RNA–Protein interactions for RNA: YPR163C

TIF3, Transcript of Translation initiation factor eIF-4B, yeast

Gene TIF3, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF3	YPR163C	YER186C	P40101	306 aa		7.93	□□□□□ -1.14
TIF3	YPR163C	MAM33	P40513	266 aa		7.93	□□□□□ -1.14
TIF3	YPR163C	YFL012W	P43580	148 aa		7.93	□□□□□ -1.14
TIF3	YPR163C	SAD1	P43589	448 aa		7.93	□□□□□ -1.14
TIF3	YPR163C	YNL115C	P53925	644 aa		7.93	□□□□□ -1.14
TIF3	YPR163C	AAD4	Q07747	329 aa		7.93	□□□□□ -1.14
TIF3	YPR163C	STB3	Q12427	513 aa		7.93	□□□□□ -1.14
TIF3	YPR163C	ADE4	P04046	510 aa	Known RBP	7.92	□□□□□ -1.14
TIF3	YPR163C	ADE2	P21264	571 aa	Known RBP	7.92	□□□□□ -1.14
TIF3	YPR163C	GAC1	P28006	793 aa		7.92	□□□□□ -1.14
TIF3	YPR163C	HEM12	P32347	362 aa	Predicted RBP	7.92	□□□□□ -1.14
TIF3	YPR163C	BUD2	P33314	1104 aa		7.92	□□□□□ -1.14
TIF3	YPR163C	BRL1	P38770	471 aa		7.92	□□□□□ -1.14
TIF3	YPR163C	YJL132W	P47014	750 aa		7.92	□□□□□ -1.14
TIF3	YPR163C	CDC123	Q05791	360 aa		7.92	□□□□□ -1.14
TIF3	YPR163C	RSA3	Q05942	220 aa	Known RBP	7.92	□□□□□ -1.14
TIF3	YPR163C	RSC2	Q06488	889 aa		7.92	□□□□□ -1.14
TIF3	YPR163C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.92	□□□□□ -1.14	not detected
TIF3	YPR163C	TMA46	Q12000	345 aa	Known RBP	7.92	□□□□□ -1.14
TIF3	YPR163C	LDB17	Q12342	491 aa		7.92	□□□□□ -1.14
TIF3	YPR163C	STE6	P12866	1290 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	HSC82	P15108	705 aa	Known RBP	7.91	□□□□□ -1.14
TIF3	YPR163C	MSH2	P25847	964 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	ZIP1	P31111	875 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	TFC1	P32367	649 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	UTR2	P32623	467 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	SLA2	P33338	968 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	HSP78	P33416	811 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	GIP1	P38229	639 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	NMD3	P38861	518 aa	Known RBP	7.91	□□□□□ -1.14
TIF3	YPR163C	SEC31	P38968	1273 aa	Known RBP	7.91	□□□□□ -1.14
TIF3	YPR163C	BEM4	P39011	633 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	PRM9	P39551	298 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	YAT2	P40017	923 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	SCS2	P40075	244 aa	Known RBP	7.91	□□□□□ -1.14
TIF3	YPR163C	SEC28	P40509	296 aa	Known RBP	7.91	□□□□□ -1.14
TIF3	YPR163C	CUS2	P53830	285 aa	Predicted RBP	7.91	□□□□□ -1.14
TIF3	YPR163C	INA17	Q02888	182 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	RLI1	Q03195	608 aa	Known RBP	7.91	□□□□□ -1.14
TIF3	YPR163C	YET2	Q04210	160 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	JIP5	Q06214	492 aa	Predicted RBP	7.91	□□□□□ -1.14
TIF3	YPR163C	ATG26	Q06321	1198 aa		7.91	□□□□□ -1.14
TIF3	YPR163C	DNL4	Q08387	944 aa	Predicted RBP	7.91	□□□□□ -1.14
TIF3	YPR163C	CHS5	Q12114	671 aa	Known RBP	7.91	□□□□□ -1.14
TIF3	YPR163C	YPR089W	O13585	888 aa		7.9	□□□□□ -1.14
TIF3	YPR163C	CAR1	P00812	333 aa	Known RBP	7.9	□□□□□ -1.14
TIF3	YPR163C	RHO2	P06781	192 aa		7.9	□□□□□ -1.14
TIF3	YPR163C	GFD2	P25370	566 aa	Known RBP	7.9	□□□□□ -1.14
TIF3	YPR163C	PMI40	P29952	429 aa	Known RBP	7.9	□□□□□ -1.14
TIF3	YPR163C	SMI1	P32566	505 aa		7.9	□□□□□ -1.14
TIF3	YPR163C	POA1	P38218	177 aa		7.9	□□□□□ -1.14
TIF3	YPR163C	YBR259W	P38338	688 aa		7.9	□□□□□ -1.14
TIF3	YPR163C	PPE1	P38796	400 aa		7.9	□□□□□ -1.14
TIF3	YPR163C	MEF2	P39677	819 aa		7.9	□□□□□ -1.14
TIF3	YPR163C	INP51	P40559	946 aa	Known RBP	7.9	□□□□□ -1.14
TIF3	YPR163C	SPO74	P45819	413 aa		7.9	□□□□□ -1.14
TIF3	YPR163C	YNL134C	P53912	376 aa	Known RBP	7.9	□□□□□ -1.14
TIF3	YPR163C	HPT1	Q04178	221 aa	Known RBP	7.9	□□□□□ -1.14
TIF3	YPR163C	APC9	Q12107	265 aa		7.9	□□□□□ -1.14
TIF3	YPR163C	TYR1	P20049	452 aa		7.89	□□□□□ -1.15
TIF3	YPR163C	SEC15	P22224	910 aa		7.89	□□□□□ -1.15
TIF3	YPR163C	MEF1	P25039	761 aa		7.89	□□□□□ -1.15
TIF3	YPR163C	FUB1	P25659	250 aa		7.89	□□□□□ -1.15
TIF3	YPR163C	GCD11	P32481	527 aa	Known RBP	7.89	□□□□□ -1.15
TIF3	YPR163C	BEM3	P32873	1128 aa		7.89	□□□□□ -1.15
TIF3	YPR163C	TVP23	P38962	199 aa		7.89	□□□□□ -1.15
TIF3	YPR163C	STB4	P50104	949 aa		7.89	□□□□□ -1.15
TIF3	YPR163C	ALT2	P52892	507 aa		7.89	□□□□□ -1.15
TIF3	YPR163C	YGL108C	P53139	140 aa		7.89	□□□□□ -1.15
TIF3	YPR163C	DOS2	P54858	310 aa		7.89	□□□□□ -1.15
TIF3	YPR163C	SLG1	P54867	378 aa		7.89	□□□□□ -1.15
TIF3	YPR163C	SPC2	Q04969	178 aa		7.89	□□□□□ -1.15
TIF3	YPR163C	YMR030W-A	Q3E760	96 aa		7.89	□□□□□ -1.15
TIF3	YPR163C	UBR2	Q07963	1872 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	COX6	P00427	148 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	INO1	P11986	533 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	SEC63	P14906	663 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	ATP12	P22135	325 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	SAN1	P22470	610 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	CAD1	P24813	409 aa	Known RBP	7.88	□□□□□ -1.15
TIF3	YPR163C	DAL1	P32375	460 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	SPT16	P32558	1035 aa	Known RBP	7.88	□□□□□ -1.15
TIF3	YPR163C	ATG12	P38316	186 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	SRP68	P38687	599 aa	Known RBP	7.88	□□□□□ -1.15
TIF3	YPR163C	YHR182W	P38870	785 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	IAH1	P41734	238 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	SET2	P46995	733 aa	Known RBP	7.88	□□□□□ -1.15
TIF3	YPR163C	CCT8	P47079	568 aa	Known RBP	7.88	□□□□□ -1.15
TIF3	YPR163C	TAN1	P53072	289 aa	Predicted RBP	7.88	□□□□□ -1.15
TIF3	YPR163C	BUD32	P53323	261 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	KTR6	P54070	446 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	PRO2	P54885	456 aa	Known RBP	7.88	□□□□□ -1.15
TIF3	YPR163C	RNY1	Q02933	434 aa	Known RBP	7.88	□□□□□ -1.15
TIF3	YPR163C	RCL1	Q08096	367 aa	Predicted RBP	7.88	□□□□□ -1.15
TIF3	YPR163C	MCH5	Q08777	521 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	DDC1	Q08949	612 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	YEL077C	Q3E7X8	1277 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	YDR034W-B	Q6Q5X2	51 aa		7.88	□□□□□ -1.15
TIF3	YPR163C	HSH49	Q99181	213 aa	Predicted RBP	7.88	□□□□□ -1.15
TIF3	YPR163C	NMT1	P14743	455 aa		7.87	□□□□□ -1.15

Retrieved 100 of 5,963 RNA–protein pairs in 53 ms