RNA–Protein interactions for RNA: ENSMUST00000017290.10

Brca1-201, Transcript of Breast cancer type 1 susceptibility protein homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Brca1, Length 6,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1-201ENSMUST00000017290 Gm9789Q8BIG3 52 aa2.36□□□□□ -2.03
Brca1-201ENSMUST00000017290 Mt3P28184 68 aa2.34□□□□□ -2.04
Brca1-201ENSMUST00000017290 Gm11938Q9D3H4 131 aa2.33□□□□□ -2.04
Brca1-201ENSMUST00000017290 Dnhd1D3Z2X2 4750 aa2.33□□□□□ -2.04
Brca1-201ENSMUST00000017290 Gm11596B1AQB0 205 aa2.32□□□□□ -2.04
Brca1-201ENSMUST00000017290 Gm11564A2A4L9 201 aa2.31□□□□□ -2.04
Brca1-201ENSMUST00000017290 Gm11595B1AQA7 289 aa2.31□□□□□ -2.04
Brca1-201ENSMUST00000017290 Krtap4-8B1AQA8 209 aa2.31□□□□□ -2.04
Brca1-201ENSMUST00000017290 Krtap4-9B1AQA9 244 aa2.3□□□□□ -2.04
Brca1-201ENSMUST00000017290 Krtap4-13Q9D7P3 165 aa2.3□□□□□ -2.04
Brca1-201ENSMUST00000017290 Herc1E9PZP8 4859 aa2.3□□□□□ -2.04
Brca1-201ENSMUST00000017290 Ubr4A2AN08 5180 aa2.23□□□□□ -2.05
Brca1-201ENSMUST00000017290 Hmcn2A2AJ76 5100 aa2.21□□□□□ -2.06
Brca1-201ENSMUST00000017290 Krtap17-1A2A5X6 109 aa2.2□□□□□ -2.06
Brca1-201ENSMUST00000017290 Herc2Q4U2R1 4836 aa2.18□□□□□ -2.06
Brca1-201ENSMUST00000017290 A0A1Y7VJH8 109 aa2.18□□□□□ -2.06
Brca1-201ENSMUST00000017290 Gm11554B1AQB2 190 aa2.18□□□□□ -2.06
Brca1-201ENSMUST00000017290 A0A1Y7VLE6 161 aa2.13□□□□□ -2.07
Brca1-201ENSMUST00000017290 Kiaa1109A2AAE1 5005 aa2.11□□□□□ -2.07
Brca1-201ENSMUST00000017290 Krtap28-10A0A1Y7VP58 119 aa2.1□□□□□ -2.07
Brca1-201ENSMUST00000017290 Krtap28-13A0A087WQP5 138 aa2.09□□□□□ -2.08
Brca1-201ENSMUST00000017290 Lrp2A2ARV4 4660 aa2.09□□□□□ -2.08
Brca1-201ENSMUST00000017290 Ush2AQ2QI47 5193 aa2.08□□□□□ -2.08
Brca1-201ENSMUST00000017290 A030005K14RikA0A1Y7VNY1 122 aa2.07□□□□□ -2.08
Brca1-201ENSMUST00000017290 ZanO88799 5376 aa2.06□□□□□ -2.08
Brca1-201ENSMUST00000017290 Fat4Q2PZL6 4981 aa2.06□□□□□ -2.08
Brca1-201ENSMUST00000017290 Mdn1A2ANY6 5589 aaKnown RBP2.06□□□□□ -2.08
Brca1-201ENSMUST00000017290 Rnf213E9Q555 5152 aaKnown RBP2.05□□□□□ -2.08
Brca1-201ENSMUST00000017290 Syne1Q6ZWR6 8799 aa2.02□□□□□ -2.09
Brca1-201ENSMUST00000017290 Fsip2A2ARZ3 6995 aa2.02□□□□□ -2.09
Brca1-201ENSMUST00000017290 Krtap6-3A0A087WQL6 57 aa1.99□□□□□ -2.09
Brca1-201ENSMUST00000017290 4932415D10RikA0A1W2P6U8 4986 aa1.98□□□□□ -2.09
Brca1-201ENSMUST00000017290 Syne2Q6ZWQ0 6874 aaKnown RBP1.98□□□□□ -2.09
Brca1-201ENSMUST00000017290 Mt1P02802 61 aaKnown RBP1.94□□□□□ -2.1
Brca1-201ENSMUST00000017290 A030005L19RikA0A1Y7VIU2 113 aa1.89□□□□□ -2.11
Brca1-201ENSMUST00000017290 Krtap20-2E9Q0A8 60 aa1.89□□□□□ -2.11
Brca1-201ENSMUST00000017290 Gm7544A0A1Y7VJ58 118 aa1.88□□□□□ -2.11
Brca1-201ENSMUST00000017290 A0A1Y7VJ07 166 aa1.88□□□□□ -2.11
Brca1-201ENSMUST00000017290 A030014E15RikA0A1Y7VJV2 120 aa1.87□□□□□ -2.11
Brca1-201ENSMUST00000017290 Muc5bE9Q5I3 4800 aa1.87□□□□□ -2.11
Brca1-201ENSMUST00000017290 Macf1Q9QXZ0 7354 aaKnown RBP1.84□□□□□ -2.11
Brca1-201ENSMUST00000017290 SspoQ8CG65 4998 aa1.74□□□□□ -2.13
Brca1-201ENSMUST00000017290 A030003K21RikA0A1Y7VIM3 128 aa1.74□□□□□ -2.13
Brca1-201ENSMUST00000017290 Phgr1Q8K0G7 91 aa1.7□□□□□ -2.14
Brca1-201ENSMUST00000017290 DstQ91ZU6 7393 aaKnown RBP1.67□□□□□ -2.14
Brca1-201ENSMUST00000017290 Gm11568A2A4M2 211 aa1.66□□□□□ -2.14
Brca1-201ENSMUST00000017290 Krtap9-1Q64526 186 aa1.66□□□□□ -2.14
Brca1-201ENSMUST00000017290 Gm11559Q9D3H7 191 aa1.66□□□□□ -2.14
Brca1-201ENSMUST00000017290 Gm6217A0A1Y7VJK9 128 aa1.65□□□□□ -2.14
Brca1-201ENSMUST00000017290 Gm10229O08631 77 aa1.64□□□□□ -2.15
Brca1-201ENSMUST00000017290 1110025L11RikO09048 78 aa1.64□□□□□ -2.15
Brca1-201ENSMUST00000017290 Krtap6-5Q925H3 78 aa1.64□□□□□ -2.15
Brca1-201ENSMUST00000017290 NebE9Q1W3 7152 aa1.64□□□□□ -2.15
Brca1-201ENSMUST00000017290 ObscnA2AAJ9 8891 aaKnown RBP1.59□□□□□ -2.16
Brca1-201ENSMUST00000017290 Muc16A0A140LJ72 8478 aa1.58□□□□□ -2.16
Brca1-201ENSMUST00000017290 Gm11567Q9D141 195 aa1.54□□□□□ -2.16
Brca1-201ENSMUST00000017290 Eppk1Q8R0W0 6548 aa1.52□□□□□ -2.17
Brca1-201ENSMUST00000017290 Gpr98Q8VHN7 6298 aaKnown RBP1.48□□□□□ -2.17
Brca1-201ENSMUST00000017290 A0A286YCP9 139 aa1.45□□□□□ -2.18
Brca1-201ENSMUST00000017290 Muc19Q6PZE0 7524 aa1.45□□□□□ -2.18
Brca1-201ENSMUST00000017290 Gm11639A0A1D5RLM8 5808 aa1.36□□□□□ -2.19
Brca1-201ENSMUST00000017290 Kmt2dQ6PDK2 5588 aa1.35□□□□□ -2.19
Brca1-201ENSMUST00000017290 Gm2431E9Q8S1 172 aa1.27□□□□□ -2.21
Brca1-201ENSMUST00000017290 Gm45618A0A1B0GSA0 219 aa1.25□□□□□ -2.21
Brca1-201ENSMUST00000017290 Krtap6-2O08884 159 aa1.24□□□□□ -2.21
Brca1-201ENSMUST00000017290 Gm39115A0A1B0GSH7 232 aa1.24□□□□□ -2.21
Brca1-201ENSMUST00000017290 Gm29735A0A1B0GT06 219 aa1.19□□□□□ -2.22
Brca1-201ENSMUST00000017290 Gm10153A0A1B0GRL1 320 aa1.14□□□□□ -2.23
Brca1-201ENSMUST00000017290 Hmcn1D3YXG0 5634 aa1.12□□□□□ -2.23
Brca1-201ENSMUST00000017290 Gm45337A0A1B0GS71 263 aa1.11□□□□□ -2.23
Brca1-201ENSMUST00000017290 Krtap5-2Q9D5Z7 189 aa1.1□□□□□ -2.23
Brca1-201ENSMUST00000017290 Krtap21-1Q925H4 128 aa1.08□□□□□ -2.24
Brca1-201ENSMUST00000017290 Krtap5-4Q62220 223 aa1.05□□□□□ -2.24
Brca1-201ENSMUST00000017290 Gm40460A0A1B0GR10 244 aa1.05□□□□□ -2.24
Brca1-201ENSMUST00000017290 Gm7579A0A1B0GRJ4 243 aa1.05□□□□□ -2.24
Brca1-201ENSMUST00000017290 Krtap5-5Q2TA51 241 aa1.05□□□□□ -2.24
Brca1-201ENSMUST00000017290 AhnakE9Q616 5656 aaKnown RBP1.03□□□□□ -2.24
Brca1-201ENSMUST00000017290 Gm4553A0A1B0GSA9 284 aa1.01□□□□□ -2.25
Brca1-201ENSMUST00000017290 Krtap5-1Q64507 230 aa0.84□□□□□ -2.27
Brca1-201ENSMUST00000017290 Gm4559A4IF42 199 aa0.8□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 114.5 ms