RNA–Protein interactions for RNA: YDL127W

PCL2, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL2, Length 927 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL2	YDL127W	Q0010	Q9ZZX9	128 aa		4.95	□□□□□ -1.62
PCL2	YDL127W	MRPL36	P36531	177 aa		4.94	□□□□□ -1.62
PCL2	YDL127W	ERC1	P38767	581 aa		4.94	□□□□□ -1.62
PCL2	YDL127W	SNM1	P40993	198 aa		4.94	□□□□□ -1.62
PCL2	YDL127W	UBX6	P47049	396 aa		4.94	□□□□□ -1.62
PCL2	YDL127W	STP1	Q00947	519 aa		4.94	□□□□□ -1.62
PCL2	YDL127W	GTB1	Q04924	702 aa		4.94	□□□□□ -1.62
PCL2	YDL127W	RAD34	Q06665	692 aa		4.94	□□□□□ -1.62
PCL2	YDL127W	ATG23	Q06671	453 aa		4.94	□□□□□ -1.62
PCL2	YDL127W	LYS21	Q12122	440 aa	Known RBP	4.94	□□□□□ -1.62
PCL2	YDL127W	RTC1	Q08281	1341 aa		4.94	□□□□□ -1.62
PCL2	YDL127W	SEC18	P18759	758 aa	Known RBP	4.93	□□□□□ -1.62
PCL2	YDL127W	SPC72	P39723	622 aa		4.93	□□□□□ -1.62
PCL2	YDL127W	SEC5	P89102	971 aa		4.93	□□□□□ -1.62
PCL2	YDL127W	MTG1	Q03151	367 aa	Predicted RBP	4.93	□□□□□ -1.62
PCL2	YDL127W	SNU56	Q03782	492 aa	Known RBP	4.93	□□□□□ -1.62
PCL2	YDL127W	PRS5	Q12265	496 aa	Known RBP	4.93	□□□□□ -1.62
PCL2	YDL127W	TOP1	P04786	769 aa		4.92	□□□□□ -1.62
PCL2	YDL127W	CLB4	P24871	460 aa		4.92	□□□□□ -1.62
PCL2	YDL127W	PTC6	P25646	442 aa		4.92	□□□□□ -1.62
PCL2	YDL127W	LAC1	P28496	418 aa		4.92	□□□□□ -1.62
PCL2	YDL127W	ARP2	P32381	391 aa	Known RBP	4.92	□□□□□ -1.62
PCL2	YDL127W	ACA1	P39970	489 aa		4.92	□□□□□ -1.62
PCL2	YDL127W	NPA3	P47122	385 aa		4.92	□□□□□ -1.62
PCL2	YDL127W	YRB30	P53107	440 aa	Predicted RBP	4.92	□□□□□ -1.62
PCL2	YDL127W	TRS130	Q03660	1102 aa		4.92	□□□□□ -1.62
PCL2	YDL127W	SUL2	Q12325	893 aa		4.92	□□□□□ -1.62
PCL2	YDL127W	ICT1	Q12385	394 aa		4.92	□□□□□ -1.62
PCL2	YDL127W	MSM1	P22438	575 aa		4.91	□□□□□ -1.62
PCL2	YDL127W	SWI4	P25302	1093 aa	Known RBP	4.91	□□□□□ -1.62
PCL2	YDL127W	URK1	P27515	501 aa		4.91	□□□□□ -1.62
PCL2	YDL127W	NUP120	P35729	1037 aa		4.91	□□□□□ -1.62
PCL2	YDL127W	HES1	P35843	434 aa		4.91	□□□□□ -1.62
PCL2	YDL127W	NPR3	P38742	1146 aa		4.91	□□□□□ -1.62
PCL2	YDL127W	JHD1	P40034	492 aa		4.91	□□□□□ -1.62
PCL2	YDL127W	PUG1	P40100	303 aa		4.91	□□□□□ -1.62
PCL2	YDL127W	MNT3	P40549	630 aa		4.91	□□□□□ -1.62
PCL2	YDL127W	DJP1	P40564	432 aa		4.91	□□□□□ -1.62
PCL2	YDL127W	CIN1	P40987	1014 aa		4.91	□□□□□ -1.62
PCL2	YDL127W	YGR079W	P53249	370 aa		4.91	□□□□□ -1.62
PCL2	YDL127W	LEA1	Q08963	238 aa	Predicted RBP	4.91	□□□□□ -1.62
PCL2	YDL127W	CRC1	Q12289	327 aa		4.91	□□□□□ -1.62
PCL2	YDL127W	PGI1	P12709	554 aa	Known RBP	4.9	□□□□□ -1.63
PCL2	YDL127W	COQ3	P27680	312 aa		4.9	□□□□□ -1.63
PCL2	YDL127W	MSS51	P32335	436 aa		4.9	□□□□□ -1.63
PCL2	YDL127W	PTH2	P34222	208 aa		4.9	□□□□□ -1.63
PCL2	YDL127W	IMD2	P38697	523 aa	Known RBP	4.9	□□□□□ -1.63
PCL2	YDL127W	SPC97	P38863	823 aa		4.9	□□□□□ -1.63
PCL2	YDL127W	CFD1	P40558	293 aa		4.9	□□□□□ -1.63
PCL2	YDL127W	ZAP1	P47043	880 aa		4.9	□□□□□ -1.63
PCL2	YDL127W	IMD3	P50095	523 aa	Known RBP	4.9	□□□□□ -1.63
PCL2	YDL127W	ORC5	P50874	479 aa		4.9	□□□□□ -1.63
PCL2	YDL127W	BAG7	Q12128	409 aa		4.9	□□□□□ -1.63
PCL2	YDL127W	COX1	P00401	534 aa		4.89	□□□□□ -1.63
PCL2	YDL127W	YMR085W	P0CF18	432 aa		4.89	□□□□□ -1.63
PCL2	YDL127W	TMT1	P32643	299 aa		4.89	□□□□□ -1.63
PCL2	YDL127W	YDR109C	Q04585	715 aa		4.89	□□□□□ -1.63
PCL2	YDL127W	SPO16	P17122	198 aa		4.88	□□□□□ -1.63
PCL2	YDL127W	YAP1	P19880	650 aa	Known RBP	4.88	□□□□□ -1.63
PCL2	YDL127W	GSH1	P32477	678 aa		4.88	□□□□□ -1.63
PCL2	YDL127W	BUD16	P39988	312 aa		4.88	□□□□□ -1.63
PCL2	YDL127W	PHM8	P40025	321 aa		4.88	□□□□□ -1.63
PCL2	YDL127W	GAT1	P43574	510 aa		4.88	□□□□□ -1.63
PCL2	YDL127W	COP1	P53622	1201 aa	Known RBP	4.88	□□□□□ -1.63
PCL2	YDL127W	BLS1	Q06071	122 aa		4.88	□□□□□ -1.63
PCL2	YDL127W	THI3	Q07471	609 aa		4.88	□□□□□ -1.63
PCL2	YDL127W	GET3	Q12154	354 aa	Known RBP	4.88	□□□□□ -1.63
PCL2	YDL127W	RGT2	Q12300	763 aa		4.88	□□□□□ -1.63
PCL2	YDL127W	LRE1	P25579	583 aa	Known RBP	4.87	□□□□□ -1.63
PCL2	YDL127W	PSF2	P40359	213 aa		4.87	□□□□□ -1.63
PCL2	YDL127W	YIL161W	P40449	235 aa	Known RBP	4.87	□□□□□ -1.63
PCL2	YDL127W	TAM41	P53230	385 aa		4.87	□□□□□ -1.63
PCL2	YDL127W	VTC3	Q02725	835 aa		4.87	□□□□□ -1.63
PCL2	YDL127W	VMS1	Q04311	632 aa	Known RBP	4.87	□□□□□ -1.63
PCL2	YDL127W	MRPL1	Q04599	285 aa		4.87	□□□□□ -1.63
PCL2	YDL127W	YAP7	Q08182	245 aa		4.87	□□□□□ -1.63
PCL2	YDL127W	YCL049C	P25577	312 aa		4.86	□□□□□ -1.63
PCL2	YDL127W	ECM32	P32644	1121 aa	Known RBP	4.86	□□□□□ -1.63
PCL2	YDL127W	YBR138C	P38277	524 aa		4.86	□□□□□ -1.63
PCL2	YDL127W	RPT2	P40327	437 aa	Known RBP	4.86	□□□□□ -1.63
PCL2	YDL127W	PCI8	P40512	444 aa		4.86	□□□□□ -1.63
PCL2	YDL127W	YIL024C	P40543	189 aa		4.86	□□□□□ -1.63
PCL2	YDL127W	MSY1	P48527	492 aa		4.86	□□□□□ -1.63
PCL2	YDL127W	DCP2	P53550	970 aa	Known RBP	4.86	□□□□□ -1.63
PCL2	YDL127W	MRPL13	Q02204	264 aa		4.86	□□□□□ -1.63
PCL2	YDL127W	VAM6	Q07468	1049 aa		4.86	□□□□□ -1.63
PCL2	YDL127W	SWT1	Q12104	458 aa		4.86	□□□□□ -1.63
PCL2	YDL127W	YPR089W	O13585	888 aa		4.85	□□□□□ -1.63
PCL2	YDL127W	NUC1	P08466	329 aa		4.85	□□□□□ -1.63
PCL2	YDL127W	XRS2	P33301	854 aa		4.85	□□□□□ -1.63
PCL2	YDL127W	ARN1	P38731	627 aa		4.85	□□□□□ -1.63
PCL2	YDL127W	TOM71	P38825	639 aa	Known RBP	4.85	□□□□□ -1.63
PCL2	YDL127W	ERV46	P39727	415 aa		4.85	□□□□□ -1.63
PCL2	YDL127W	ASG1	P40467	964 aa		4.85	□□□□□ -1.63
PCL2	YDL127W	YJL107C	P42947	387 aa		4.85	□□□□□ -1.63
PCL2	YDL127W	NCP1	P16603	691 aa	Known RBP	4.84	□□□□□ -1.63
PCL2	YDL127W	ERR3	P42222	437 aa		4.84	□□□□□ -1.63
PCL2	YDL127W	PSR2	Q07949	397 aa		4.84	□□□□□ -1.63
PCL2	YDL127W	ATP2	P00830	511 aa	Known RBP	4.83	□□□□□ -1.64
PCL2	YDL127W	SUI3	P09064	285 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms