51□□□□□ -1.69
Snx27-201ENSMUST00000029783 Eppk1Q8R0W0 6548 aa4.43□□□□□ -1.7
Snx27-201ENSMUST00000029783 Mt1P02802 61 aaKnown RBP4.28□□□□□ -1.72
Snx27-201ENSMUST00000029783 Gm11555B1AQ89 175 aa4.17□□□□□ -1.74
Snx27-201ENSMUST00000029783 NebE9Q1W3 7152 aa4.01□□□□□ -1.77
Snx27-201ENSMUST00000029783 Muc16A0A140LJ72 8478 aa4.01□□□□□ -1.77
Snx27-201ENSMUST00000029783 Macf1Q9QXZ0 7354 aaKnown RBP3.99□□□□□ -1.77
Snx27-201ENSMUST00000029783 DstQ91ZU6 7393 aaKnown RBP3.97□□□□□ -1.77
Snx27-201ENSMUST00000029783 ObscnA2AAJ9 8891 aaKnown RBP3.82□□□□□ -1.8
Snx27-201ENSMUST00000029783 Kmt2dQ6PDK2 5588 aa3.77□□□□□ -1.81
Snx27-201ENSMUST00000029783 Gm11559Q9D3H7 191 aa3.7□□□□□ -1.82
Snx27-201ENSMUST00000029783 1110025L11RikO09048 78 aa3.47□□□□□ -1.85
Snx27-201ENSMUST00000029783 Krtap6-5Q925H3 78 aa3.47□□□□□ -1.85
Snx27-201ENSMUST00000029783 Gm11568A2A4M2 211 aa3.41□□□□□ -1.86
Snx27-201ENSMUST00000029783 Krtap9-1Q64526 186 aa3.41□□□□□ -1.86
Snx27-201ENSMUST00000029783 Muc19Q6PZE0 7524 aa3.4□□□□□ -1.87
Snx27-201ENSMUST00000029783 Phgr1Q8K0G7 91 aa3.38□□□□□ -1.87
Snx27-201ENSMUST00000029783 Gpr98Q8VHN7 6298 aaKnown RBP3.37□□□□□ -1.87
Snx27-201ENSMUST00000029783 Gm10229O08631 77 aa3.36□□□□□ -1.87
Snx27-201ENSMUST00000029783 A0A1Y7VLE6 161 aa3.31□□□□□ -1.88
Snx27-201ENSMUST00000029783 Gm11639A0A1D5RLM8 5808 aa3.22□□□□□ -1.89
Snx27-201ENSMUST00000029783 Gm11567Q9D141 195 aa3.21□□□□□ -1.9
Snx27-201ENSMUST00000029783 Krtap5-2Q9D5Z7 189 aa3.01□□□□□ -1.93
Snx27-201ENSMUST00000029783 Krtap28-10A0A1Y7VP58 119 aa2.95□□□□□ -1.94
Snx27-201ENSMUST00000029783 A030003K21RikA0A1Y7VIM3 128 aa2.93□□□□□ -1.94
Snx27-201ENSMUST00000029783 Gm4553A0A1B0GSA9 284 aa2.89□□□□□ -1.95
Snx27-201ENSMUST00000029783 Gm7544A0A1Y7VJ58 118 aa2.89□□□□□ -1.95
Snx27-201ENSMUST00000029783 Hmcn1D3YXG0 5634 aa2.89□□□□□ -1.95
Snx27-201ENSMUST00000029783 A030005L19RikA0A1Y7VIU2 113 aa2.85□□□□□ -1.95
Snx27-201ENSMUST00000029783 A0A1Y7VJH8 109 aa2.78□□□□□ -1.96
Snx27-201ENSMUST00000029783 Gm2431E9Q8S1 172 aa2.77□□□□□ -1.97
Snx27-201ENSMUST00000029783 Gm6217A0A1Y7VJK9 128 aa2.76□□□□□ -1.97
Snx27-201ENSMUST00000029783 Krtap6-2O08884 159 aa2.72□□□□□ -1.97
Snx27-201ENSMUST00000029783 A030005K14RikA0A1Y7VNY1 122 aa2.71□□□□□ -1.98
Snx27-201ENSMUST00000029783 A0A1Y7VJ07 166 aa2.68□□□□□ -1.98
Snx27-201ENSMUST00000029783 Krtap28-13A0A087WQP5 138 aa2.67□□□□□ -1.98
Snx27-201ENSMUST00000029783 AhnakE9Q616 5656 aaKnown RBP2.6□□□□□ -1.99
Snx27-201ENSMUST00000029783 A030014E15RikA0A1Y7VJV2 120 aa2.47□□□□□ -2.01
Snx27-201ENSMUST00000029783 Gm10153A0A1B0GRL1 320 aa2.4□□□□□ -2.03
Snx27-201ENSMUST00000029783 Krtap21-1Q925H4 128 aa2.37□□□□□ -2.03
Snx27-201ENSMUST00000029783 Gm45337A0A1B0GS71 263 aa2.37□□□□□ -2.03
Snx27-201ENSMUST00000029783 Gm40460A0A1B0GR10 244 aa2.31□□□□□ -2.04
Snx27-201ENSMUST00000029783 Gm7579A0A1B0GRJ4 243 aa2.31□□□□□ -2.04
Snx27-201ENSMUST00000029783 Krtap5-5Q2TA51 241 aa2.31□□□□□ -2.04
Snx27-201ENSMUST00000029783 Krtap5-4Q62220 223 aa2.31□□□□□ -2.04
Snx27-201ENSMUST00000029783 Gm39115A0A1B0GSH7 232 aa2.26□□□□□ -2.05
Snx27-201ENSMUST00000029783 A0A286YCP9 139 aa2.14□□□□□ -2.07
Snx27-201ENSMUST00000029783 Gm45618A0A1B0GSA0 219 aa1.97□□□□□ -2.09
Snx27-201ENSMUST00000029783 Krtap5-1Q64507 230 aa1.73□□□□□ -2.13
Snx27-201ENSMUST00000029783 Gm29735A0A1B0GT06 219 aa1.7□□□□□ -2.14
Snx27-201ENSMUST00000029783 Gm4559A4IF42 199 aa0.99□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 76.4 ms