RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YPR027CQ12079 277 aa4.14□□□□□ -1.75
PTA1YAL043C IES3Q12345 250 aa4.14□□□□□ -1.75
PTA1YAL043C YMR030W-AQ3E760 96 aa4.14□□□□□ -1.75
PTA1YAL043C FKS1P38631 1876 aaKnown RBP4.14□□□□□ -1.75
PTA1YAL043C CDC31P06704 161 aaKnown RBP4.14□□□□□ -1.75
PTA1YAL043C ADE3P07245 946 aaKnown RBP4.14□□□□□ -1.75
PTA1YAL043C CHS1P08004 1131 aa4.14□□□□□ -1.75
PTA1YAL043C SUI3P09064 285 aaKnown RBP4.14□□□□□ -1.75
PTA1YAL043C NAT1P12945 854 aaKnown RBP4.14□□□□□ -1.75
PTA1YAL043C GAL2P13181 574 aa4.14□□□□□ -1.75
PTA1YAL043C URA10P30402 227 aa4.14□□□□□ -1.75
PTA1YAL043C HEM12P32347 362 aaPredicted RBP4.14□□□□□ -1.75
PTA1YAL043C GDA1P32621 518 aa4.14□□□□□ -1.75
PTA1YAL043C SMY2P32909 740 aaKnown RBP4.14□□□□□ -1.75
PTA1YAL043C SIP2P34164 415 aaKnown RBP4.14□□□□□ -1.75
PTA1YAL043C TOM20P35180 183 aa4.14□□□□□ -1.75
PTA1YAL043C DBP7P36120 742 aaKnown RBP4.14□□□□□ -1.75
PTA1YAL043C SWC5P38326 303 aa4.14□□□□□ -1.75
PTA1YAL043C MEP1P40260 492 aa4.14□□□□□ -1.75
PTA1YAL043C RRT5P43607 289 aa4.14□□□□□ -1.75
PTA1YAL043C GUF1P46943 645 aa4.14□□□□□ -1.75
PTA1YAL043C FMP33P46998 180 aa4.14□□□□□ -1.75
PTA1YAL043C DAK1P54838 584 aaKnown RBP4.14□□□□□ -1.75
PTA1YAL043C HXT15P54854 567 aa4.14□□□□□ -1.75
PTA1YAL043C FMP30Q02883 468 aa4.14□□□□□ -1.75
PTA1YAL043C TDA5Q06417 326 aaKnown RBP4.14□□□□□ -1.75
PTA1YAL043C NDL1Q06568 189 aa4.14□□□□□ -1.75
PTA1YAL043C ERP4Q12450 207 aa4.14□□□□□ -1.75
PTA1YAL043C SPE1P08432 466 aa4.13□□□□□ -1.75
PTA1YAL043C MSD1P15179 658 aaKnown RBP4.13□□□□□ -1.75
PTA1YAL043C TRM1P15565 570 aaKnown RBP4.13□□□□□ -1.75
PTA1YAL043C SEC15P22224 910 aa4.13□□□□□ -1.75
PTA1YAL043C SKG6P32900 734 aaPredicted RBP4.13□□□□□ -1.75
PTA1YAL043C YBR056WP38081 501 aa4.13□□□□□ -1.75
PTA1YAL043C SRP68P38687 599 aaKnown RBP4.13□□□□□ -1.75
PTA1YAL043C KSP1P38691 1029 aaKnown RBP4.13□□□□□ -1.75
PTA1YAL043C OTU2P38747 307 aaKnown RBP4.13□□□□□ -1.75
PTA1YAL043C YHR131CP38835 850 aa4.13□□□□□ -1.75
PTA1YAL043C FRT2P39734 528 aa4.13□□□□□ -1.75
PTA1YAL043C ARG2P40360 574 aa4.13□□□□□ -1.75
PTA1YAL043C AIR1P40507 360 aaKnown RBP4.13□□□□□ -1.75
PTA1YAL043C SAE2P46946 345 aa4.13□□□□□ -1.75
PTA1YAL043C NOP9P47077 666 aaKnown RBP4.13□□□□□ -1.75
PTA1YAL043C HLJ1P48353 224 aa4.13□□□□□ -1.75
PTA1YAL043C AIF1P52923 378 aa4.13□□□□□ -1.75
PTA1YAL043C MND1P53102 219 aa4.13□□□□□ -1.75
PTA1YAL043C RRT6P53117 311 aaPredicted RBP4.13□□□□□ -1.75
PTA1YAL043C MEU1Q07938 337 aaKnown RBP RIP-Chip data4.13□□□□□ -1.75not detected
PTA1YAL043C APC5Q08683 685 aa4.13□□□□□ -1.75
PTA1YAL043C GPN2Q08726 347 aaPredicted RBP4.13□□□□□ -1.75
PTA1YAL043C APC2Q12440 853 aa4.13□□□□□ -1.75
PTA1YAL043C YLR278CQ05854 1341 aa4.13□□□□□ -1.75
PTA1YAL043C WHI2P12611 486 aa4.13□□□□□ -1.75
PTA1YAL043C COX11P19516 300 aaKnown RBP4.13□□□□□ -1.75
PTA1YAL043C EXO70P19658 623 aa4.13□□□□□ -1.75
PTA1YAL043C BEM1P29366 551 aa4.13□□□□□ -1.75
PTA1YAL043C SPR1P32603 445 aa4.13□□□□□ -1.75
PTA1YAL043C PEX6P33760 1030 aa4.13□□□□□ -1.75
PTA1YAL043C ABZ1P37254 787 aaPredicted RBP4.13□□□□□ -1.75
PTA1YAL043C URA8P38627 578 aaPredicted RBP4.13□□□□□ -1.75
PTA1YAL043C MEF2P39677 819 aa4.13□□□□□ -1.75
PTA1YAL043C SIT1P39980 628 aa4.13□□□□□ -1.75
PTA1YAL043C PRK1P40494 810 aa4.13□□□□□ -1.75
PTA1YAL043C BNA3P47039 444 aaKnown RBP4.13□□□□□ -1.75
PTA1YAL043C CSN12P47130 423 aa4.13□□□□□ -1.75
PTA1YAL043C PEX8P53248 589 aa4.13□□□□□ -1.75
PTA1YAL043C PRO2P54885 456 aaKnown RBP4.13□□□□□ -1.75
PTA1YAL043C YML119WQ03208 357 aa4.13□□□□□ -1.75
PTA1YAL043C TAF12Q03761 539 aa4.13□□□□□ -1.75
PTA1YAL043C FMN1Q03778 218 aa4.13□□□□□ -1.75
PTA1YAL043C HED1Q03937 162 aa4.13□□□□□ -1.75
PTA1YAL043C PUS5Q06244 254 aa4.13□□□□□ -1.75
PTA1YAL043C GUD1Q07729 489 aa4.13□□□□□ -1.75
PTA1YAL043C DIS3Q08162 1001 aaKnown RBP4.13□□□□□ -1.75
PTA1YAL043C DDC1Q08949 612 aa4.13□□□□□ -1.75
PTA1YAL043C YLL056CQ12177 298 aa4.13□□□□□ -1.75
PTA1YAL043C GLE1Q12315 538 aa4.13□□□□□ -1.75
PTA1YAL043C TIM9O74700 87 aa4.12□□□□□ -1.75
PTA1YAL043C COX4P04037 155 aa4.12□□□□□ -1.75
PTA1YAL043C RPS3P05750 240 aaKnown RBP4.12□□□□□ -1.75
PTA1YAL043C CDC4P07834 779 aa4.12□□□□□ -1.75
PTA1YAL043C ABF1P14164 731 aa4.12□□□□□ -1.75
PTA1YAL043C SNA3P14359 133 aa4.12□□□□□ -1.75
PTA1YAL043C NSP1P14907 823 aaKnown RBP4.12□□□□□ -1.75
PTA1YAL043C SAT4P25333 603 aaKnown RBP4.12□□□□□ -1.75
PTA1YAL043C MSH2P25847 964 aa4.12□□□□□ -1.75
PTA1YAL043C SLA2P33338 968 aa4.12□□□□□ -1.75
PTA1YAL043C VAB2P40003 282 aa4.12□□□□□ -1.75
PTA1YAL043C YNL247WP53852 767 aaKnown RBP4.12□□□□□ -1.75
PTA1YAL043C MZM1Q03429 123 aaPredicted RBP4.12□□□□□ -1.75
PTA1YAL043C YMR155WQ03795 547 aa4.12□□□□□ -1.75
PTA1YAL043C MSH6Q03834 1242 aa4.12□□□□□ -1.75
PTA1YAL043C NHX1Q04121 633 aa4.12□□□□□ -1.75
PTA1YAL043C REH1Q06709 432 aa4.12□□□□□ -1.75
PTA1YAL043C TPO1Q07824 586 aa4.12□□□□□ -1.75
PTA1YAL043C NSE1Q07913 336 aa4.12□□□□□ -1.75
PTA1YAL043C HUA2Q12134 243 aa4.12□□□□□ -1.75
PTA1YAL043C RGS2Q99188 309 aa4.12□□□□□ -1.75
PTA1YAL043C VPS13Q07878 3144 aa4.12□□□□□ -1.75
PTA1YAL043C TRP3P00937 484 aa4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms