RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W YBR255C-AQ3E776 120 aa3.34□□□□□ -1.87
BER1YLR412W PTC6P25646 442 aa3.33□□□□□ -1.88
BER1YLR412W MGM1P32266 881 aa3.33□□□□□ -1.88
BER1YLR412W FRD1P32614 470 aaKnown RBP3.33□□□□□ -1.88
BER1YLR412W UBP7P40453 1071 aa3.33□□□□□ -1.88
BER1YLR412W MRPL1Q04599 285 aa3.33□□□□□ -1.88
BER1YLR412W COX1P00401 534 aa3.32□□□□□ -1.88
BER1YLR412W SST2P11972 698 aaKnown RBP3.32□□□□□ -1.88
BER1YLR412W SWC3P31376 625 aa3.32□□□□□ -1.88
BER1YLR412W CAB2P40506 365 aa3.32□□□□□ -1.88
BER1YLR412W TEP1P53916 434 aa3.32□□□□□ -1.88
BER1YLR412W RPL15BP54780 204 aaPredicted RBP3.32□□□□□ -1.88
BER1YLR412W LEA1Q08963 238 aaPredicted RBP3.32□□□□□ -1.88
BER1YLR412W GET3Q12154 354 aaKnown RBP3.32□□□□□ -1.88
BER1YLR412W SEC18P18759 758 aaKnown RBP3.31□□□□□ -1.88
BER1YLR412W SIR1P21691 654 aa3.31□□□□□ -1.88
BER1YLR412W TOM20P35180 183 aa3.31□□□□□ -1.88
BER1YLR412W APM3P38153 483 aa3.31□□□□□ -1.88
BER1YLR412W ORC5P50874 479 aa3.31□□□□□ -1.88
BER1YLR412W YGR079WP53249 370 aa3.31□□□□□ -1.88
BER1YLR412W YPR003CP53394 754 aa3.31□□□□□ -1.88
BER1YLR412W MOT3P54785 490 aaKnown RBP3.31□□□□□ -1.88
BER1YLR412W YPL108WQ02872 168 aaPredicted RBP3.31□□□□□ -1.88
BER1YLR412W HIM1Q06674 414 aa3.31□□□□□ -1.88
BER1YLR412W ADE3P07245 946 aaKnown RBP3.3□□□□□ -1.88
BER1YLR412W POL3P15436 1097 aa3.3□□□□□ -1.88
BER1YLR412W AIM17P23180 465 aaKnown RBP3.3□□□□□ -1.88
BER1YLR412W RIT1P23796 513 aa3.3□□□□□ -1.88
BER1YLR412W SWI4P25302 1093 aaKnown RBP3.3□□□□□ -1.88
BER1YLR412W YCP4P25349 247 aaKnown RBP3.3□□□□□ -1.88
BER1YLR412W LAC1P28496 418 aa3.3□□□□□ -1.88
BER1YLR412W YKL133CP36066 463 aa3.3□□□□□ -1.88
BER1YLR412W PXL1P36166 706 aa3.3□□□□□ -1.88
BER1YLR412W GRX7P38068 203 aa3.3□□□□□ -1.88
BER1YLR412W SCO2P38072 301 aa3.3□□□□□ -1.88
BER1YLR412W FUN12P39730 1002 aaKnown RBP3.3□□□□□ -1.88
BER1YLR412W HIS6P40545 261 aa3.3□□□□□ -1.88
BER1YLR412W MEP2P41948 499 aa3.3□□□□□ -1.88
BER1YLR412W YJL107CP42947 387 aa3.3□□□□□ -1.88
BER1YLR412W UBX6P47049 396 aa3.3□□□□□ -1.88
BER1YLR412W MET14Q02196 202 aa3.3□□□□□ -1.88
BER1YLR412W ATG21Q02887 496 aa3.3□□□□□ -1.88
BER1YLR412W ECM22Q05958 814 aaPredicted RBP3.3□□□□□ -1.88
BER1YLR412W THI3Q07471 609 aa3.3□□□□□ -1.88
BER1YLR412W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88 RIP-Chip
BER1YLR412W RRI1Q12468 440 aa3.3□□□□□ -1.88
BER1YLR412W YPT1P01123 206 aaKnown RBP3.29□□□□□ -1.88
BER1YLR412W GAL1P04385 528 aa3.29□□□□□ -1.88
BER1YLR412W CNA1P23287 553 aa3.29□□□□□ -1.88
BER1YLR412W MCM3P24279 971 aaKnown RBP3.29□□□□□ -1.88
BER1YLR412W MSS51P32335 436 aa3.29□□□□□ -1.88
BER1YLR412W HES1P35843 434 aa3.29□□□□□ -1.88
BER1YLR412W GND1P38720 489 aaKnown RBP3.29□□□□□ -1.88
BER1YLR412W ARN1P38731 627 aa3.29□□□□□ -1.88
BER1YLR412W YIR016WP40572 265 aa3.29□□□□□ -1.88
BER1YLR412W QRI7P43122 407 aa3.29□□□□□ -1.88
BER1YLR412W MDV1P47025 714 aa3.29□□□□□ -1.88
BER1YLR412W LYS20P48570 428 aaKnown RBP3.29□□□□□ -1.88
BER1YLR412W YDR109CQ04585 715 aa3.29□□□□□ -1.88
BER1YLR412W BRE1Q07457 700 aaKnown RBP3.29□□□□□ -1.88
BER1YLR412W IWR1Q07532 353 aaPredicted RBP3.29□□□□□ -1.88
BER1YLR412W ATX2Q12067 313 aa3.29□□□□□ -1.88
BER1YLR412W SUL2Q12325 893 aa3.29□□□□□ -1.88
BER1YLR412W RVB2Q12464 471 aaKnown RBP3.29□□□□□ -1.88
BER1YLR412W URK1P27515 501 aa3.28□□□□□ -1.88
BER1YLR412W TOM71P38825 639 aaKnown RBP3.28□□□□□ -1.88
BER1YLR412W CDC1P40986 491 aa3.28□□□□□ -1.88
BER1YLR412W TAM41P53230 385 aa3.28□□□□□ -1.88
BER1YLR412W VTC3Q02725 835 aa3.28□□□□□ -1.88
BER1YLR412W PDR8Q06149 701 aa3.28□□□□□ -1.88
BER1YLR412W MLC2Q06580 163 aa3.28□□□□□ -1.88
BER1YLR412W SNA4Q07549 140 aa3.28□□□□□ -1.88
BER1YLR412W PIF1P07271 859 aa3.27□□□□□ -1.89
BER1YLR412W MSS18P08593 268 aa3.27□□□□□ -1.89
BER1YLR412W PET122P10355 254 aa3.27□□□□□ -1.89
BER1YLR412W ARP2P32381 391 aaKnown RBP3.27□□□□□ -1.89
BER1YLR412W ATO2P32907 282 aa3.27□□□□□ -1.89
BER1YLR412W SPC72P39723 622 aa3.27□□□□□ -1.89
BER1YLR412W YPT11P48559 417 aa3.27□□□□□ -1.89
BER1YLR412W TAN1P53072 289 aaPredicted RBP3.27□□□□□ -1.89
BER1YLR412W YRB30P53107 440 aaPredicted RBP3.27□□□□□ -1.89
BER1YLR412W LSC1P53598 329 aaKnown RBP3.27□□□□□ -1.89
BER1YLR412W YNL144CP53907 740 aa3.27□□□□□ -1.89
BER1YLR412W MIS1P09440 975 aaKnown RBP3.26□□□□□ -1.89
BER1YLR412W MSH1P25846 959 aa3.26□□□□□ -1.89
BER1YLR412W BUD16P39988 312 aa3.26□□□□□ -1.89
BER1YLR412W SKP2P42843 763 aa3.26□□□□□ -1.89
BER1YLR412W CPR6P53691 371 aaKnown RBP3.26□□□□□ -1.89
BER1YLR412W BOP3P53958 396 aa3.26□□□□□ -1.89
BER1YLR412W MTG1Q03151 367 aaPredicted RBP3.26□□□□□ -1.89
BER1YLR412W GTB1Q04924 702 aa3.26□□□□□ -1.89
BER1YLR412W EIS1Q05050 843 aaKnown RBP3.26□□□□□ -1.89
BER1YLR412W UBX3Q12229 455 aa3.26□□□□□ -1.89
BER1YLR412W YCR006CP25350 157 aa3.25□□□□□ -1.89
BER1YLR412W RFA2P26754 273 aaKnown RBP3.25□□□□□ -1.89
BER1YLR412W PTP2P29461 750 aa3.25□□□□□ -1.89
BER1YLR412W GCD7P32502 381 aaPredicted RBP3.25□□□□□ -1.89
BER1YLR412W MSY1P48527 492 aa3.25□□□□□ -1.89
BER1YLR412W ADE16P54113 591 aaKnown RBP3.25□□□□□ -1.89
BER1YLR412W NUP53Q03790 475 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 78.7 ms