RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YNR061CP53747 219 aa3.38□□□□□ -1.87
YIR040CYIR040C DUS1P53759 423 aaKnown RBP3.38□□□□□ -1.87
YIR040CYIR040C MET14Q02196 202 aa3.38□□□□□ -1.87
YIR040CYIR040C RPM2Q02773 1202 aa3.38□□□□□ -1.87
YIR040CYIR040C YML131WQ03102 365 aa3.38□□□□□ -1.87
YIR040CYIR040C HOT1Q03213 719 aa3.38□□□□□ -1.87
YIR040CYIR040C TAF11Q04226 346 aa3.38□□□□□ -1.87
YIR040CYIR040C RTN1Q04947 295 aaKnown RBP3.38□□□□□ -1.87
YIR040CYIR040C ARO10Q06408 635 aa3.38□□□□□ -1.87
YIR040CYIR040C RRG1Q12167 365 aaPredicted RBP3.38□□□□□ -1.87
YIR040CYIR040C YOR022CQ12204 715 aa3.38□□□□□ -1.87
YIR040CYIR040C TMA17Q12513 150 aa3.38□□□□□ -1.87
YIR040CYIR040C HSH49Q99181 213 aaPredicted RBP3.38□□□□□ -1.87
YIR040CYIR040C ADR1P07248 1323 aa3.38□□□□□ -1.87
YIR040CYIR040C TSC11P40061 1430 aa3.37□□□□□ -1.87
YIR040CYIR040C SPA2P23201 1466 aaKnown RBP3.37□□□□□ -1.87
YIR040CYIR040C REP1P03871 373 aa3.37□□□□□ -1.87
YIR040CYIR040C PHR1P05066 565 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
YIR040CYIR040C SIR3P06701 978 aa3.37□□□□□ -1.87
YIR040CYIR040C SUI3P09064 285 aaKnown RBP3.37□□□□□ -1.87
YIR040CYIR040C NMT1P14743 455 aa3.37□□□□□ -1.87
YIR040CYIR040C SPO16P17122 198 aa3.37□□□□□ -1.87
YIR040CYIR040C ISY1P21374 235 aaPredicted RBP3.37□□□□□ -1.87
YIR040CYIR040C OSM1P21375 501 aaKnown RBP3.37□□□□□ -1.87
YIR040CYIR040C RER1P25560 188 aa3.37□□□□□ -1.87
YIR040CYIR040C HMX1P32339 317 aa3.37□□□□□ -1.87
YIR040CYIR040C MCM10P32354 571 aa3.37□□□□□ -1.87
YIR040CYIR040C ORC2P32833 620 aa3.37□□□□□ -1.87
YIR040CYIR040C PPQ1P32945 549 aa3.37□□□□□ -1.87
YIR040CYIR040C CSE1P33307 960 aa3.37□□□□□ -1.87
YIR040CYIR040C LOT5P34234 306 aa3.37□□□□□ -1.87
YIR040CYIR040C HCS1P34243 683 aa3.37□□□□□ -1.87
YIR040CYIR040C CAF4P36130 643 aa3.37□□□□□ -1.87
YIR040CYIR040C RFC1P38630 861 aaKnown RBP3.37□□□□□ -1.87
YIR040CYIR040C STP2P38704 541 aa3.37□□□□□ -1.87
YIR040CYIR040C YHR078WP38799 552 aa3.37□□□□□ -1.87
YIR040CYIR040C GDH3P39708 457 aa3.37□□□□□ -1.87
YIR040CYIR040C JLP2P40206 208 aa3.37□□□□□ -1.87
YIR040CYIR040C GPP1P41277 250 aaKnown RBP3.37□□□□□ -1.87
YIR040CYIR040C STU2P46675 888 aa3.37□□□□□ -1.87
YIR040CYIR040C HXT16P47185 567 aa3.37□□□□□ -1.87
YIR040CYIR040C SSN8P47821 323 aa3.37□□□□□ -1.87
YIR040CYIR040C VMA10P48836 114 aaKnown RBP3.37□□□□□ -1.87
YIR040CYIR040C NIT3P49954 291 aa3.37□□□□□ -1.87
YIR040CYIR040C YGR237CP50089 785 aa3.37□□□□□ -1.87
YIR040CYIR040C ZIP2P53061 704 aa3.37□□□□□ -1.87
YIR040CYIR040C PUS2P53167 370 aa3.37□□□□□ -1.87
YIR040CYIR040C MRPS35P53292 345 aa3.37□□□□□ -1.87
YIR040CYIR040C YGR266WP53326 701 aa3.37□□□□□ -1.87
YIR040CYIR040C YNL146WP53906 100 aa3.37□□□□□ -1.87
YIR040CYIR040C ERV25P54837 211 aaKnown RBP3.37□□□□□ -1.87
YIR040CYIR040C MUK1Q02866 612 aa3.37□□□□□ -1.87
YIR040CYIR040C KAP120Q02932 1032 aa3.37□□□□□ -1.87
YIR040CYIR040C TRS130Q03660 1102 aa3.37□□□□□ -1.87
YIR040CYIR040C YKU80Q04437 629 aa3.37□□□□□ -1.87
YIR040CYIR040C PIG1Q06216 648 aa3.37□□□□□ -1.87
YIR040CYIR040C GRS2Q06817 618 aa3.37□□□□□ -1.87
YIR040CYIR040C VAM6Q07468 1049 aa3.37□□□□□ -1.87
YIR040CYIR040C SGO1Q08490 590 aa3.37□□□□□ -1.87
YIR040CYIR040C MET7Q08645 548 aa3.37□□□□□ -1.87
YIR040CYIR040C TAH18Q12181 623 aa3.37□□□□□ -1.87
YIR040CYIR040C YOR019WQ99248 730 aa3.37□□□□□ -1.87
YIR040CYIR040C EDE1P34216 1381 aa3.37□□□□□ -1.87
YIR040CYIR040C CPA2P03965 1118 aaKnown RBP3.36□□□□□ -1.87
YIR040CYIR040C FUS3P16892 353 aaKnown RBP3.36□□□□□ -1.87
YIR040CYIR040C VPS34P22543 875 aa3.36□□□□□ -1.87
YIR040CYIR040C RPI1P23250 407 aaKnown RBP3.36□□□□□ -1.87
YIR040CYIR040C PRE8P23639 250 aa3.36□□□□□ -1.87
YIR040CYIR040C DPB2P24482 689 aaPredicted RBP3.36□□□□□ -1.87
YIR040CYIR040C RDS1P25611 832 aa3.36□□□□□ -1.87
YIR040CYIR040C CDC15P27636 974 aa3.36□□□□□ -1.87
YIR040CYIR040C EFT1P32324 842 aaKnown RBP3.36□□□□□ -1.87
YIR040CYIR040C DPH2P32461 534 aa3.36□□□□□ -1.87
YIR040CYIR040C SMI1P32566 505 aa3.36□□□□□ -1.87
YIR040CYIR040C SCT1P32784 759 aa3.36□□□□□ -1.87
YIR040CYIR040C MDL1P33310 695 aa3.36□□□□□ -1.87
YIR040CYIR040C BUD2P33314 1104 aa3.36□□□□□ -1.87
YIR040CYIR040C SPC29P33419 253 aa3.36□□□□□ -1.87
YIR040CYIR040C SDS22P36047 338 aa3.36□□□□□ -1.87
YIR040CYIR040C SRL3P36167 246 aa3.36□□□□□ -1.87
YIR040CYIR040C TYS1P36421 394 aaKnown RBP3.36□□□□□ -1.87
YIR040CYIR040C SMF2P38778 549 aa3.36□□□□□ -1.87
YIR040CYIR040C RTT107P38850 1070 aa3.36□□□□□ -1.87
YIR040CYIR040C GDI1P39958 451 aaKnown RBP3.36□□□□□ -1.87
YIR040CYIR040C GIM4P40005 111 aaKnown RBP3.36□□□□□ -1.87
YIR040CYIR040C ALG5P40350 334 aa3.36□□□□□ -1.87
YIR040CYIR040C YIL161WP40449 235 aaKnown RBP3.36□□□□□ -1.87
YIR040CYIR040C YIL092WP40497 633 aa3.36□□□□□ -1.87
YIR040CYIR040C SYG1P40528 902 aa3.36□□□□□ -1.87
YIR040CYIR040C LOC1P43586 204 aaPredicted RBP3.36□□□□□ -1.87
YIR040CYIR040C AIP1P46680 615 aaKnown RBP3.36□□□□□ -1.87
YIR040CYIR040C RPN14P53196 417 aa3.36□□□□□ -1.87
YIR040CYIR040C DAM1P53267 343 aa3.36□□□□□ -1.87
YIR040CYIR040C RBG2P53295 368 aaKnown RBP3.36□□□□□ -1.87
YIR040CYIR040C MRPL50P53724 139 aa3.36□□□□□ -1.87
YIR040CYIR040C ARC35P53731 342 aaKnown RBP3.36□□□□□ -1.87
YIR040CYIR040C MRS2Q01926 470 aa3.36□□□□□ -1.87
YIR040CYIR040C ATP25Q03153 612 aa3.36□□□□□ -1.87
YIR040CYIR040C MUB1Q03162 620 aa3.36□□□□□ -1.87
YIR040CYIR040C PRP42Q03776 544 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms