RNA–Protein interactions for RNA: YDL030W

PRP9, Transcript of Subunit of the SF3a splicing factor complex, yeast

Gene PRP9, Length 1,593 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP9	YDL030W	PRS5	Q12265	496 aa	Known RBP	4.87	□□□□□ -1.63
PRP9	YDL030W	RNA1	P11745	407 aa	Known RBP	4.86	□□□□□ -1.63
PRP9	YDL030W	ARO9	P38840	513 aa	Predicted RBP	4.86	□□□□□ -1.63
PRP9	YDL030W	FUN12	P39730	1002 aa	Known RBP	4.86	□□□□□ -1.63
PRP9	YDL030W	CEG1	Q01159	459 aa	Predicted RBP	4.86	□□□□□ -1.63
PRP9	YDL030W	RSC9	Q03124	581 aa		4.86	□□□□□ -1.63
PRP9	YDL030W	YDL242W	Q07746	117 aa		4.86	□□□□□ -1.63
PRP9	YDL030W	PNO1	Q99216	274 aa	Known RBP	4.86	□□□□□ -1.63
PRP9	YDL030W	SNT2	P53127	1403 aa		4.85	□□□□□ -1.63
PRP9	YDL030W	ARB1	P40024	610 aa	Known RBP	4.85	□□□□□ -1.63
PRP9	YDL030W	GAT1	P43574	510 aa		4.85	□□□□□ -1.63
PRP9	YDL030W	IDP3	P53982	420 aa	Known RBP	4.85	□□□□□ -1.63
PRP9	YDL030W	PLM2	Q04383	521 aa		4.85	□□□□□ -1.63
PRP9	YDL030W	YML053C	Q04978	212 aa		4.85	□□□□□ -1.63
PRP9	YDL030W	LCB4	Q12246	624 aa		4.85	□□□□□ -1.63
PRP9	YDL030W	KGD2	P19262	463 aa	Predicted RBP	4.84	□□□□□ -1.63
PRP9	YDL030W	RRP43	P25359	394 aa	Predicted RBP	4.84	□□□□□ -1.63
PRP9	YDL030W	GRX7	P38068	203 aa		4.84	□□□□□ -1.63
PRP9	YDL030W	SAP1	P39955	897 aa	Known RBP	4.84	□□□□□ -1.63
PRP9	YDL030W	IOC4	Q04213	475 aa		4.84	□□□□□ -1.63
PRP9	YDL030W	RVB2	Q12464	471 aa	Known RBP	4.84	□□□□□ -1.63
PRP9	YDL030W	ULS1	Q08562	1619 aa		4.84	□□□□□ -1.63
PRP9	YDL030W	GEA2	P39993	1459 aa	Known RBP	4.84	□□□□□ -1.64
PRP9	YDL030W	VPS24	P36095	224 aa	Known RBP	4.83	□□□□□ -1.64
PRP9	YDL030W	VPS8	P39702	1274 aa		4.83	□□□□□ -1.64
PRP9	YDL030W	RGT2	Q12300	763 aa		4.83	□□□□□ -1.64
PRP9	YDL030W	YOL114C	Q12322	202 aa		4.83	□□□□□ -1.64
PRP9	YDL030W	SST2	P11972	698 aa	Known RBP	4.82	□□□□□ -1.64
PRP9	YDL030W	PCT1	P13259	424 aa		4.82	□□□□□ -1.64
PRP9	YDL030W	YKL133C	P36066	463 aa		4.82	□□□□□ -1.64
PRP9	YDL030W	MAD3	P47074	515 aa		4.82	□□□□□ -1.64
PRP9	YDL030W	AIM6	Q07716	390 aa		4.82	□□□□□ -1.64
PRP9	YDL030W	YOR389W	Q08912	624 aa		4.82	□□□□□ -1.64
PRP9	YDL030W	NOP58	Q12499	511 aa	Known RBP	4.82	□□□□□ -1.64
PRP9	YDL030W	Q0010	Q9ZZX9	128 aa		4.82	□□□□□ -1.64
PRP9	YDL030W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.82	□□□□□ -1.64
PRP9	YDL030W	EDE1	P34216	1381 aa		4.82	□□□□□ -1.64
PRP9	YDL030W	KES1	P35844	434 aa	Known RBP	4.82	□□□□□ -1.64
PRP9	YDL030W	FTH1	P38310	465 aa		4.82	□□□□□ -1.64
PRP9	YDL030W	IRC7	P43623	340 aa		4.82	□□□□□ -1.64
PRP9	YDL030W	TAN1	P53072	289 aa	Predicted RBP	4.82	□□□□□ -1.64
PRP9	YDL030W	ESF2	P53743	316 aa	Known RBP	4.82	□□□□□ -1.64
PRP9	YDL030W	PLP2	Q12017	286 aa		4.82	□□□□□ -1.64
PRP9	YDL030W	RTC1	Q08281	1341 aa		4.81	□□□□□ -1.64
PRP9	YDL030W	HSP82	P02829	709 aa	Known RBP	4.81	□□□□□ -1.64
PRP9	YDL030W	SWC3	P31376	625 aa		4.81	□□□□□ -1.64
PRP9	YDL030W	BUD21	Q08492	214 aa	Predicted RBP	4.81	□□□□□ -1.64
PRP9	YDL030W	CRC1	Q12289	327 aa		4.81	□□□□□ -1.64
PRP9	YDL030W	GDB1	Q06625	1536 aa		4.81	□□□□□ -1.64
PRP9	YDL030W	CET1	O13297	549 aa	Predicted RBP	4.8	□□□□□ -1.64
PRP9	YDL030W	YMR085W	P0CF18	432 aa		4.8	□□□□□ -1.64
PRP9	YDL030W	PDE1	P22434	369 aa		4.8	□□□□□ -1.64
PRP9	YDL030W	MSP1	P28737	362 aa		4.8	□□□□□ -1.64
PRP9	YDL030W	SIP1	P32578	815 aa		4.8	□□□□□ -1.64
PRP9	YDL030W	RPF2	P36160	344 aa	Known RBP	4.8	□□□□□ -1.64
PRP9	YDL030W	IMD2	P38697	523 aa	Known RBP	4.8	□□□□□ -1.64
PRP9	YDL030W	IMD3	P50095	523 aa	Known RBP	4.8	□□□□□ -1.64
PRP9	YDL030W	TEP1	P53916	434 aa		4.8	□□□□□ -1.64
PRP9	YDL030W	SNU56	Q03782	492 aa	Known RBP	4.8	□□□□□ -1.64
PRP9	YDL030W	YPL191C	Q08930	360 aa		4.8	□□□□□ -1.64
PRP9	YDL030W	LSP1	Q12230	341 aa	Known RBP	4.8	□□□□□ -1.64
PRP9	YDL030W	YAP1	P19880	650 aa	Known RBP	4.79	□□□□□ -1.64
PRP9	YDL030W	MAK32	P23060	363 aa		4.79	□□□□□ -1.64
PRP9	YDL030W	ECM32	P32644	1121 aa	Known RBP	4.79	□□□□□ -1.64
PRP9	YDL030W	STT3	P39007	718 aa	Known RBP	4.79	□□□□□ -1.64
PRP9	YDL030W	JHD1	P40034	492 aa		4.79	□□□□□ -1.64
PRP9	YDL030W	DJP1	P40564	432 aa		4.79	□□□□□ -1.64
PRP9	YDL030W	MET14	Q02196	202 aa		4.79	□□□□□ -1.64
PRP9	YDL030W	YDL144C	Q07589	356 aa		4.79	□□□□□ -1.64
PRP9	YDL030W	VTH1	P40438	1549 aa		4.79	□□□□□ -1.64
PRP9	YDL030W	VTH2	P40890	1549 aa		4.79	□□□□□ -1.64
PRP9	YDL030W	NUP157	P40064	1391 aa	Known RBP	4.79	□□□□□ -1.64
PRP9	YDL030W	ILS1	P09436	1072 aa	Known RBP	4.78	□□□□□ -1.64
PRP9	YDL030W	SPC110	P32380	944 aa		4.78	□□□□□ -1.64
PRP9	YDL030W	VBA2	P38358	474 aa	Known RBP	4.78	□□□□□ -1.64
PRP9	YDL030W	CAB2	P40506	365 aa		4.78	□□□□□ -1.64
PRP9	YDL030W	MNT3	P40549	630 aa		4.78	□□□□□ -1.64
PRP9	YDL030W	YAT1	P80235	687 aa		4.78	□□□□□ -1.64
PRP9	YDL030W	YPL108W	Q02872	168 aa	Predicted RBP	4.78	□□□□□ -1.64
PRP9	YDL030W	MLC2	Q06580	163 aa		4.78	□□□□□ -1.64
PRP9	YDL030W	ICL2	Q12031	575 aa		4.78	□□□□□ -1.64
PRP9	YDL030W	YBR255C-A	Q3E776	120 aa		4.78	□□□□□ -1.64
PRP9	YDL030W	MDS3	P53094	1487 aa		4.78	□□□□□ -1.64
PRP9	YDL030W	SES1	P07284	462 aa	Known RBP	4.78	□□□□□ -1.64
PRP9	YDL030W	SIR1	P21691	654 aa		4.78	□□□□□ -1.64
PRP9	YDL030W	FRD1	P32614	470 aa	Known RBP	4.78	□□□□□ -1.64
PRP9	YDL030W	CIN1	P40987	1014 aa		4.78	□□□□□ -1.64
PRP9	YDL030W	RAD34	Q06665	692 aa		4.78	□□□□□ -1.64
PRP9	YDL030W	GCN2	P15442	1659 aa		4.78	□□□□□ -1.64
PRP9	YDL030W	ESC1	Q03661	1658 aa	Known RBP	4.78	□□□□□ -1.64
PRP9	YDL030W	GAL1	P04385	528 aa		4.77	□□□□□ -1.65
PRP9	YDL030W	ILV2	P07342	687 aa	Known RBP	4.77	□□□□□ -1.65
PRP9	YDL030W	COQ3	P27680	312 aa		4.77	□□□□□ -1.65
PRP9	YDL030W	APM3	P38153	483 aa		4.77	□□□□□ -1.65
PRP9	YDL030W	HIS6	P40545	261 aa		4.77	□□□□□ -1.65
PRP9	YDL030W	QRI7	P43122	407 aa		4.77	□□□□□ -1.65
PRP9	YDL030W	MPS1	P54199	764 aa		4.77	□□□□□ -1.65
PRP9	YDL030W	ARA2	Q04212	335 aa		4.77	□□□□□ -1.65
PRP9	YDL030W	LYS21	Q12122	440 aa	Known RBP	4.77	□□□□□ -1.65
PRP9	YDL030W	POL3	P15436	1097 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms