RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 DYNLL2Q96FJ2 89 aa6.28□□□□□ -1.4
SHMT1-211ENST00000618902 WNK4Q96J92 1243 aa6.28□□□□□ -1.4
SHMT1-211ENST00000618902 WRNIP1Q96S55 665 aa6.28□□□□□ -1.4
SHMT1-211ENST00000618902 CRNKL1Q9BZJ0 848 aaKnown RBP6.28□□□□□ -1.4
SHMT1-211ENST00000618902 EHD4Q9H223 541 aa6.28□□□□□ -1.4
SHMT1-211ENST00000618902 PICK1Q9NRD5 415 aa6.28□□□□□ -1.4
SHMT1-211ENST00000618902 RNF186Q9NXI6 227 aa6.28□□□□□ -1.4
SHMT1-211ENST00000618902 KCNH4Q9UQ05 1017 aa6.28□□□□□ -1.4
SHMT1-211ENST00000618902 SLC4A4Q9Y6R1 1079 aa6.28□□□□□ -1.4
SHMT1-211ENST00000618902 MYH1P12882 1939 aa6.28□□□□□ -1.4
SHMT1-211ENST00000618902 USP17L12C9JPN9 530 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 USP17L21D6R901 530 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 AOC2O75106 756 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 HLA-DOAP06340 250 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 ASNSP08243 561 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 SHMT1P34896 483 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 USP5P45974 858 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 LBX1P52954 281 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 GABPAQ06546 454 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 PABPC4Q13310 644 aaKnown RBP eCLIP6.27□□□□□ -1.41
SHMT1-211ENST00000618902 VGLL4Q14135 290 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 BMP2KLQ5H9B9 411 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 C12orf60Q5U649 245 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 GIMAP6Q6P9H5 292 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 CTR9Q6PD62 1173 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 CWC27Q6UX04 472 aaKnown RBP6.27□□□□□ -1.41
SHMT1-211ENST00000618902 TTC6Q86TZ1 520 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 IFNL1Q8IU54 200 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 TNS4Q8IZW8 715 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 GTF3C2Q8WUA4 911 aaPredicted RBP6.27□□□□□ -1.41
SHMT1-211ENST00000618902 ZKSCAN4Q969J2 545 aaPredicted RBP6.27□□□□□ -1.41
SHMT1-211ENST00000618902 OPTNQ96CV9 577 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 ZFYVE28Q9HCC9 887 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 HELLSQ9NRZ9 838 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 ATP8A2Q9NTI2 1148 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 SNCAIPQ9Y6H5 919 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 NAV1Q8NEY1 1877 aa6.27□□□□□ -1.41
SHMT1-211ENST00000618902 TRPA1O75762 1119 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 GNAT2P19087 354 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 PTH1RQ03431 593 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 ALX1Q15699 326 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 MCMDC2Q4G0Z9 681 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 COL13A1Q5TAT6 717 aaPredicted RBP6.26□□□□□ -1.41
SHMT1-211ENST00000618902 CTU1Q7Z7A3 348 aaKnown RBP6.26□□□□□ -1.41
SHMT1-211ENST00000618902 ANKRD23Q86SG2 305 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 ZSCAN29Q8IWY8 852 aaPredicted RBP6.26□□□□□ -1.41
SHMT1-211ENST00000618902 AMOTL1Q8IY63 956 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 SCYL3Q8IZE3 742 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 IFNL3Q8IZI9 196 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 PROCA1Q8NCQ7 364 aaPredicted RBP6.26□□□□□ -1.41
SHMT1-211ENST00000618902 ERO1AQ96HE7 468 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 MS4A4AQ96JQ5 239 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 NBPF3Q9H094 633 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 ELP3Q9H9T3 547 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 AS3MTQ9HBK9 375 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 ZNF287Q9HBT7 754 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 INCENPQ9NQS7 918 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 MCM9Q9NXL9 1143 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.26□□□□□ -1.41
SHMT1-211ENST00000618902 PNMA3Q9UL41 463 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 TAF6LQ9Y6J9 622 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 U3KPZ7 1027 aaPredicted RBP6.26□□□□□ -1.41
SHMT1-211ENST00000618902 PDE4DIPQ5VU43 2346 aa6.26□□□□□ -1.41
SHMT1-211ENST00000618902 CCDC171Q6TFL3 1326 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 C19orf81C9J6K1 198 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 PATL2C9JE40 543 aaKnown RBP6.25□□□□□ -1.41
SHMT1-211ENST00000618902 GPR25O00155 361 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 SGSM2O43147 1006 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 TLR2O60603 784 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 FKTNO75072 461 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 GDF11O95390 407 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 FGAP02671 866 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 POLR3DP05423 398 aaPredicted RBP6.25□□□□□ -1.41
SHMT1-211ENST00000618902 HSPD1P10809 573 aaKnown RBP6.25□□□□□ -1.41
SHMT1-211ENST00000618902 HOXD10P28358 340 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 GUCY1A2P33402 732 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 MKRN3Q13064 507 aaKnown RBP6.25□□□□□ -1.41
SHMT1-211ENST00000618902 GRM1Q13255 1194 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 MOGSQ13724 837 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 COL9A3Q14050 684 aaPredicted RBP6.25□□□□□ -1.41
SHMT1-211ENST00000618902 SBK1Q52WX2 424 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 PPP4R3BQ5MIZ7 849 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 TATDN1Q6P1N9 297 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 CLEC10AQ8IUN9 316 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 IL27Q8NEV9 243 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 WDR18Q9BV38 432 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.25□□□□□ -1.41
SHMT1-211ENST00000618902 TRIM34Q9BYJ4 488 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 DIAPH3Q9NSV4 1193 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 SWAP70Q9UH65 585 aa6.25□□□□□ -1.41
SHMT1-211ENST00000618902 ROBO3Q96MS0 1386 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 KIAA0100Q14667 2235 aaKnown RBP6.24□□□□□ -1.41
SHMT1-211ENST00000618902 A0A0G2JLL6 359 aaPredicted RBP6.24□□□□□ -1.41
SHMT1-211ENST00000618902 USP17L5A8MUK1 530 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 MINDY4BA8MYZ0 360 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 IRF6O14896 467 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 APPP05067 770 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 AKR1B1P15121 316 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 PTPRAP18433 802 aa6.24□□□□□ -1.41
SHMT1-211ENST00000618902 RASA1P20936 1047 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms