RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN9	YDR427W	YPL191C	Q08930	360 aa		4.23	□□□□□ -1.73
RPN9	YDR427W	SUL2	Q12325	893 aa		4.23	□□□□□ -1.73
RPN9	YDR427W	PNO1	Q99216	274 aa	Known RBP	4.23	□□□□□ -1.73
RPN9	YDR427W	MIS1	P09440	975 aa	Known RBP	4.22	□□□□□ -1.73
RPN9	YDR427W	SEC18	P18759	758 aa	Known RBP	4.22	□□□□□ -1.73
RPN9	YDR427W	PDE1	P22434	369 aa		4.22	□□□□□ -1.73
RPN9	YDR427W	ARP2	P32381	391 aa	Known RBP	4.22	□□□□□ -1.73
RPN9	YDR427W	ASK1	P35734	292 aa		4.22	□□□□□ -1.73
RPN9	YDR427W	YBR138C	P38277	524 aa		4.22	□□□□□ -1.73
RPN9	YDR427W	VBA2	P38358	474 aa	Known RBP	4.22	□□□□□ -1.73
RPN9	YDR427W	BUD16	P39988	312 aa		4.22	□□□□□ -1.73
RPN9	YDR427W	JHD1	P40034	492 aa		4.22	□□□□□ -1.73
RPN9	YDR427W	YJR008W	P47085	338 aa		4.22	□□□□□ -1.73
RPN9	YDR427W	YNL058C	P53947	316 aa		4.22	□□□□□ -1.73
RPN9	YDR427W	ATG21	Q02887	496 aa		4.22	□□□□□ -1.73
RPN9	YDR427W	CIA1	Q05583	330 aa		4.22	□□□□□ -1.73
RPN9	YDR427W	LYS21	Q12122	440 aa	Known RBP	4.22	□□□□□ -1.73
RPN9	YDR427W	PRS5	Q12265	496 aa	Known RBP	4.22	□□□□□ -1.73
RPN9	YDR427W	PGI1	P12709	554 aa	Known RBP	4.21	□□□□□ -1.74
RPN9	YDR427W	NOP1	P15646	327 aa	Known RBP	4.21	□□□□□ -1.74
RPN9	YDR427W	RPF2	P36160	344 aa	Known RBP	4.21	□□□□□ -1.74
RPN9	YDR427W	IMD2	P38697	523 aa	Known RBP	4.21	□□□□□ -1.74
RPN9	YDR427W	PUG1	P40100	303 aa		4.21	□□□□□ -1.74
RPN9	YDR427W	TPM2	P40414	161 aa		4.21	□□□□□ -1.74
RPN9	YDR427W	IMD3	P50095	523 aa	Known RBP	4.21	□□□□□ -1.74
RPN9	YDR427W	LSC1	P53598	329 aa	Known RBP	4.21	□□□□□ -1.74
RPN9	YDR427W	YAT1	P80235	687 aa		4.21	□□□□□ -1.74
RPN9	YDR427W	RSC9	Q03124	581 aa		4.21	□□□□□ -1.74
RPN9	YDR427W	ARA2	Q04212	335 aa		4.21	□□□□□ -1.74
RPN9	YDR427W	GTB1	Q04924	702 aa		4.21	□□□□□ -1.74
RPN9	YDR427W	RTC1	Q08281	1341 aa		4.21	□□□□□ -1.74
RPN9	YDR427W	PHO81	P17442	1178 aa		4.2	□□□□□ -1.74
RPN9	YDR427W	URK1	P27515	501 aa		4.2	□□□□□ -1.74
RPN9	YDR427W	HES1	P35843	434 aa		4.2	□□□□□ -1.74
RPN9	YDR427W	FTH1	P38310	465 aa		4.2	□□□□□ -1.74
RPN9	YDR427W	FSH1	P38777	243 aa	Known RBP	4.2	□□□□□ -1.74
RPN9	YDR427W	TAM41	P53230	385 aa		4.2	□□□□□ -1.74
RPN9	YDR427W	IDP3	P53982	420 aa	Known RBP	4.2	□□□□□ -1.74
RPN9	YDR427W	BI2	P03873	423 aa		4.19	□□□□□ -1.74
RPN9	YDR427W	APA1	P16550	321 aa	Known RBP	4.19	□□□□□ -1.74
RPN9	YDR427W	NCP1	P16603	691 aa	Known RBP	4.19	□□□□□ -1.74
RPN9	YDR427W	MSM1	P22438	575 aa		4.19	□□□□□ -1.74
RPN9	YDR427W	UBP7	P40453	1071 aa		4.19	□□□□□ -1.74
RPN9	YDR427W	CIN1	P40987	1014 aa		4.19	□□□□□ -1.74
RPN9	YDR427W	NPA3	P47122	385 aa		4.19	□□□□□ -1.74
RPN9	YDR427W	TPO3	Q06451	622 aa		4.19	□□□□□ -1.74
RPN9	YDR427W	PET122	P10355	254 aa		4.18	□□□□□ -1.74
RPN9	YDR427W	URE2	P23202	354 aa	Known RBP	4.18	□□□□□ -1.74
RPN9	YDR427W	CLB4	P24871	460 aa		4.18	□□□□□ -1.74
RPN9	YDR427W	SIP1	P32578	815 aa		4.18	□□□□□ -1.74
RPN9	YDR427W	GEX2	P36173	615 aa		4.18	□□□□□ -1.74
RPN9	YDR427W	TRS130	Q03660	1102 aa		4.18	□□□□□ -1.74
RPN9	YDR427W	NUP53	Q03790	475 aa		4.18	□□□□□ -1.74
RPN9	YDR427W	RVB2	Q12464	471 aa	Known RBP	4.18	□□□□□ -1.74
RPN9	YDR427W	YCL049C	P25577	312 aa		4.17	□□□□□ -1.74
RPN9	YDR427W	SWC3	P31376	625 aa		4.17	□□□□□ -1.74
RPN9	YDR427W	GSH1	P32477	678 aa		4.17	□□□□□ -1.74
RPN9	YDR427W	GCS1	P35197	352 aa		4.17	□□□□□ -1.74
RPN9	YDR427W	ERV46	P39727	415 aa		4.17	□□□□□ -1.74
RPN9	YDR427W	IRC7	P43623	340 aa		4.17	□□□□□ -1.74
RPN9	YDR427W	YRB30	P53107	440 aa	Predicted RBP	4.17	□□□□□ -1.74
RPN9	YDR427W	YGR079W	P53249	370 aa		4.17	□□□□□ -1.74
RPN9	YDR427W	ARC35	P53731	342 aa	Known RBP	4.17	□□□□□ -1.74
RPN9	YDR427W	YPL071C	Q02864	156 aa		4.17	□□□□□ -1.74
RPN9	YDR427W	MTG1	Q03151	367 aa	Predicted RBP	4.17	□□□□□ -1.74
RPN9	YDR427W	VAM6	Q07468	1049 aa		4.17	□□□□□ -1.74
RPN9	YDR427W	COX1	P00401	534 aa		4.16	□□□□□ -1.74
RPN9	YDR427W	YML003W	P0CF16	290 aa		4.16	□□□□□ -1.74
RPN9	YDR427W	PTC6	P25646	442 aa		4.16	□□□□□ -1.74
RPN9	YDR427W	LAC1	P28496	418 aa		4.16	□□□□□ -1.74
RPN9	YDR427W	NPR3	P38742	1146 aa		4.16	□□□□□ -1.74
RPN9	YDR427W	PHM8	P40025	321 aa		4.16	□□□□□ -1.74
RPN9	YDR427W	IES5	P40060	125 aa		4.16	□□□□□ -1.74
RPN9	YDR427W	MAF1	P41910	395 aa		4.16	□□□□□ -1.74
RPN9	YDR427W	MSY1	P48527	492 aa		4.16	□□□□□ -1.74
RPN9	YDR427W	AAT1	Q01802	451 aa		4.16	□□□□□ -1.74
RPN9	YDR427W	ATG23	Q06671	453 aa		4.16	□□□□□ -1.74
RPN9	YDR427W	LEA1	Q08963	238 aa	Predicted RBP	4.16	□□□□□ -1.74
RPN9	YDR427W	BAG7	Q12128	409 aa		4.16	□□□□□ -1.74
RPN9	YDR427W	YMR085W	P0CF18	432 aa		4.15	□□□□□ -1.75
RPN9	YDR427W	SNU56	Q03782	492 aa	Known RBP	4.15	□□□□□ -1.75
RPN9	YDR427W	TFC6	Q06339	672 aa		4.15	□□□□□ -1.75
RPN9	YDR427W	ILV2	P07342	687 aa	Known RBP	4.14	□□□□□ -1.75
RPN9	YDR427W	MTF2	P10849	440 aa		4.14	□□□□□ -1.75
RPN9	YDR427W	DBF20	P32328	564 aa		4.14	□□□□□ -1.75
RPN9	YDR427W	EXO84	P38261	753 aa		4.14	□□□□□ -1.75
RPN9	YDR427W	FUN12	P39730	1002 aa	Known RBP	4.14	□□□□□ -1.75
RPN9	YDR427W	DJP1	P40564	432 aa		4.14	□□□□□ -1.75
RPN9	YDR427W	COP1	P53622	1201 aa	Known RBP	4.14	□□□□□ -1.75
RPN9	YDR427W	CSL4	P53859	292 aa	Predicted RBP	4.14	□□□□□ -1.75
RPN9	YDR427W	BLS1	Q06071	122 aa		4.14	□□□□□ -1.75
RPN9	YDR427W	YOR389W	Q08912	624 aa		4.14	□□□□□ -1.75
RPN9	YDR427W	CRC1	Q12289	327 aa		4.14	□□□□□ -1.75
RPN9	YDR427W	YOR111W	Q99210	232 aa		4.14	□□□□□ -1.75
RPN9	YDR427W	ILS1	P09436	1072 aa	Known RBP	4.13	□□□□□ -1.75
RPN9	YDR427W	YSP3	P25036	478 aa		4.13	□□□□□ -1.75
RPN9	YDR427W	LRE1	P25579	583 aa	Known RBP	4.13	□□□□□ -1.75
RPN9	YDR427W	GCD7	P32502	381 aa	Predicted RBP	4.13	□□□□□ -1.75
RPN9	YDR427W	PTH2	P34222	208 aa		4.13	□□□□□ -1.75
RPN9	YDR427W	YAT2	P40017	923 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 46 ms