RNA–Protein interactions for RNA: YGL120C

PRP43, Transcript of RNA helicase in the DEAH-box family, yeast

Gene PRP43, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP43	YGL120C	MND1	P53102	219 aa		4.85	□□□□□ -1.63
PRP43	YGL120C	PIB2	P53191	635 aa		4.85	□□□□□ -1.63
PRP43	YGL120C	BUD22	Q04347	519 aa	Known RBP	4.85	□□□□□ -1.63
PRP43	YGL120C	HCR1	Q05775	265 aa	Known RBP	4.85	□□□□□ -1.63
PRP43	YGL120C	CUE5	Q08412	411 aa	Known RBP	4.85	□□□□□ -1.63
PRP43	YGL120C	GRE2	Q12068	342 aa	Known RBP	4.85	□□□□□ -1.63
PRP43	YGL120C	MNL2	Q12205	849 aa		4.85	□□□□□ -1.63
PRP43	YGL120C	RPN5	Q12250	445 aa	Known RBP	4.85	□□□□□ -1.63
PRP43	YGL120C	MIS1	P09440	975 aa	Known RBP	4.84	□□□□□ -1.63
PRP43	YGL120C	TUB1	P09733	447 aa	Known RBP	4.84	□□□□□ -1.63
PRP43	YGL120C	GLN4	P13188	809 aa	Known RBP	4.84	□□□□□ -1.63
PRP43	YGL120C	SPO16	P17122	198 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	UTR1	P21373	530 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	SEC62	P21825	274 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	PHO11	P35842	467 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	TPO5	P36029	618 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	RDH54	P38086	958 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	POL12	P38121	705 aa	Predicted RBP	4.84	□□□□□ -1.63
PRP43	YGL120C	CDS1	P38221	457 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	PHO12	P38693	467 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	SEN34	P39707	275 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	YIL161W	P40449	235 aa	Known RBP	4.84	□□□□□ -1.63
PRP43	YGL120C	ERG10	P41338	398 aa	Known RBP	4.84	□□□□□ -1.63
PRP43	YGL120C	CCT7	P42943	550 aa	Known RBP	4.84	□□□□□ -1.63
PRP43	YGL120C	SEH1	P53011	349 aa	Known RBP	4.84	□□□□□ -1.63
PRP43	YGL120C	MET13	P53128	600 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	SOL4	P53315	255 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	PRP42	Q03776	544 aa	Known RBP	4.84	□□□□□ -1.63
PRP43	YGL120C	GIM5	Q04493	163 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	FMP42	Q04991	504 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	YLR345W	Q06137	509 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	MHR1	Q06630	226 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	LUC7	Q07508	261 aa	Predicted RBP	4.84	□□□□□ -1.63
PRP43	YGL120C	PIN2	Q12057	282 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	RAD61	Q99359	647 aa		4.84	□□□□□ -1.63
PRP43	YGL120C	PYC1	P11154	1178 aa	Known RBP	4.84	□□□□□ -1.64
PRP43	YGL120C	CHS3	P29465	1165 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	YUH1	P35127	236 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.64	not detected
PRP43	YGL120C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.64	not detected
PRP43	YGL120C	FTH1	P38310	465 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	RIM4	P38741	713 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	RSP5	P39940	809 aa	Known RBP	4.84	□□□□□ -1.64
PRP43	YGL120C	IRC24	P40580	263 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	FMP32	P43557	207 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	SPO74	P45819	413 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	DLD2	P46681	530 aa	Known RBP	4.84	□□□□□ -1.64
PRP43	YGL120C	AIM24	P47127	394 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	PIP2	P52960	996 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	KTR6	P54070	446 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	ARP4	P80428	489 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	ELP3	Q02908	557 aa	Known RBP	4.84	□□□□□ -1.64
PRP43	YGL120C	NHP10	Q03435	203 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	YMR027W	Q04371	470 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	SWF1	Q04629	336 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	YLR455W	Q06188	304 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	WHI4	Q07655	649 aa	Known RBP	4.84	□□□□□ -1.64
PRP43	YGL120C	SKI7	Q08491	747 aa	Predicted RBP	4.84	□□□□□ -1.64
PRP43	YGL120C	ESA1	Q08649	445 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	HRK1	Q08732	759 aa	Known RBP	4.84	□□□□□ -1.64
PRP43	YGL120C	KEL3	Q08979	651 aa	Predicted RBP	4.84	□□□□□ -1.64
PRP43	YGL120C	NUR1	Q12066	484 aa		4.84	□□□□□ -1.64
PRP43	YGL120C	CHS1	P08004	1131 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	RPI1	P23250	407 aa	Known RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	HXT2	P23585	541 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	GIT1	P25346	518 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	PMT2	P31382	759 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	RMA1	P36001	430 aa	Known RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	MRPL7	P36519	292 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	PTC4	P38089	393 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	YDR089W	P38966	869 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	SSP120	P39931	234 aa	Known RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	INP51	P40559	946 aa	Known RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
PRP43	YGL120C	ROM1	P53046	1155 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	NUT1	P53114	1132 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	YBP2	P53169	641 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	MUK1	Q02866	612 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	VHS1	Q03785	461 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	YLR326W	Q06170	240 aa	Known RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	VTA1	Q06263	330 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	TMA46	Q12000	345 aa	Known RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	TMA7	Q3E764	64 aa	Known RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	GEA2	P39993	1459 aa	Known RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	YCF1	P39109	1515 aa	Known RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	GCN4	P03069	281 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	RPL25	P04456	142 aa	Known RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	CAR2	P07991	424 aa	Known RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	RNR2	P09938	399 aa	Known RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	MRP2	P10663	115 aa	Predicted RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	YAK1	P14680	807 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	IDI1	P15496	288 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	COX11	P19516	300 aa	Known RBP	4.83	□□□□□ -1.64
PRP43	YGL120C	ATP12	P22135	325 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	HIR1	P32479	840 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	SUL1	P38359	859 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	YHL017W	P38745	532 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	VMA7	P39111	118 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	ICE2	P40499	491 aa		4.83	□□□□□ -1.64
PRP43	YGL120C	CAB2	P40506	365 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms