RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	MTF2	P10849	440 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	POL3	P15436	1097 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	CAP1	P28495	268 aa	Known RBP	4.75	□□□□□ -1.65
SHE1	YBL031W	DSS4	P32601	143 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	MRPL7	P36519	292 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	MRPL36	P36531	177 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	APL3	P38065	1025 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	MOH1	P38191	138 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	PSY4	P38193	441 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	SPO22	P40511	975 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	IMA1	P53051	589 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	YGR151C	P53287	111 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	TIM44	Q01852	431 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	UFO1	Q04511	668 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	RKI1	Q12189	258 aa		4.75	□□□□□ -1.65
SHE1	YBL031W	PDR18	P53756	1333 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	QCR6	P00127	147 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	CTT1	P06115	562 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	MRP7	P12687	371 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	OAR1	P35731	278 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	NPR3	P38742	1146 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	PCL5	P38794	229 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	PUG1	P40100	303 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	RAD26	P40352	1085 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	NDC80	P40460	691 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	THI6	P41835	540 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	ERR3	P42222	437 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	DAK1	P54838	584 aa	Known RBP	4.74	□□□□□ -1.65
SHE1	YBL031W	MRPL13	Q02204	264 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	EFR3	Q03653	782 aa	Known RBP	4.74	□□□□□ -1.65
SHE1	YBL031W	TRS130	Q03660	1102 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	HBT1	Q07653	1046 aa	Known RBP	4.74	□□□□□ -1.65
SHE1	YBL031W	PSK2	Q08217	1101 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	ACF2	Q12168	779 aa		4.74	□□□□□ -1.65
SHE1	YBL031W	DNF3	Q12674	1656 aa		4.73	□□□□□ -1.65
SHE1	YBL031W	BIK1	P11709	440 aa		4.73	□□□□□ -1.65
SHE1	YBL031W	GFA1	P14742	717 aa	Known RBP	4.73	□□□□□ -1.65
SHE1	YBL031W	RIT1	P23796	513 aa		4.73	□□□□□ -1.65
SHE1	YBL031W	ELF1	P36053	145 aa		4.73	□□□□□ -1.65
SHE1	YBL031W	SET3	P36124	751 aa		4.73	□□□□□ -1.65
SHE1	YBL031W	FSH1	P38777	243 aa	Known RBP	4.73	□□□□□ -1.65
SHE1	YBL031W	CAB2	P40506	365 aa		4.73	□□□□□ -1.65
SHE1	YBL031W	SMK1	P41808	388 aa		4.73	□□□□□ -1.65
SHE1	YBL031W	ARC35	P53731	342 aa	Known RBP	4.73	□□□□□ -1.65
SHE1	YBL031W	ACS1	Q01574	713 aa		4.73	□□□□□ -1.65
SHE1	YBL031W	OPY2	Q06810	360 aa		4.73	□□□□□ -1.65
SHE1	YBL031W	SSP2	Q08646	371 aa		4.73	□□□□□ -1.65
SHE1	YBL031W	APC1	P53886	1748 aa		4.72	□□□□□ -1.65
SHE1	YBL031W	CLB4	P24871	460 aa		4.72	□□□□□ -1.65
SHE1	YBL031W	RPS7A	P26786	190 aa	Known RBP	4.72	□□□□□ -1.65
SHE1	YBL031W	LOT5	P34234	306 aa		4.72	□□□□□ -1.65
SHE1	YBL031W	CBR1	P38626	284 aa	Known RBP	4.72	□□□□□ -1.65
SHE1	YBL031W	OSH3	P38713	996 aa	Known RBP	4.72	□□□□□ -1.65
SHE1	YBL031W	IDS2	P46958	469 aa		4.72	□□□□□ -1.65
SHE1	YBL031W	MLC1	P53141	149 aa		4.72	□□□□□ -1.65
SHE1	YBL031W	SNF12	P53628	566 aa		4.72	□□□□□ -1.65
SHE1	YBL031W	MFM1	Q02783	413 aa		4.72	□□□□□ -1.65
SHE1	YBL031W	SVL3	Q03088	825 aa	Known RBP	4.72	□□□□□ -1.65
SHE1	YBL031W	HOF1	Q05080	669 aa		4.72	□□□□□ -1.65
SHE1	YBL031W	NOP58	Q12499	511 aa	Known RBP	4.72	□□□□□ -1.65
SHE1	YBL031W	NCP1	P16603	691 aa	Known RBP	4.71	□□□□□ -1.66
SHE1	YBL031W	UBC1	P21734	215 aa	Known RBP	4.71	□□□□□ -1.66
SHE1	YBL031W	RPT3	P33298	428 aa	Known RBP	4.71	□□□□□ -1.66
SHE1	YBL031W	KSP1	P38691	1029 aa	Known RBP	4.71	□□□□□ -1.66
SHE1	YBL031W	YHR097C	P38809	366 aa	Known RBP	4.71	□□□□□ -1.66
SHE1	YBL031W	KAP123	P40069	1113 aa	Known RBP	4.71	□□□□□ -1.66
SHE1	YBL031W	CTR1	P49573	406 aa		4.71	□□□□□ -1.66
SHE1	YBL031W	COS12	P53053	380 aa		4.71	□□□□□ -1.66
SHE1	YBL031W	DIP5	P53388	608 aa		4.71	□□□□□ -1.66
SHE1	YBL031W	ATG21	Q02887	496 aa		4.71	□□□□□ -1.66
SHE1	YBL031W	USA1	Q03714	838 aa		4.71	□□□□□ -1.66
SHE1	YBL031W	TMA64	Q04600	565 aa	Known RBP	4.71	□□□□□ -1.66
SHE1	YBL031W	CSR1	Q06705	408 aa	Known RBP	4.71	□□□□□ -1.66
SHE1	YBL031W	AIM6	Q07716	390 aa		4.71	□□□□□ -1.66
SHE1	YBL031W	YPL216W	Q08964	1102 aa		4.71	□□□□□ -1.66
SHE1	YBL031W	ADE3	P07245	946 aa	Known RBP	4.7	□□□□□ -1.66
SHE1	YBL031W	NUC1	P08466	329 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	BET2	P20133	325 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	SWC3	P31376	625 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	RPN12	P32496	274 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	BEM3	P32873	1128 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	MIC60	P36112	540 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	GMH1	P36125	273 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	GLG1	P36143	616 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	YBR138C	P38277	524 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	STB5	P38699	743 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	PSF2	P40359	213 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	TFG2	P41896	400 aa	Predicted RBP	4.7	□□□□□ -1.66
SHE1	YBL031W	PMT6	P42934	759 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	RPS15	Q01855	142 aa	Known RBP	4.7	□□□□□ -1.66
SHE1	YBL031W	RMT2	Q03305	412 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	NEW1	Q08972	1196 aa	Known RBP	4.7	□□□□□ -1.66
SHE1	YBL031W	TGS1	Q12052	315 aa		4.7	□□□□□ -1.66
SHE1	YBL031W	RPL19A	P0CX82	189 aa	Known RBP	4.69	□□□□□ -1.66
SHE1	YBL031W	RPL19B	P0CX83	189 aa	Predicted RBP	4.69	□□□□□ -1.66
SHE1	YBL031W	SWI4	P25302	1093 aa	Known RBP	4.69	□□□□□ -1.66
SHE1	YBL031W	RER1	P25560	188 aa		4.69	□□□□□ -1.66
SHE1	YBL031W	YCR061W	P25639	631 aa		4.69	□□□□□ -1.66
SHE1	YBL031W	RAD16	P31244	790 aa		4.69	□□□□□ -1.66
SHE1	YBL031W	CCL1	P37366	393 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms