RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 PATL2C9JE40 543 aaKnown RBP32.03■■■□□ 2.72
VEGFA-231ENST00000640499 TBC1D8O95759 1140 aa32.03■■■□□ 2.72
VEGFA-231ENST00000640499 SDSP20132 328 aa32.03■■■□□ 2.72
VEGFA-231ENST00000640499 TRIM34Q9BYJ4 488 aa32.03■■■□□ 2.72
VEGFA-231ENST00000640499 CXCL11O14625 94 aa32.02■■■□□ 2.72
VEGFA-231ENST00000640499 CETPP11597 493 aa32.02■■■□□ 2.72
VEGFA-231ENST00000640499 NMIQ13287 307 aaPredicted RBP32.02■■■□□ 2.72
VEGFA-231ENST00000640499 GIMAP6Q6P9H5 292 aa32.02■■■□□ 2.72
VEGFA-231ENST00000640499 FAM43AQ8N2R8 423 aa32.02■■■□□ 2.72
VEGFA-231ENST00000640499 HELLSQ9NRZ9 838 aa32.02■■■□□ 2.72
VEGFA-231ENST00000640499 PTPRFP10586 1907 aa32.01■■■□□ 2.71
VEGFA-231ENST00000640499 BTBD19C9JJ37 291 aa32.01■■■□□ 2.71
VEGFA-231ENST00000640499 GNAT2P19087 354 aa32.01■■■□□ 2.71
VEGFA-231ENST00000640499 SBK1Q52WX2 424 aa32.01■■■□□ 2.71
VEGFA-231ENST00000640499 CFHR5Q9BXR6 569 aa32.01■■■□□ 2.71
VEGFA-231ENST00000640499 VPS53Q5VIR6 699 aa32■■■□□ 2.71
VEGFA-231ENST00000640499 IFNL3Q8IZI9 196 aa32■■■□□ 2.71
VEGFA-231ENST00000640499 PRDM10Q9NQV6 1147 aa32■■■□□ 2.71
VEGFA-231ENST00000640499 ZBTB21Q9ULJ3 1066 aa32■■■□□ 2.71
VEGFA-231ENST00000640499 COL13A1Q5TAT6 717 aaPredicted RBP31.99■■■□□ 2.71
VEGFA-231ENST00000640499 A0A0G2JLL6 359 aaPredicted RBP31.98■■■□□ 2.71
VEGFA-231ENST00000640499 USP17L5A8MUK1 530 aa31.98■■■□□ 2.71
VEGFA-231ENST00000640499 GH2P01242 217 aa31.98■■■□□ 2.71
VEGFA-231ENST00000640499 NEFLP07196 543 aa31.98■■■□□ 2.71
VEGFA-231ENST00000640499 ASNSP08243 561 aa31.98■■■□□ 2.71
VEGFA-231ENST00000640499 GUCY1A2P33402 732 aa31.98■■■□□ 2.71
VEGFA-231ENST00000640499 CERKLQ49MI3 558 aaPredicted RBP31.98■■■□□ 2.71
VEGFA-231ENST00000640499 MCMDC2Q4G0Z9 681 aa31.98■■■□□ 2.71
VEGFA-231ENST00000640499 GPAT2Q6NUI2 795 aa31.98■■■□□ 2.71
VEGFA-231ENST00000640499 PRRT2Q7Z6L0 340 aaPredicted RBP31.98■■■□□ 2.71
VEGFA-231ENST00000640499 ZNF589Q86UQ0 364 aaPredicted RBP31.98■■■□□ 2.71
VEGFA-231ENST00000640499 TRIM75PA6NK02 468 aa31.97■■■□□ 2.71
VEGFA-231ENST00000640499 ALDH1A1P00352 501 aa31.97■■■□□ 2.71
VEGFA-231ENST00000640499 SPP2Q13103 211 aa31.97■■■□□ 2.71
VEGFA-231ENST00000640499 DDRGK1Q96HY6 314 aa31.97■■■□□ 2.71
VEGFA-231ENST00000640499 CCDC136Q96JN2 1154 aa31.97■■■□□ 2.71
VEGFA-231ENST00000640499 WDR18Q9BV38 432 aa31.97■■■□□ 2.71
VEGFA-231ENST00000640499 GINM1Q9NU53 330 aa31.97■■■□□ 2.71
VEGFA-231ENST00000640499 ARPP21Q9UBL0 812 aaPredicted RBP31.97■■■□□ 2.71
VEGFA-231ENST00000640499 CASP8AP2Q9UKL3 1982 aa31.97■■■□□ 2.71
VEGFA-231ENST00000640499 APPP05067 770 aa31.96■■■□□ 2.71
VEGFA-231ENST00000640499 CDK8P49336 464 aa31.96■■■□□ 2.71
VEGFA-231ENST00000640499 C16orf86Q6ZW13 317 aa31.96■■■□□ 2.71
VEGFA-231ENST00000640499 ZNF280CQ8ND82 737 aa31.96■■■□□ 2.71
VEGFA-231ENST00000640499 DGKZQ13574 1117 aa31.95■■■□□ 2.71
VEGFA-231ENST00000640499 SWAP70Q9UH65 585 aa31.95■■■□□ 2.71
VEGFA-231ENST00000640499 CRHR2Q13324 411 aa31.94■■■□□ 2.7
VEGFA-231ENST00000640499 ABCB5Q2M3G0 1257 aa31.94■■■□□ 2.7
VEGFA-231ENST00000640499 OTUD7BQ6GQQ9 843 aa31.94■■■□□ 2.7
VEGFA-231ENST00000640499 TAOK2Q9UL54 1235 aa31.94■■■□□ 2.7
VEGFA-231ENST00000640499 MINDY4BA8MYZ0 360 aa31.93■■■□□ 2.7
VEGFA-231ENST00000640499 TDO2P48775 406 aa31.93■■■□□ 2.7
VEGFA-231ENST00000640499 ANKRD23Q86SG2 305 aa31.93■■■□□ 2.7
VEGFA-231ENST00000640499 IL25Q9H293 177 aa31.93■■■□□ 2.7
VEGFA-231ENST00000640499 CWC27Q6UX04 472 aaKnown RBP31.92■■■□□ 2.7
VEGFA-231ENST00000640499 TBC1D2Q9BYX2 928 aa31.92■■■□□ 2.7
VEGFA-231ENST00000640499 ROBO3Q96MS0 1386 aa31.92■■■□□ 2.7
VEGFA-231ENST00000640499 GPR25O00155 361 aa31.91■■■□□ 2.7
VEGFA-231ENST00000640499 AKR1B1P15121 316 aa31.91■■■□□ 2.7
VEGFA-231ENST00000640499 AMOTL1Q8IY63 956 aa31.91■■■□□ 2.7
VEGFA-231ENST00000640499 STK11IPQ8N1F8 1099 aa31.91■■■□□ 2.7
VEGFA-231ENST00000640499 ZCCHC17Q9NP64 241 aaKnown RBP31.91■■■□□ 2.7
VEGFA-231ENST00000640499 MYH8P13535 1937 aa31.9■■■□□ 2.7
VEGFA-231ENST00000640499 PDHXO00330 501 aa31.9■■■□□ 2.7
VEGFA-231ENST00000640499 HSPD1P10809 573 aaKnown RBP31.9■■■□□ 2.7
VEGFA-231ENST00000640499 SEPT2Q15019 361 aa31.9■■■□□ 2.7
VEGFA-231ENST00000640499 NOM1Q5C9Z4 860 aaKnown RBP31.9■■■□□ 2.7
VEGFA-231ENST00000640499 SH3D19Q5HYK7 790 aa31.9■■■□□ 2.7
VEGFA-231ENST00000640499 NACAP1Q9BZK3 213 aa31.9■■■□□ 2.7
VEGFA-231ENST00000640499 AS3MTQ9HBK9 375 aa31.9■■■□□ 2.7
VEGFA-231ENST00000640499 CCDC171Q6TFL3 1326 aa31.9■■■□□ 2.7
VEGFA-231ENST00000640499 HMGCS2P54868 508 aa31.89■■■□□ 2.7
VEGFA-231ENST00000640499 BACE1P56817 501 aa31.89■■■□□ 2.7
VEGFA-231ENST00000640499 TAF1CQ15572 869 aaPredicted RBP31.89■■■□□ 2.7
VEGFA-231ENST00000640499 ALX1Q15699 326 aa31.89■■■□□ 2.7
VEGFA-231ENST00000640499 GADL1Q6ZQY3 521 aa31.89■■■□□ 2.7
VEGFA-231ENST00000640499 FASTKD5Q7L8L6 764 aaKnown RBP31.89■■■□□ 2.7
VEGFA-231ENST00000640499 ACER1Q8TDN7 264 aa31.89■■■□□ 2.7
VEGFA-231ENST00000640499 ZNF296Q8WUU4 475 aaPredicted RBP31.89■■■□□ 2.7
VEGFA-231ENST00000640499 NAPBQ9H115 298 aa31.89■■■□□ 2.7
VEGFA-231ENST00000640499 DIAPH3Q9NSV4 1193 aa31.89■■■□□ 2.7
VEGFA-231ENST00000640499 TACC3Q9Y6A5 838 aa31.89■■■□□ 2.7
VEGFA-231ENST00000640499 LOC285556D6RIA3 1793 aa31.89■■■□□ 2.69
VEGFA-231ENST00000640499 MTMR2Q13614 643 aa31.88■■■□□ 2.69
VEGFA-231ENST00000640499 RAB3GAP1Q15042 981 aa31.88■■■□□ 2.69
VEGFA-231ENST00000640499 TREML2Q5T2D2 321 aa31.88■■■□□ 2.69
VEGFA-231ENST00000640499 SIAH1Q8IUQ4 282 aa31.88■■■□□ 2.69
VEGFA-231ENST00000640499 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.88■■■□□ 2.69
VEGFA-231ENST00000640499 CABP5Q9NP86 173 aa31.87■■■□□ 2.69
VEGFA-231ENST00000640499 ADGRA2Q96PE1 1338 aa31.86■■■□□ 2.69
VEGFA-231ENST00000640499 HIP1O00291 1037 aa31.86■■■□□ 2.69
VEGFA-231ENST00000640499 FGAP02671 866 aa31.86■■■□□ 2.69
VEGFA-231ENST00000640499 RASA1P20936 1047 aa31.86■■■□□ 2.69
VEGFA-231ENST00000640499 PPARAQ07869 468 aa31.86■■■□□ 2.69
VEGFA-231ENST00000640499 EMILIN3Q9NT22 766 aa31.86■■■□□ 2.69
VEGFA-231ENST00000640499 A0A1W2PRG0 241 aa31.85■■■□□ 2.69
VEGFA-231ENST00000640499 USP17L10C9JJH3 530 aa31.85■■■□□ 2.69
VEGFA-231ENST00000640499 MPHOSPH10O00566 681 aaKnown RBP31.85■■■□□ 2.69
VEGFA-231ENST00000640499 CHMLP26374 656 aa31.85■■■□□ 2.69
VEGFA-231ENST00000640499 ERICH6BQ5W0A0 696 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms