RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W MDM36Q06820 579 aa1.45□□□□□ -2.18
MSN5YDR335W TCO89Q08921 799 aa1.45□□□□□ -2.18
MSN5YDR335W SCM3Q12334 223 aa1.45□□□□□ -2.18
MSN5YDR335W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
MSN5YDR335W SEC7P11075 2009 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W RPS17AP02407 136 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W HSP82P02829 709 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W CDC24P11433 854 aaPredicted RBP1.45□□□□□ -2.18
MSN5YDR335W RPS17BP14127 136 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W MSS116P15424 664 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W UBC1P21734 215 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W YCK1P23291 538 aa1.45□□□□□ -2.18
MSN5YDR335W CLB1P24868 471 aa1.45□□□□□ -2.18
MSN5YDR335W PHO84P25297 587 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W CDC48P25694 835 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W APL1P27351 700 aa1.45□□□□□ -2.18
MSN5YDR335W ARP2P32381 391 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W SFA1P32771 386 aa1.45□□□□□ -2.18
MSN5YDR335W SMY2P32909 740 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W XRS2P33301 854 aa1.45□□□□□ -2.18
MSN5YDR335W AFR1P33304 620 aa1.45□□□□□ -2.18
MSN5YDR335W YEL1P34225 687 aa1.45□□□□□ -2.18
MSN5YDR335W CST26P38226 397 aa1.45□□□□□ -2.18
MSN5YDR335W YHL012WP38709 493 aa1.45□□□□□ -2.18
MSN5YDR335W SPO22P40511 975 aa1.45□□□□□ -2.18
MSN5YDR335W MET12P46151 657 aa1.45□□□□□ -2.18
MSN5YDR335W STU2P46675 888 aa1.45□□□□□ -2.18
MSN5YDR335W YNR068CP53754 272 aa1.45□□□□□ -2.18
MSN5YDR335W NOG1Q02892 647 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W ATP25Q03153 612 aa1.45□□□□□ -2.18
MSN5YDR335W CIA1Q05583 330 aa1.45□□□□□ -2.18
MSN5YDR335W YLR407WQ06070 228 aa1.45□□□□□ -2.18
MSN5YDR335W ADY3Q07732 790 aa1.45□□□□□ -2.18
MSN5YDR335W BMS1Q08965 1183 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W NBP2Q12163 236 aa1.45□□□□□ -2.18
MSN5YDR335W SLP1Q12232 587 aa1.45□□□□□ -2.18
MSN5YDR335W YDL177CQ12257 170 aa1.45□□□□□ -2.18
MSN5YDR335W YLR278CQ05854 1341 aa1.45□□□□□ -2.18
MSN5YDR335W PRO3P32263 286 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W ELM1P32801 640 aa1.44□□□□□ -2.18
MSN5YDR335W YUH1P35127 236 aa1.44□□□□□ -2.18
MSN5YDR335W YBR138CP38277 524 aa1.44□□□□□ -2.18
MSN5YDR335W GND1P38720 489 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W QNS1P38795 714 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W LNP1P38878 278 aa1.44□□□□□ -2.18
MSN5YDR335W STT3P39007 718 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W PZF1P39933 429 aa1.44□□□□□ -2.18
MSN5YDR335W AGX1P43567 385 aa1.44□□□□□ -2.18
MSN5YDR335W MRX6P48564 524 aa1.44□□□□□ -2.18
MSN5YDR335W SPT20P50875 604 aa1.44□□□□□ -2.18
MSN5YDR335W YML6P51998 286 aa1.44□□□□□ -2.18
MSN5YDR335W MTD1Q02046 320 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W MEC3Q02574 474 aa1.44□□□□□ -2.18
MSN5YDR335W NGL3Q03210 505 aa1.44□□□□□ -2.18
MSN5YDR335W YIG1Q08956 461 aa1.44□□□□□ -2.18
MSN5YDR335W ICL2Q12031 575 aa1.44□□□□□ -2.18
MSN5YDR335W YOL107WQ12239 342 aa1.44□□□□□ -2.18
MSN5YDR335W RIB2Q12362 591 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W ERG27Q12452 347 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W MRPL23Q12487 163 aaPredicted RBP1.44□□□□□ -2.18
MSN5YDR335W AVL9Q12500 764 aa1.44□□□□□ -2.18
MSN5YDR335W YOL159C-AQ3E769 90 aa1.44□□□□□ -2.18
MSN5YDR335W YLR149CQ99296 730 aa1.44□□□□□ -2.18
MSN5YDR335W COQ4O13525 335 aa1.44□□□□□ -2.18
MSN5YDR335W RNQ1P25367 405 aa1.44□□□□□ -2.18
MSN5YDR335W PRP45P28004 379 aaPredicted RBP1.44□□□□□ -2.18
MSN5YDR335W IMP2'P32351 346 aa1.44□□□□□ -2.18
MSN5YDR335W IME2P32581 645 aa1.44□□□□□ -2.18
MSN5YDR335W MRP4P32902 394 aa1.44□□□□□ -2.18
MSN5YDR335W YLF2P38746 405 aa1.44□□□□□ -2.18
MSN5YDR335W HRB1P38922 454 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
MSN5YDR335W SAK1P38990 1142 aa1.44□□□□□ -2.18
MSN5YDR335W MEF2P39677 819 aa1.44□□□□□ -2.18
MSN5YDR335W OYE3P41816 400 aaPredicted RBP1.44□□□□□ -2.18
MSN5YDR335W SSY5P47002 699 aa1.44□□□□□ -2.18
MSN5YDR335W DAK1P54838 584 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W EFR3Q03653 782 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W THI22Q06490 572 aa1.44□□□□□ -2.18
MSN5YDR335W HRK1Q08732 759 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W RCN2Q12044 265 aa1.44□□□□□ -2.18
MSN5YDR335W YVC1Q12324 675 aa1.44□□□□□ -2.18
MSN5YDR335W ATP2P00830 511 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W SAM35P14693 329 aa1.44□□□□□ -2.18
MSN5YDR335W RPB4P20433 221 aaPredicted RBP1.44□□□□□ -2.18
MSN5YDR335W PPH22P23595 377 aa1.44□□□□□ -2.18
MSN5YDR335W ROX1P25042 368 aa1.44□□□□□ -2.18
MSN5YDR335W SED4P25365 1065 aa1.44□□□□□ -2.18
MSN5YDR335W BOS1P25385 244 aa1.44□□□□□ -2.18
MSN5YDR335W ICL1P28240 557 aaPredicted RBP1.44□□□□□ -2.18
MSN5YDR335W CDC12P32468 407 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W KKQ8P36004 724 aa1.44□□□□□ -2.18
MSN5YDR335W MRPL37P36532 105 aa1.44□□□□□ -2.18
MSN5YDR335W APN2P38207 520 aa1.44□□□□□ -2.18
MSN5YDR335W SGN1P40561 250 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
MSN5YDR335W CCT7P42943 550 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W GSM1P42950 618 aa1.44□□□□□ -2.18
MSN5YDR335W IRC6P43615 237 aa1.44□□□□□ -2.18
MSN5YDR335W LSC1P53598 329 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W RIA1P53893 1110 aa1.44□□□□□ -2.18
MSN5YDR335W YSA1Q01976 231 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms