RNA–Protein interactions for RNA: ENSMUST00000021135.4

Ncbp3-201, Transcript of Nuclear cap-binding protein subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncbp3, Length 12,106 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp3-201ENSMUST00000021135 Krtap4-9B1AQA9 244 aa2.15□□□□□ -2.07
Ncbp3-201ENSMUST00000021135 Krtap4-13Q9D7P3 165 aa2.12□□□□□ -2.07
Ncbp3-201ENSMUST00000021135 Gm11564A2A4L9 201 aa2.12□□□□□ -2.07
Ncbp3-201ENSMUST00000021135 Gm11563B1AQ90 168 aa2.12□□□□□ -2.07
Ncbp3-201ENSMUST00000021135 Gm11595B1AQA7 289 aa2.12□□□□□ -2.07
Ncbp3-201ENSMUST00000021135 Krtap4-8B1AQA8 209 aa2.12□□□□□ -2.07
Ncbp3-201ENSMUST00000021135 Dnhd1D3Z2X2 4750 aa2.11□□□□□ -2.07
Ncbp3-201ENSMUST00000021135 ObscnA2AAJ9 8891 aaKnown RBP2.09□□□□□ -2.07
Ncbp3-201ENSMUST00000021135 Ryr3A2AGL3 4863 aa2.07□□□□□ -2.08
Ncbp3-201ENSMUST00000021135 Gm11596B1AQB0 205 aa2.07□□□□□ -2.08
Ncbp3-201ENSMUST00000021135 Hmcn2A2AJ76 5100 aa2.03□□□□□ -2.08
Ncbp3-201ENSMUST00000021135 Muc16A0A140LJ72 8478 aa2.03□□□□□ -2.08
Ncbp3-201ENSMUST00000021135 Syne2Q6ZWQ0 6874 aaKnown RBP2□□□□□ -2.09
Ncbp3-201ENSMUST00000021135 Gm11554B1AQB2 190 aa2□□□□□ -2.09
Ncbp3-201ENSMUST00000021135 Herc2Q4U2R1 4836 aa1.98□□□□□ -2.09
Ncbp3-201ENSMUST00000021135 PcloQ9QYX7 5068 aa1.97□□□□□ -2.09
Ncbp3-201ENSMUST00000021135 A030005K14RikA0A1Y7VNY1 122 aa1.96□□□□□ -2.1
Ncbp3-201ENSMUST00000021135 Krtap28-10A0A1Y7VP58 119 aa1.93□□□□□ -2.1
Ncbp3-201ENSMUST00000021135 Krtap6-3A0A087WQL6 57 aa1.91□□□□□ -2.1
Ncbp3-201ENSMUST00000021135 A030003K21RikA0A1Y7VIM3 128 aa1.9□□□□□ -2.11
Ncbp3-201ENSMUST00000021135 Fsip2A2ARZ3 6995 aa1.88□□□□□ -2.11
Ncbp3-201ENSMUST00000021135 Phgr1Q8K0G7 91 aa1.88□□□□□ -2.11
Ncbp3-201ENSMUST00000021135 Mdn1A2ANY6 5589 aaKnown RBP1.85□□□□□ -2.11
Ncbp3-201ENSMUST00000021135 Herc1E9PZP8 4859 aa1.84□□□□□ -2.11
Ncbp3-201ENSMUST00000021135 Gm11567Q9D141 195 aa1.83□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 Gm11568A2A4M2 211 aa1.83□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 Krtap9-1Q64526 186 aa1.83□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 Gm11559Q9D3H7 191 aa1.83□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 HydinQ80W93 5154 aa1.83□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 Ryr2E9Q401 4966 aaKnown RBP1.83□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 4932415D10RikA0A1W2P6U8 4986 aa1.83□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 Krtap20-2E9Q0A8 60 aa1.82□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 Kiaa1109A2AAE1 5005 aa1.8□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 1110025L11RikO09048 78 aa1.8□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 Krtap6-5Q925H3 78 aa1.8□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 A0A286YCP9 139 aa1.79□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 Birc6O88738 4882 aa1.78□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 Gm6217A0A1Y7VJK9 128 aa1.78□□□□□ -2.12
Ncbp3-201ENSMUST00000021135 Ubr4A2AN08 5180 aa1.77□□□□□ -2.13
Ncbp3-201ENSMUST00000021135 A030005L19RikA0A1Y7VIU2 113 aa1.76□□□□□ -2.13
Ncbp3-201ENSMUST00000021135 Gm10229O08631 77 aa1.76□□□□□ -2.13
Ncbp3-201ENSMUST00000021135 ZanO88799 5376 aa1.67□□□□□ -2.14
Ncbp3-201ENSMUST00000021135 SspoQ8CG65 4998 aa1.67□□□□□ -2.14
Ncbp3-201ENSMUST00000021135 Krtap28-13A0A087WQP5 138 aa1.66□□□□□ -2.14
Ncbp3-201ENSMUST00000021135 Muc5bE9Q5I3 4800 aa1.64□□□□□ -2.15
Ncbp3-201ENSMUST00000021135 Gm7544A0A1Y7VJ58 118 aa1.64□□□□□ -2.15
Ncbp3-201ENSMUST00000021135 A0A1Y7VJ07 166 aa1.59□□□□□ -2.15
Ncbp3-201ENSMUST00000021135 Abca13Q5SSE9 5034 aa1.57□□□□□ -2.16
Ncbp3-201ENSMUST00000021135 Gm11555B1AQ89 175 aa1.53□□□□□ -2.16
Ncbp3-201ENSMUST00000021135 Ush2AQ2QI47 5193 aa1.48□□□□□ -2.17
Ncbp3-201ENSMUST00000021135 Fat4Q2PZL6 4981 aa1.48□□□□□ -2.17
Ncbp3-201ENSMUST00000021135 DstQ91ZU6 7393 aaKnown RBP1.45□□□□□ -2.18
Ncbp3-201ENSMUST00000021135 Rnf213E9Q555 5152 aaKnown RBP1.44□□□□□ -2.18
Ncbp3-201ENSMUST00000021135 A0A1Y7VJH8 109 aa1.43□□□□□ -2.18
Ncbp3-201ENSMUST00000021135 Muc19Q6PZE0 7524 aa1.43□□□□□ -2.18
Ncbp3-201ENSMUST00000021135 A030014E15RikA0A1Y7VJV2 120 aa1.42□□□□□ -2.18
Ncbp3-201ENSMUST00000021135 NebE9Q1W3 7152 aa1.41□□□□□ -2.18
Ncbp3-201ENSMUST00000021135 Macf1Q9QXZ0 7354 aaKnown RBP1.38□□□□□ -2.19
Ncbp3-201ENSMUST00000021135 Eppk1Q8R0W0 6548 aa1.37□□□□□ -2.19
Ncbp3-201ENSMUST00000021135 Krtap6-2O08884 159 aa1.35□□□□□ -2.19
Ncbp3-201ENSMUST00000021135 Kmt2dQ6PDK2 5588 aa1.33□□□□□ -2.2
Ncbp3-201ENSMUST00000021135 Krtap21-1Q925H4 128 aa1.22□□□□□ -2.21
Ncbp3-201ENSMUST00000021135 Gpr98Q8VHN7 6298 aaKnown RBP1.18□□□□□ -2.22
Ncbp3-201ENSMUST00000021135 Krtap5-2Q9D5Z7 189 aa1.12□□□□□ -2.23
Ncbp3-201ENSMUST00000021135 Gm10153A0A1B0GRL1 320 aa1.05□□□□□ -2.24
Ncbp3-201ENSMUST00000021135 Gm11639A0A1D5RLM8 5808 aa1.04□□□□□ -2.24
Ncbp3-201ENSMUST00000021135 Gm4553A0A1B0GSA9 284 aa1.02□□□□□ -2.25
Ncbp3-201ENSMUST00000021135 Gm45337A0A1B0GS71 263 aa1.01□□□□□ -2.25
Ncbp3-201ENSMUST00000021135 Hmcn1D3YXG0 5634 aa1□□□□□ -2.25
Ncbp3-201ENSMUST00000021135 Gm40460A0A1B0GR10 244 aa1□□□□□ -2.25
Ncbp3-201ENSMUST00000021135 Gm7579A0A1B0GRJ4 243 aa1□□□□□ -2.25
Ncbp3-201ENSMUST00000021135 Krtap5-5Q2TA51 241 aa1□□□□□ -2.25
Ncbp3-201ENSMUST00000021135 Krtap5-4Q62220 223 aa1□□□□□ -2.25
Ncbp3-201ENSMUST00000021135 Gm39115A0A1B0GSH7 232 aa0.97□□□□□ -2.25
Ncbp3-201ENSMUST00000021135 Gm45618A0A1B0GSA0 219 aa0.96□□□□□ -2.26
Ncbp3-201ENSMUST00000021135 Gm2431E9Q8S1 172 aa0.96□□□□□ -2.26
Ncbp3-201ENSMUST00000021135 Gm29735A0A1B0GT06 219 aa0.89□□□□□ -2.27
Ncbp3-201ENSMUST00000021135 AhnakE9Q616 5656 aaKnown RBP0.84□□□□□ -2.28
Ncbp3-201ENSMUST00000021135 Krtap5-1Q64507 230 aa0.68□□□□□ -2.3
Ncbp3-201ENSMUST00000021135 Gm4559A4IF42 199 aa0.67□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 90.2 ms