RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W AIM6Q07716 390 aa3.25□□□□□ -1.89
UBP16YPL072W AAD4Q07747 329 aa3.25□□□□□ -1.89
UBP16YPL072W BUD7Q08754 746 aa3.25□□□□□ -1.89
UBP16YPL072W PFA4Q12006 378 aa3.25□□□□□ -1.89
UBP16YPL072W YBR255C-AQ3E776 120 aa3.25□□□□□ -1.89
UBP16YPL072W ERC1P38767 581 aa3.24□□□□□ -1.89
UBP16YPL072W SWD1P39706 426 aa3.24□□□□□ -1.89
UBP16YPL072W TPM2P40414 161 aa3.24□□□□□ -1.89
UBP16YPL072W UBP7P40453 1071 aa3.24□□□□□ -1.89
UBP16YPL072W YIR016WP40572 265 aa3.24□□□□□ -1.89
UBP16YPL072W YJL107CP42947 387 aa3.24□□□□□ -1.89
UBP16YPL072W ORC5P50874 479 aa3.24□□□□□ -1.89
UBP16YPL072W FOL1P53848 824 aa3.24□□□□□ -1.89
UBP16YPL072W YNL034WP53963 612 aa3.24□□□□□ -1.89
UBP16YPL072W SNA4Q07549 140 aa3.24□□□□□ -1.89
UBP16YPL072W UBX3Q12229 455 aa3.24□□□□□ -1.89
UBP16YPL072W ILV2P07342 687 aaKnown RBP3.24□□□□□ -1.89
UBP16YPL072W SEC18P18759 758 aaKnown RBP3.24□□□□□ -1.89
UBP16YPL072W PDE1P22434 369 aa3.24□□□□□ -1.89
UBP16YPL072W CNA1P23287 553 aa3.24□□□□□ -1.89
UBP16YPL072W PTC6P25646 442 aa3.24□□□□□ -1.89
UBP16YPL072W SWC3P31376 625 aa3.24□□□□□ -1.89
UBP16YPL072W SIP1P32578 815 aa3.24□□□□□ -1.89
UBP16YPL072W GND1P38720 489 aaKnown RBP3.24□□□□□ -1.89
UBP16YPL072W BOP3P53958 396 aa3.24□□□□□ -1.89
UBP16YPL072W NEW1Q08972 1196 aaKnown RBP3.24□□□□□ -1.89
UBP16YPL072W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
UBP16YPL072W RRI1Q12468 440 aa3.24□□□□□ -1.89
UBP16YPL072W RGT1P32862 1170 aa3.23□□□□□ -1.89
UBP16YPL072W ARN1P38731 627 aa3.23□□□□□ -1.89
UBP16YPL072W YIL152WP40455 235 aa3.23□□□□□ -1.89
UBP16YPL072W ASK10P48361 1146 aa3.23□□□□□ -1.89
UBP16YPL072W ESF2P53743 316 aaKnown RBP3.23□□□□□ -1.89
UBP16YPL072W LEA1Q08963 238 aaPredicted RBP3.23□□□□□ -1.89
UBP16YPL072W GCS1P35197 352 aa3.22□□□□□ -1.89
UBP16YPL072W SCO2P38072 301 aa3.22□□□□□ -1.89
UBP16YPL072W NPA3P47122 385 aa3.22□□□□□ -1.89
UBP16YPL072W THI3Q07471 609 aa3.22□□□□□ -1.89
UBP16YPL072W ARP7Q12406 477 aa3.22□□□□□ -1.89
UBP16YPL072W TMA7Q3E764 64 aaKnown RBP3.22□□□□□ -1.89
UBP16YPL072W YPT11P48559 417 aa3.21□□□□□ -1.9
UBP16YPL072W ECM22Q05958 814 aaPredicted RBP3.21□□□□□ -1.9
UBP16YPL072W DSE3Q08729 430 aa3.21□□□□□ -1.9
UBP16YPL072W NYV1Q12255 253 aa3.21□□□□□ -1.9
UBP16YPL072W LAC1P28496 418 aa3.2□□□□□ -1.9
UBP16YPL072W MSS51P32335 436 aa3.2□□□□□ -1.9
UBP16YPL072W FRD1P32614 470 aaKnown RBP3.2□□□□□ -1.9
UBP16YPL072W TPA1P40032 644 aaKnown RBP3.2□□□□□ -1.9
UBP16YPL072W YRB30P53107 440 aaPredicted RBP3.2□□□□□ -1.9
UBP16YPL072W CEG1Q01159 459 aaPredicted RBP3.2□□□□□ -1.9
UBP16YPL072W VPS72Q03388 795 aa3.2□□□□□ -1.9
UBP16YPL072W VMS1Q04311 632 aaKnown RBP3.2□□□□□ -1.9
UBP16YPL072W DPB3P27344 201 aa3.19□□□□□ -1.9
UBP16YPL072W HES1P35843 434 aa3.19□□□□□ -1.9
UBP16YPL072W YAT2P40017 923 aa3.19□□□□□ -1.9
UBP16YPL072W CDC1P40986 491 aa3.19□□□□□ -1.9
UBP16YPL072W YPR003CP53394 754 aa3.19□□□□□ -1.9
UBP16YPL072W YNL144CP53907 740 aa3.19□□□□□ -1.9
UBP16YPL072W MLH2Q07980 695 aa3.19□□□□□ -1.9
UBP16YPL072W ICL2Q12031 575 aa3.19□□□□□ -1.9
UBP16YPL072W COX1P00401 534 aa3.19□□□□□ -1.9
UBP16YPL072W YEF3P16521 1044 aaKnown RBP3.19□□□□□ -1.9
UBP16YPL072W YCR043CP25361 127 aa3.19□□□□□ -1.9
UBP16YPL072W NIC96P34077 839 aa3.19□□□□□ -1.9
UBP16YPL072W OCT1P35999 772 aa3.19□□□□□ -1.9
UBP16YPL072W ARC40P38328 384 aaKnown RBP3.19□□□□□ -1.9
UBP16YPL072W TES1P41903 349 aaKnown RBP3.19□□□□□ -1.9
UBP16YPL072W PEX8P53248 589 aa3.19□□□□□ -1.9
UBP16YPL072W YPL108WQ02872 168 aaPredicted RBP3.19□□□□□ -1.9
UBP16YPL072W PDR8Q06149 701 aa3.19□□□□□ -1.9
UBP16YPL072W GSH2Q08220 491 aa3.19□□□□□ -1.9
UBP16YPL072W NDD1Q08887 554 aa3.19□□□□□ -1.9
UBP16YPL072W STT3P39007 718 aaKnown RBP3.18□□□□□ -1.9
UBP16YPL072W FUN12P39730 1002 aaKnown RBP3.18□□□□□ -1.9
UBP16YPL072W MAF1P41910 395 aa3.18□□□□□ -1.9
UBP16YPL072W MAD3P47074 515 aa3.18□□□□□ -1.9
UBP16YPL072W EAF7P53911 425 aaKnown RBP3.18□□□□□ -1.9
UBP16YPL072W SND1Q04007 877 aa3.18□□□□□ -1.9
UBP16YPL072W YFL068WP0CX99 160 aa3.17□□□□□ -1.9
UBP16YPL072W YLL066W-AP0CY00 160 aa3.17□□□□□ -1.9
UBP16YPL072W YLL067W-AP0CY01 160 aa3.17□□□□□ -1.9
UBP16YPL072W SIR1P21691 654 aa3.17□□□□□ -1.9
UBP16YPL072W VPS41P38959 992 aa3.17□□□□□ -1.9
UBP16YPL072W CCT4P39078 528 aaKnown RBP3.17□□□□□ -1.9
UBP16YPL072W UBX6P47049 396 aa3.17□□□□□ -1.9
UBP16YPL072W TAN1P53072 289 aaPredicted RBP3.17□□□□□ -1.9
UBP16YPL072W YGR079WP53249 370 aa3.17□□□□□ -1.9
UBP16YPL072W TGL2P54857 326 aa3.17□□□□□ -1.9
UBP16YPL072W GTB1Q04924 702 aa3.17□□□□□ -1.9
UBP16YPL072W YMR034CQ05131 434 aaPredicted RBP3.17□□□□□ -1.9
UBP16YPL072W PIG1Q06216 648 aa3.17□□□□□ -1.9
UBP16YPL072W GRS2Q06817 618 aa3.17□□□□□ -1.9
UBP16YPL072W RVB2Q12464 471 aaKnown RBP3.17□□□□□ -1.9
UBP16YPL072W YOR111WQ99210 232 aa3.17□□□□□ -1.9
UBP16YPL072W ATP4P05626 244 aa3.16□□□□□ -1.9
UBP16YPL072W PWP2P25635 923 aaKnown RBP3.16□□□□□ -1.9
UBP16YPL072W NAB3P38996 802 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
UBP16YPL072W PHM8P40025 321 aa3.16□□□□□ -1.9
UBP16YPL072W CAB2P40506 365 aa3.16□□□□□ -1.9
UBP16YPL072W MCH4Q08268 501 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms