RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	THI73	Q07904	523 aa		3.55	□□□□□ -1.84
RSA1	YPL193W	ADR1	P07248	1323 aa		3.54	□□□□□ -1.84
RSA1	YPL193W	SEC18	P18759	758 aa	Known RBP	3.54	□□□□□ -1.84
RSA1	YPL193W	YIL169C	P40442	995 aa		3.54	□□□□□ -1.84
RSA1	YPL193W	MDR1	P53258	950 aa		3.54	□□□□□ -1.84
RSA1	YPL193W	NGL1	Q08213	363 aa	Known RBP	3.54	□□□□□ -1.84
RSA1	YPL193W	APM4	Q99186	491 aa		3.54	□□□□□ -1.84
RSA1	YPL193W	SDH8	P38345	138 aa		3.53	□□□□□ -1.84
RSA1	YPL193W	ECM22	Q05958	814 aa	Predicted RBP	3.53	□□□□□ -1.84
RSA1	YPL193W	YTM1	Q12024	460 aa	Predicted RBP	3.53	□□□□□ -1.84
RSA1	YPL193W	NUP188	P52593	1655 aa	Known RBP	3.52	□□□□□ -1.85
RSA1	YPL193W	AMD2	P22580	549 aa		3.52	□□□□□ -1.85
RSA1	YPL193W	SAP1	P39955	897 aa	Known RBP	3.52	□□□□□ -1.85
RSA1	YPL193W	MNN11	P46985	422 aa	Known RBP	3.52	□□□□□ -1.85
RSA1	YPL193W	YPT11	P48559	417 aa		3.52	□□□□□ -1.85
RSA1	YPL193W	PEF1	P53238	335 aa		3.52	□□□□□ -1.85
RSA1	YPL193W	YML053C	Q04978	212 aa		3.52	□□□□□ -1.85
RSA1	YPL193W	MLH2	Q07980	695 aa		3.52	□□□□□ -1.85
RSA1	YPL193W	TY1B-NL2	Q99337	1749 aa	Known RBP	3.52	□□□□□ -1.85
RSA1	YPL193W	YBT1	P32386	1661 aa		3.52	□□□□□ -1.85
RSA1	YPL193W	IML1	P47170	1584 aa		3.51	□□□□□ -1.85
RSA1	YPL193W	AEP2	P22136	580 aa		3.51	□□□□□ -1.85
RSA1	YPL193W	DID4	P36108	232 aa		3.51	□□□□□ -1.85
RSA1	YPL193W	RAD26	P40352	1085 aa		3.51	□□□□□ -1.85
RSA1	YPL193W	SAD1	P43589	448 aa		3.51	□□□□□ -1.85
RSA1	YPL193W	DNM1	P54861	757 aa		3.51	□□□□□ -1.85
RSA1	YPL193W	PLM2	Q04383	521 aa		3.51	□□□□□ -1.85
RSA1	YPL193W	GET3	Q12154	354 aa	Known RBP	3.51	□□□□□ -1.85
RSA1	YPL193W	RRI1	Q12468	440 aa		3.51	□□□□□ -1.85
RSA1	YPL193W	ATP12	P22135	325 aa		3.5	□□□□□ -1.85
RSA1	YPL193W	FMP46	P36141	133 aa	Known RBP	3.5	□□□□□ -1.85
RSA1	YPL193W	TOM71	P38825	639 aa	Known RBP	3.5	□□□□□ -1.85
RSA1	YPL193W	ERV46	P39727	415 aa		3.5	□□□□□ -1.85
RSA1	YPL193W	PEA2	P40091	420 aa		3.5	□□□□□ -1.85
RSA1	YPL193W	LAS21	P40367	830 aa		3.5	□□□□□ -1.85
RSA1	YPL193W	DIG1	Q03063	452 aa	Known RBP	3.5	□□□□□ -1.85
RSA1	YPL193W	RAD34	Q06665	692 aa		3.5	□□□□□ -1.85
RSA1	YPL193W	LYS21	Q12122	440 aa	Known RBP	3.5	□□□□□ -1.85
RSA1	YPL193W	Q0010	Q9ZZX9	128 aa		3.5	□□□□□ -1.85
RSA1	YPL193W	CHO2	P05374	869 aa	Known RBP	3.49	□□□□□ -1.85
RSA1	YPL193W	STB5	P38699	743 aa		3.49	□□□□□ -1.85
RSA1	YPL193W	RTT107	P38850	1070 aa		3.49	□□□□□ -1.85
RSA1	YPL193W	RNR4	P49723	345 aa	Known RBP	3.49	□□□□□ -1.85
RSA1	YPL193W	YNL144C	P53907	740 aa		3.49	□□□□□ -1.85
RSA1	YPL193W	VTC3	Q02725	835 aa		3.49	□□□□□ -1.85
RSA1	YPL193W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.49	□□□□□ -1.85	not detected
RSA1	YPL193W	RPL42A	P0CX27	106 aa	Known RBP	3.48	□□□□□ -1.85
RSA1	YPL193W	RPL42B	P0CX28	106 aa	Known RBP	3.48	□□□□□ -1.85
RSA1	YPL193W	CBP3	P21560	335 aa		3.48	□□□□□ -1.85
RSA1	YPL193W	CNA1	P23287	553 aa		3.48	□□□□□ -1.85
RSA1	YPL193W	PLC1	P32383	869 aa		3.48	□□□□□ -1.85
RSA1	YPL193W	PPG1	P32838	368 aa		3.48	□□□□□ -1.85
RSA1	YPL193W	KES1	P35844	434 aa	Known RBP	3.48	□□□□□ -1.85
RSA1	YPL193W	MAM1	P40065	302 aa		3.48	□□□□□ -1.85
RSA1	YPL193W	ARA2	Q04212	335 aa		3.48	□□□□□ -1.85
RSA1	YPL193W	YMR317W	Q04893	1140 aa		3.48	□□□□□ -1.85
RSA1	YPL193W	HAP1	P0CE41	1502 aa		3.48	□□□□□ -1.85
RSA1	YPL193W	SER1	P33330	395 aa	Known RBP	3.47	□□□□□ -1.85
RSA1	YPL193W	VPS8	P39702	1274 aa		3.47	□□□□□ -1.85
RSA1	YPL193W	VRG4	P40107	337 aa		3.47	□□□□□ -1.85
RSA1	YPL193W	COS12	P53053	380 aa		3.47	□□□□□ -1.85
RSA1	YPL193W	ALG12	P53730	551 aa		3.47	□□□□□ -1.85
RSA1	YPL193W	LCB4	Q12246	624 aa		3.47	□□□□□ -1.85
RSA1	YPL193W	ARG1	P22768	420 aa		3.46	□□□□□ -1.86
RSA1	YPL193W	CWH43	P25618	953 aa		3.46	□□□□□ -1.86
RSA1	YPL193W	DAL3	P32459	195 aa		3.46	□□□□□ -1.86
RSA1	YPL193W	SDS24	P38314	527 aa		3.46	□□□□□ -1.86
RSA1	YPL193W	LNP1	P38878	278 aa		3.46	□□□□□ -1.86
RSA1	YPL193W	RRP8	P38961	392 aa	Known RBP	3.46	□□□□□ -1.86
RSA1	YPL193W	HOS2	P53096	452 aa	Predicted RBP	3.46	□□□□□ -1.86
RSA1	YPL193W	UME1	Q03010	460 aa		3.46	□□□□□ -1.86
RSA1	YPL193W	GSH2	Q08220	491 aa		3.46	□□□□□ -1.86
RSA1	YPL193W	YMR230W-A	Q3E7B5	62 aa		3.46	□□□□□ -1.86
RSA1	YPL193W	YDL242W	Q07746	117 aa		3.45	□□□□□ -1.86
RSA1	YPL193W	YOR378W	Q08902	515 aa		3.45	□□□□□ -1.86
RSA1	YPL193W	NUP145	P49687	1317 aa		3.44	□□□□□ -1.86
RSA1	YPL193W	CAT8	P39113	1433 aa		3.44	□□□□□ -1.86
RSA1	YPL193W	VMR1	P38735	1592 aa		3.44	□□□□□ -1.86
RSA1	YPL193W	YFL068W	P0CX99	160 aa		3.44	□□□□□ -1.86
RSA1	YPL193W	YLL066W-A	P0CY00	160 aa		3.44	□□□□□ -1.86
RSA1	YPL193W	YLL067W-A	P0CY01	160 aa		3.44	□□□□□ -1.86
RSA1	YPL193W	PPZ1	P26570	692 aa		3.44	□□□□□ -1.86
RSA1	YPL193W	YOX1	P34161	385 aa		3.44	□□□□□ -1.86
RSA1	YPL193W	RRP14	P36080	434 aa	Known RBP	3.44	□□□□□ -1.86
RSA1	YPL193W	SRP68	P38687	599 aa	Known RBP	3.44	□□□□□ -1.86
RSA1	YPL193W	NOP2	P40991	618 aa	Known RBP	3.44	□□□□□ -1.86
RSA1	YPL193W	YJL107C	P42947	387 aa		3.44	□□□□□ -1.86
RSA1	YPL193W	ORC5	P50874	479 aa		3.44	□□□□□ -1.86
RSA1	YPL193W	ACS1	Q01574	713 aa		3.44	□□□□□ -1.86
RSA1	YPL193W	ECM16	Q04217	1267 aa	Known RBP	3.44	□□□□□ -1.86
RSA1	YPL193W	RTT103	Q05543	409 aa		3.44	□□□□□ -1.86
RSA1	YPL193W	FPR4	Q06205	392 aa	Predicted RBP	3.44	□□□□□ -1.86
RSA1	YPL193W	VPS5	Q92331	675 aa		3.44	□□□□□ -1.86
RSA1	YPL193W	DED81	P38707	554 aa	Known RBP	3.43	□□□□□ -1.86
RSA1	YPL193W	ARO9	P38840	513 aa	Predicted RBP	3.43	□□□□□ -1.86
RSA1	YPL193W	GPP1	P41277	250 aa	Known RBP	3.43	□□□□□ -1.86
RSA1	YPL193W	RNH70	P53331	553 aa		3.43	□□□□□ -1.86
RSA1	YPL193W	YER175W-A	Q8TGU4	54 aa		3.43	□□□□□ -1.86
RSA1	YPL193W	IRC5	P43610	853 aa		3.42	□□□□□ -1.86
RSA1	YPL193W	BET4	Q00618	327 aa		3.42	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms