RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Krtap4-16Q91W93 202 aa3.76□□□□□ -1.81
Notch1-201ENSMUST00000028288 Gm11564A2A4L9 201 aa3.76□□□□□ -1.81
Notch1-201ENSMUST00000028288 Gm11563B1AQ90 168 aa3.76□□□□□ -1.81
Notch1-201ENSMUST00000028288 Gm11595B1AQA7 289 aa3.76□□□□□ -1.81
Notch1-201ENSMUST00000028288 Krtap4-8B1AQA8 209 aa3.76□□□□□ -1.81
Notch1-201ENSMUST00000028288 Abca13Q5SSE9 5034 aa3.75□□□□□ -1.81
Notch1-201ENSMUST00000028288 Lce1kJ3QP15 125 aa3.74□□□□□ -1.81
Notch1-201ENSMUST00000028288 Krtap4-9B1AQA9 244 aa3.72□□□□□ -1.81
Notch1-201ENSMUST00000028288 Birc6O88738 4882 aa3.7□□□□□ -1.82
Notch1-201ENSMUST00000028288 Krtap4-13Q9D7P3 165 aa3.69□□□□□ -1.82
Notch1-201ENSMUST00000028288 Mt3P28184 68 aa3.69□□□□□ -1.82
Notch1-201ENSMUST00000028288 Ubr4A2AN08 5180 aa3.6□□□□□ -1.83
Notch1-201ENSMUST00000028288 Mdn1A2ANY6 5589 aaKnown RBP3.59□□□□□ -1.83
Notch1-201ENSMUST00000028288 HydinQ80W93 5154 aa3.59□□□□□ -1.83
Notch1-201ENSMUST00000028288 Krtap31-2Q8CAY5 177 aa3.59□□□□□ -1.83
Notch1-201ENSMUST00000028288 Muc5bE9Q5I3 4800 aa3.58□□□□□ -1.84
Notch1-201ENSMUST00000028288 Syne2Q6ZWQ0 6874 aaKnown RBP3.54□□□□□ -1.84
Notch1-201ENSMUST00000028288 Hmcn2A2AJ76 5100 aa3.53□□□□□ -1.84
Notch1-201ENSMUST00000028288 4932415D10RikA0A1W2P6U8 4986 aa3.5□□□□□ -1.85
Notch1-201ENSMUST00000028288 Lce1a1Q9CQH5 143 aa3.49□□□□□ -1.85
Notch1-201ENSMUST00000028288 Mt1P02802 61 aaKnown RBP3.42□□□□□ -1.86
Notch1-201ENSMUST00000028288 Fat4Q2PZL6 4981 aa3.37□□□□□ -1.87
Notch1-201ENSMUST00000028288 Sprr2bO70554 98 aa3.32□□□□□ -1.88
Notch1-201ENSMUST00000028288 Syne1Q6ZWR6 8799 aa3.32□□□□□ -1.88
Notch1-201ENSMUST00000028288 Fsip2A2ARZ3 6995 aa3.31□□□□□ -1.88
Notch1-201ENSMUST00000028288 Ush2AQ2QI47 5193 aa3.31□□□□□ -1.88
Notch1-201ENSMUST00000028288 Rnf213E9Q555 5152 aaKnown RBP3.3□□□□□ -1.88
Notch1-201ENSMUST00000028288 Gm11554B1AQB2 190 aa3.3□□□□□ -1.88
Notch1-201ENSMUST00000028288 Krtap6-3A0A087WQL6 57 aa3.29□□□□□ -1.88
Notch1-201ENSMUST00000028288 SspoQ8CG65 4998 aa3.22□□□□□ -1.89
Notch1-201ENSMUST00000028288 Krtap20-2E9Q0A8 60 aa3.17□□□□□ -1.9
Notch1-201ENSMUST00000028288 1110025L11RikO09048 78 aa2.82□□□□□ -1.96
Notch1-201ENSMUST00000028288 Krtap6-5Q925H3 78 aa2.82□□□□□ -1.96
Notch1-201ENSMUST00000028288 ObscnA2AAJ9 8891 aaKnown RBP2.8□□□□□ -1.96
Notch1-201ENSMUST00000028288 Gm11555B1AQ89 175 aa2.76□□□□□ -1.97
Notch1-201ENSMUST00000028288 Gm10229O08631 77 aa2.7□□□□□ -1.98
Notch1-201ENSMUST00000028288 Muc16A0A140LJ72 8478 aa2.61□□□□□ -1.99
Notch1-201ENSMUST00000028288 Phgr1Q8K0G7 91 aa2.59□□□□□ -1.99
Notch1-201ENSMUST00000028288 Gm11568A2A4M2 211 aa2.54□□□□□ -2
Notch1-201ENSMUST00000028288 Krtap9-1Q64526 186 aa2.54□□□□□ -2
Notch1-201ENSMUST00000028288 Eppk1Q8R0W0 6548 aa2.53□□□□□ -2
Notch1-201ENSMUST00000028288 Macf1Q9QXZ0 7354 aaKnown RBP2.5□□□□□ -2.01
Notch1-201ENSMUST00000028288 Gm11559Q9D3H7 191 aa2.49□□□□□ -2.01
Notch1-201ENSMUST00000028288 DstQ91ZU6 7393 aaKnown RBP2.48□□□□□ -2.01
Notch1-201ENSMUST00000028288 NebE9Q1W3 7152 aa2.47□□□□□ -2.01
Notch1-201ENSMUST00000028288 Kmt2dQ6PDK2 5588 aa2.45□□□□□ -2.02
Notch1-201ENSMUST00000028288 Muc19Q6PZE0 7524 aa2.38□□□□□ -2.03
Notch1-201ENSMUST00000028288 Krtap5-2Q9D5Z7 189 aa2.23□□□□□ -2.05
Notch1-201ENSMUST00000028288 Krtap6-2O08884 159 aa2.14□□□□□ -2.07
Notch1-201ENSMUST00000028288 Gm11639A0A1D5RLM8 5808 aa2.11□□□□□ -2.07
Notch1-201ENSMUST00000028288 Hmcn1D3YXG0 5634 aa2.07□□□□□ -2.08
Notch1-201ENSMUST00000028288 Gm4553A0A1B0GSA9 284 aa2.01□□□□□ -2.09
Notch1-201ENSMUST00000028288 A0A1Y7VLE6 161 aa1.99□□□□□ -2.09
Notch1-201ENSMUST00000028288 Krtap21-1Q925H4 128 aa1.99□□□□□ -2.09
Notch1-201ENSMUST00000028288 Gm11567Q9D141 195 aa1.94□□□□□ -2.1
Notch1-201ENSMUST00000028288 Gm2431E9Q8S1 172 aa1.94□□□□□ -2.1
Notch1-201ENSMUST00000028288 Gm10153A0A1B0GRL1 320 aa1.94□□□□□ -2.1
Notch1-201ENSMUST00000028288 Gpr98Q8VHN7 6298 aaKnown RBP1.93□□□□□ -2.1
Notch1-201ENSMUST00000028288 A030003K21RikA0A1Y7VIM3 128 aa1.8□□□□□ -2.12
Notch1-201ENSMUST00000028288 A030005L19RikA0A1Y7VIU2 113 aa1.76□□□□□ -2.13
Notch1-201ENSMUST00000028288 Gm45337A0A1B0GS71 263 aa1.72□□□□□ -2.13
Notch1-201ENSMUST00000028288 AhnakE9Q616 5656 aaKnown RBP1.71□□□□□ -2.14
Notch1-201ENSMUST00000028288 Gm40460A0A1B0GR10 244 aa1.65□□□□□ -2.15
Notch1-201ENSMUST00000028288 Gm7579A0A1B0GRJ4 243 aa1.65□□□□□ -2.15
Notch1-201ENSMUST00000028288 Krtap5-5Q2TA51 241 aa1.65□□□□□ -2.15
Notch1-201ENSMUST00000028288 Krtap5-4Q62220 223 aa1.65□□□□□ -2.15
Notch1-201ENSMUST00000028288 Gm6217A0A1Y7VJK9 128 aa1.63□□□□□ -2.15
Notch1-201ENSMUST00000028288 Gm39115A0A1B0GSH7 232 aa1.63□□□□□ -2.15
Notch1-201ENSMUST00000028288 Gm7544A0A1Y7VJ58 118 aa1.63□□□□□ -2.15
Notch1-201ENSMUST00000028288 A030005K14RikA0A1Y7VNY1 122 aa1.63□□□□□ -2.15
Notch1-201ENSMUST00000028288 Krtap28-10A0A1Y7VP58 119 aa1.61□□□□□ -2.15
Notch1-201ENSMUST00000028288 A0A1Y7VJ07 166 aa1.56□□□□□ -2.16
Notch1-201ENSMUST00000028288 A0A1Y7VJH8 109 aa1.55□□□□□ -2.16
Notch1-201ENSMUST00000028288 Krtap28-13A0A087WQP5 138 aa1.48□□□□□ -2.17
Notch1-201ENSMUST00000028288 A030014E15RikA0A1Y7VJV2 120 aa1.31□□□□□ -2.2
Notch1-201ENSMUST00000028288 Gm29735A0A1B0GT06 219 aa1.29□□□□□ -2.2
Notch1-201ENSMUST00000028288 Gm45618A0A1B0GSA0 219 aa1.28□□□□□ -2.2
Notch1-201ENSMUST00000028288 A0A286YCP9 139 aa1.17□□□□□ -2.22
Notch1-201ENSMUST00000028288 Krtap5-1Q64507 230 aa1.09□□□□□ -2.24
Notch1-201ENSMUST00000028288 Gm4559A4IF42 199 aa0.64□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 11.9 ms