RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C CET1O13297 549 aaPredicted RBP1.86□□□□□ -2.11
NIP100YPL174C COX1P00401 534 aa1.86□□□□□ -2.11
NIP100YPL174C IMD2P38697 523 aaKnown RBP1.86□□□□□ -2.11
NIP100YPL174C YLF2P38746 405 aa1.86□□□□□ -2.11
NIP100YPL174C YAT2P40017 923 aa1.86□□□□□ -2.11
NIP100YPL174C IMD3P50095 523 aaKnown RBP1.86□□□□□ -2.11
NIP100YPL174C UBP8P50102 471 aa1.86□□□□□ -2.11
NIP100YPL174C YAT1P80235 687 aa1.86□□□□□ -2.11
NIP100YPL174C NUP53Q03790 475 aa1.86□□□□□ -2.11
NIP100YPL174C AAD4Q07747 329 aa1.86□□□□□ -2.11
NIP100YPL174C YPL191CQ08930 360 aa1.86□□□□□ -2.11
NIP100YPL174C UBX3Q12229 455 aa1.86□□□□□ -2.11
NIP100YPL174C ARP7Q12406 477 aa1.86□□□□□ -2.11
NIP100YPL174C MSH1P25846 959 aa1.85□□□□□ -2.11
NIP100YPL174C ATO2P32907 282 aa1.85□□□□□ -2.11
NIP100YPL174C NUP120P35729 1037 aa1.85□□□□□ -2.11
NIP100YPL174C KES1P35844 434 aaKnown RBP1.85□□□□□ -2.11
NIP100YPL174C IMA5P40884 581 aa1.85□□□□□ -2.11
NIP100YPL174C CIN1P40987 1014 aa1.85□□□□□ -2.11
NIP100YPL174C CNM67P53865 581 aaKnown RBP1.85□□□□□ -2.11
NIP100YPL174C SND1Q04007 877 aa1.85□□□□□ -2.11
NIP100YPL174C LEA1Q08963 238 aaPredicted RBP1.85□□□□□ -2.11
NIP100YPL174C LYS21Q12122 440 aaKnown RBP1.85□□□□□ -2.11
NIP100YPL174C TIP41Q12199 356 aa1.85□□□□□ -2.11
NIP100YPL174C MIS1P09440 975 aaKnown RBP1.85□□□□□ -2.11
NIP100YPL174C PTC6P25646 442 aa1.85□□□□□ -2.11
NIP100YPL174C GCS1P35197 352 aa1.85□□□□□ -2.11
NIP100YPL174C NOP2P40991 618 aaKnown RBP1.85□□□□□ -2.11
NIP100YPL174C POL31P46957 487 aa1.85□□□□□ -2.11
NIP100YPL174C YNL234WP53857 426 aa1.85□□□□□ -2.11
NIP100YPL174C TDA9Q04545 1251 aa1.85□□□□□ -2.11
NIP100YPL174C POL3P15436 1097 aa1.84□□□□□ -2.11
NIP100YPL174C RIT1P23796 513 aa1.84□□□□□ -2.11
NIP100YPL174C MRPL36P36531 177 aa1.84□□□□□ -2.11
NIP100YPL174C STV1P37296 890 aa1.84□□□□□ -2.11
NIP100YPL174C ERC1P38767 581 aa1.84□□□□□ -2.11
NIP100YPL174C MAD3P47074 515 aa1.84□□□□□ -2.11
NIP100YPL174C GRS2Q06817 618 aa1.84□□□□□ -2.11
NIP100YPL174C SES1P07284 462 aaKnown RBP1.84□□□□□ -2.12
NIP100YPL174C MRP2P10663 115 aaPredicted RBP1.84□□□□□ -2.12
NIP100YPL174C PHO81P17442 1178 aa1.84□□□□□ -2.12
NIP100YPL174C PXL1P36166 706 aa1.84□□□□□ -2.12
NIP100YPL174C APM3P38153 483 aa1.84□□□□□ -2.12
NIP100YPL174C YIL161WP40449 235 aaKnown RBP1.84□□□□□ -2.12
NIP100YPL174C TEP1P53916 434 aa1.84□□□□□ -2.12
NIP100YPL174C YDR415CQ04033 374 aaPredicted RBP1.84□□□□□ -2.12
NIP100YPL174C YMR034CQ05131 434 aaPredicted RBP1.84□□□□□ -2.12
NIP100YPL174C MCH4Q08268 501 aa1.84□□□□□ -2.12
NIP100YPL174C PET122P10355 254 aa1.83□□□□□ -2.12
NIP100YPL174C YCR006CP25350 157 aa1.83□□□□□ -2.12
NIP100YPL174C RAD16P31244 790 aa1.83□□□□□ -2.12
NIP100YPL174C TOM71P38825 639 aaKnown RBP1.83□□□□□ -2.12
NIP100YPL174C ASG1P40467 964 aa1.83□□□□□ -2.12
NIP100YPL174C YPL068CQ02749 293 aa1.83□□□□□ -2.12
NIP100YPL174C FCP1Q03254 732 aa1.83□□□□□ -2.12
NIP100YPL174C RAD34Q06665 692 aa1.83□□□□□ -2.12
NIP100YPL174C SST2P11972 698 aaKnown RBP1.83□□□□□ -2.12
NIP100YPL174C YIL169CP40442 995 aa1.83□□□□□ -2.12
NIP100YPL174C YGL036WP53185 909 aaPredicted RBP1.83□□□□□ -2.12
NIP100YPL174C PFA5Q03289 374 aa1.83□□□□□ -2.12
NIP100YPL174C ICL2Q12031 575 aa1.83□□□□□ -2.12
NIP100YPL174C GET3Q12154 354 aaKnown RBP1.83□□□□□ -2.12
NIP100YPL174C YOL114CQ12322 202 aa1.83□□□□□ -2.12
NIP100YPL174C LHS1P36016 881 aa1.82□□□□□ -2.12
NIP100YPL174C GND1P38720 489 aaKnown RBP1.82□□□□□ -2.12
NIP100YPL174C ERV46P39727 415 aa1.82□□□□□ -2.12
NIP100YPL174C NPA3P47122 385 aa1.82□□□□□ -2.12
NIP100YPL174C LYS20P48570 428 aaKnown RBP1.82□□□□□ -2.12
NIP100YPL174C MTG1Q03151 367 aaPredicted RBP1.82□□□□□ -2.12
NIP100YPL174C IZH1Q03419 316 aa1.82□□□□□ -2.12
NIP100YPL174C GSH2Q08220 491 aa1.82□□□□□ -2.12
NIP100YPL174C ATX2Q12067 313 aa1.82□□□□□ -2.12
NIP100YPL174C YBR255C-AQ3E776 120 aa1.82□□□□□ -2.12
NIP100YPL174C CNA1P23287 553 aa1.82□□□□□ -2.12
NIP100YPL174C PAF1P38351 445 aa1.82□□□□□ -2.12
NIP100YPL174C ARN1P38731 627 aa1.82□□□□□ -2.12
NIP100YPL174C MET30P39014 640 aa1.82□□□□□ -2.12
NIP100YPL174C VTC3Q02725 835 aa1.82□□□□□ -2.12
NIP100YPL174C DIG1Q03063 452 aaKnown RBP1.82□□□□□ -2.12
NIP100YPL174C MCP2Q06567 569 aa1.82□□□□□ -2.12
NIP100YPL174C GAL4P04386 881 aa1.81□□□□□ -2.12
NIP100YPL174C RPL42AP0CX27 106 aaKnown RBP1.81□□□□□ -2.12
NIP100YPL174C RPL42BP0CX28 106 aaKnown RBP1.81□□□□□ -2.12
NIP100YPL174C YUR1P26725 428 aa1.81□□□□□ -2.12
NIP100YPL174C ENP1P38333 483 aaKnown RBP1.81□□□□□ -2.12
NIP100YPL174C YGL260WP53056 76 aa1.81□□□□□ -2.12
NIP100YPL174C AIM6Q07716 390 aa1.81□□□□□ -2.12
NIP100YPL174C CIR2Q08822 631 aa1.81□□□□□ -2.12
NIP100YPL174C ADE3P07245 946 aaKnown RBP1.81□□□□□ -2.12
NIP100YPL174C PFK2P16862 959 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
NIP100YPL174C KGD2P19262 463 aaPredicted RBP1.81□□□□□ -2.12
NIP100YPL174C AIM17P23180 465 aaKnown RBP1.81□□□□□ -2.12
NIP100YPL174C SWI4P25302 1093 aaKnown RBP1.81□□□□□ -2.12
NIP100YPL174C ARC40P38328 384 aaKnown RBP1.81□□□□□ -2.12
NIP100YPL174C VPS8P39702 1274 aa1.81□□□□□ -2.12
NIP100YPL174C HIS6P40545 261 aa1.81□□□□□ -2.12
NIP100YPL174C MAF1P41910 395 aa1.81□□□□□ -2.12
NIP100YPL174C CLB4P24871 460 aa1.8□□□□□ -2.12
NIP100YPL174C ARP2P32381 391 aaKnown RBP1.8□□□□□ -2.12
NIP100YPL174C GSH1P32477 678 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms